RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 DDX60Q8IY21 1712 aaKnown RBP21.17■□□□□ 0.98
ECHDC1-214ENST00000474289 MORC3Q14149 939 aa21.17■□□□□ 0.98
ECHDC1-214ENST00000474289 SKIDA1Q1XH10 827 aa21.17■□□□□ 0.98
ECHDC1-214ENST00000474289 SLC9C2Q5TAH2 1124 aa21.17■□□□□ 0.98
ECHDC1-214ENST00000474289 APTXQ7Z2E3 356 aaKnown RBP21.17■□□□□ 0.98
ECHDC1-214ENST00000474289 PPFIBP1Q86W92 1011 aa21.17■□□□□ 0.98
ECHDC1-214ENST00000474289 ELOA2Q8IYF1 753 aaPredicted RBP21.17■□□□□ 0.98
ECHDC1-214ENST00000474289 OSBP2Q969R2 916 aa21.17■□□□□ 0.98
ECHDC1-214ENST00000474289 VIPAS39Q9H9C1 493 aa21.17■□□□□ 0.98
ECHDC1-214ENST00000474289 HOOK1Q9UJC3 728 aaKnown RBP21.17■□□□□ 0.98
ECHDC1-214ENST00000474289 IMMTQ16891 758 aaKnown RBP21.16■□□□□ 0.98
ECHDC1-214ENST00000474289 COPS6Q7L5N1 327 aa21.16■□□□□ 0.98
ECHDC1-214ENST00000474289 MICALL1Q8N3F8 863 aa21.16■□□□□ 0.98
ECHDC1-214ENST00000474289 ACRBPQ8NEB7 543 aa21.16■□□□□ 0.98
ECHDC1-214ENST00000474289 MFAP3LO75121 409 aa21.16■□□□□ 0.98
ECHDC1-214ENST00000474289 SARSP49591 514 aaKnown RBP21.16■□□□□ 0.98
ECHDC1-214ENST00000474289 TIMM10P62072 90 aa21.16■□□□□ 0.98
ECHDC1-214ENST00000474289 MCTP2Q6DN12 878 aa21.16■□□□□ 0.98
ECHDC1-214ENST00000474289 GPATCH11Q8N954 259 aa21.16■□□□□ 0.98
ECHDC1-214ENST00000474289 EIF5P55010 431 aaKnown RBP21.15■□□□□ 0.98
ECHDC1-214ENST00000474289 SWT1Q5T5J6 900 aaKnown RBP21.15■□□□□ 0.98
ECHDC1-214ENST00000474289 NCAPH2Q6IBW4 605 aa21.15■□□□□ 0.98
ECHDC1-214ENST00000474289 TTF2Q9UNY4 1162 aaKnown RBP21.15■□□□□ 0.98
ECHDC1-214ENST00000474289 GRAMD1CQ8IYS0 662 aa21.15■□□□□ 0.98
ECHDC1-214ENST00000474289 KRI1Q8N9T8 703 aaKnown RBP21.15■□□□□ 0.98
ECHDC1-214ENST00000474289 CTCFLQ8NI51 663 aaPredicted RBP21.15■□□□□ 0.98
ECHDC1-214ENST00000474289 TICAM2Q86XR7 235 aa21.14■□□□□ 0.97
ECHDC1-214ENST00000474289 KCNH5Q8NCM2 988 aa21.14■□□□□ 0.97
ECHDC1-214ENST00000474289 ZC3H4Q9UPT8 1303 aaKnown RBP21.14■□□□□ 0.97
ECHDC1-214ENST00000474289 FGAP02671 866 aa21.14■□□□□ 0.97
ECHDC1-214ENST00000474289 CASP14P31944 242 aa21.14■□□□□ 0.97
ECHDC1-214ENST00000474289 PBX1P40424 430 aa21.14■□□□□ 0.97
ECHDC1-214ENST00000474289 AMPD2Q01433 879 aa21.14■□□□□ 0.97
ECHDC1-214ENST00000474289 RIN2Q8WYP3 895 aaPredicted RBP21.14■□□□□ 0.97
ECHDC1-214ENST00000474289 HPCAL4Q9UM19 191 aa21.14■□□□□ 0.97
ECHDC1-214ENST00000474289 MYH8P13535 1937 aa21.13■□□□□ 0.97
ECHDC1-214ENST00000474289 OVOS2A0A0G2JMS6 1433 aa21.13■□□□□ 0.97
ECHDC1-214ENST00000474289 POLR2DO15514 142 aaKnown RBP21.13■□□□□ 0.97
ECHDC1-214ENST00000474289 PLCD1P51178 756 aa21.13■□□□□ 0.97
ECHDC1-214ENST00000474289 NCOA7Q8NI08 942 aa21.13■□□□□ 0.97
ECHDC1-214ENST00000474289 KAT2BQ92831 832 aa21.13■□□□□ 0.97
ECHDC1-214ENST00000474289 PHKBQ93100 1093 aa21.13■□□□□ 0.97
ECHDC1-214ENST00000474289 SERTAD1Q9UHV2 236 aa21.13■□□□□ 0.97
ECHDC1-214ENST00000474289 MYO6Q9UM54 1294 aa21.13■□□□□ 0.97
ECHDC1-214ENST00000474289 CDHR2Q9BYE9 1310 aa21.13■□□□□ 0.97
ECHDC1-214ENST00000474289 SIPA1L3O60292 1781 aaPredicted RBP21.13■□□□□ 0.97
ECHDC1-214ENST00000474289 EXOC5O00471 708 aa21.13■□□□□ 0.97
ECHDC1-214ENST00000474289 GRIN1Q05586 938 aa21.13■□□□□ 0.97
ECHDC1-214ENST00000474289 RALYLQ86SE5 291 aaKnown RBP21.13■□□□□ 0.97
ECHDC1-214ENST00000474289 STK11IPQ8N1F8 1099 aa21.13■□□□□ 0.97
ECHDC1-214ENST00000474289 SEC31BQ9NQW1 1179 aa21.13■□□□□ 0.97
ECHDC1-214ENST00000474289 RNF216Q9NWF9 866 aaPredicted RBP21.13■□□□□ 0.97
ECHDC1-214ENST00000474289 ZMYM6O95789 1325 aa21.12■□□□□ 0.97
ECHDC1-214ENST00000474289 MAP3K15Q6ZN16 1313 aa21.12■□□□□ 0.97
ECHDC1-214ENST00000474289 IFIT1P09914 478 aaKnown RBP21.12■□□□□ 0.97
ECHDC1-214ENST00000474289 RXRAP19793 462 aa21.12■□□□□ 0.97
ECHDC1-214ENST00000474289 MMP14P50281 582 aa21.12■□□□□ 0.97
ECHDC1-214ENST00000474289 AKAP17AQ02040 695 aaKnown RBP21.12■□□□□ 0.97
ECHDC1-214ENST00000474289 ESCO1Q5FWF5 840 aa21.12■□□□□ 0.97
ECHDC1-214ENST00000474289 TRIML1Q8N9V2 468 aa21.12■□□□□ 0.97
ECHDC1-214ENST00000474289 CCDC148Q8NFR7 591 aa21.12■□□□□ 0.97
ECHDC1-214ENST00000474289 CEP89Q96ST8 783 aa21.12■□□□□ 0.97
ECHDC1-214ENST00000474289 C5P01031 1676 aa21.12■□□□□ 0.97
ECHDC1-214ENST00000474289 CPDO75976 1380 aa21.12■□□□□ 0.97
ECHDC1-214ENST00000474289 GYPCP04921 128 aa21.12■□□□□ 0.97
ECHDC1-214ENST00000474289 ARHGAP25P42331 645 aa21.12■□□□□ 0.97
ECHDC1-214ENST00000474289 FXR1P51114 621 aaKnown RBP eCLIP21.12■□□□□ 0.97
ECHDC1-214ENST00000474289 ZNF790Q6PG37 636 aa21.12■□□□□ 0.97
ECHDC1-214ENST00000474289 ATG9AQ7Z3C6 839 aa21.12■□□□□ 0.97
ECHDC1-214ENST00000474289 THEMISQ8N1K5 641 aaPredicted RBP21.12■□□□□ 0.97
ECHDC1-214ENST00000474289 SMARCC1Q92922 1105 aaPredicted RBP21.12■□□□□ 0.97
ECHDC1-214ENST00000474289 FAM107BQ9H098 131 aa21.12■□□□□ 0.97
ECHDC1-214ENST00000474289 ADD3Q9UEY8 706 aaKnown RBP21.12■□□□□ 0.97
ECHDC1-214ENST00000474289 SHOX2O60902 331 aaPredicted RBP21.11■□□□□ 0.97
ECHDC1-214ENST00000474289 ERLIN2O94905 339 aa21.11■□□□□ 0.97
ECHDC1-214ENST00000474289 ERCC5P28715 1186 aaPredicted RBP21.11■□□□□ 0.97
ECHDC1-214ENST00000474289 CCDC91Q7Z6B0 441 aa21.11■□□□□ 0.97
ECHDC1-214ENST00000474289 AXIN2Q9Y2T1 843 aa21.11■□□□□ 0.97
ECHDC1-214ENST00000474289 AFDNP55196 1824 aaKnown RBP21.11■□□□□ 0.97
ECHDC1-214ENST00000474289 GCP02774 474 aa21.1■□□□□ 0.97
ECHDC1-214ENST00000474289 FECHP22830 423 aa21.1■□□□□ 0.97
ECHDC1-214ENST00000474289 LIG3P49916 1009 aa21.1■□□□□ 0.97
ECHDC1-214ENST00000474289 METAP2P50579 478 aaKnown RBP eCLIP21.1■□□□□ 0.97
ECHDC1-214ENST00000474289 LMBR1LQ6UX01 489 aa21.1■□□□□ 0.97
ECHDC1-214ENST00000474289 ANKRD13DQ6ZTN6 518 aa21.1■□□□□ 0.97
ECHDC1-214ENST00000474289 CNGA4Q8IV77 575 aa21.1■□□□□ 0.97
ECHDC1-214ENST00000474289 MYO1AQ9UBC5 1043 aa21.1■□□□□ 0.97
ECHDC1-214ENST00000474289 ECM29Q5VYK3 1845 aa21.1■□□□□ 0.97
ECHDC1-214ENST00000474289 ATP5J2-PTCD1G3V325 749 aa21.1■□□□□ 0.97
ECHDC1-214ENST00000474289 PTCD1O75127 700 aaKnown RBP21.1■□□□□ 0.97
ECHDC1-214ENST00000474289 ERVK-24P63145 666 aa21.1■□□□□ 0.97
ECHDC1-214ENST00000474289 A0A087WZG4 1122 aa21.09■□□□□ 0.97
ECHDC1-214ENST00000474289 USP14P54578 494 aa21.09■□□□□ 0.97
ECHDC1-214ENST00000474289 GSCP56915 257 aaPredicted RBP21.09■□□□□ 0.97
ECHDC1-214ENST00000474289 TRDNQ13061 729 aa21.09■□□□□ 0.97
ECHDC1-214ENST00000474289 COG1Q8WTW3 980 aa21.09■□□□□ 0.97
ECHDC1-214ENST00000474289 WWC3Q9ULE0 1092 aa21.09■□□□□ 0.97
ECHDC1-214ENST00000474289 CDKL5O76039 1030 aa21.09■□□□□ 0.97
ECHDC1-214ENST00000474289 CCT5P48643 541 aa21.09■□□□□ 0.97
ECHDC1-214ENST00000474289 WASHC4Q2M389 1173 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms