RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 SETSIPP0DME0 302 aa8.66□□□□□ -1.02
GPNMB-209ENST00000474157 RARAP10276 462 aa8.66□□□□□ -1.02
GPNMB-209ENST00000474157 NFKB1P19838 968 aa8.66□□□□□ -1.02
GPNMB-209ENST00000474157 CASQ1P31415 396 aa8.66□□□□□ -1.02
GPNMB-209ENST00000474157 SARNPP82979 210 aaKnown RBP8.66□□□□□ -1.02
GPNMB-209ENST00000474157 XPCQ01831 940 aaPredicted RBP8.66□□□□□ -1.02
GPNMB-209ENST00000474157 ATP2B3Q16720 1220 aa8.66□□□□□ -1.02
GPNMB-209ENST00000474157 TTC39BQ5VTQ0 682 aaPredicted RBP8.66□□□□□ -1.02
GPNMB-209ENST00000474157 C1orf127Q8N9H9 656 aa8.66□□□□□ -1.02
GPNMB-209ENST00000474157 FBF1Q8TES7 1133 aa8.66□□□□□ -1.02
GPNMB-209ENST00000474157 ANKRD7Q92527 254 aa8.66□□□□□ -1.02
GPNMB-209ENST00000474157 ERCC4Q92889 916 aaPredicted RBP8.66□□□□□ -1.02
GPNMB-209ENST00000474157 TEX13AQ9BXU3 409 aaPredicted RBP8.66□□□□□ -1.02
GPNMB-209ENST00000474157 ZFYVE28Q9HCC9 887 aa8.66□□□□□ -1.02
GPNMB-209ENST00000474157 ZFATQ9P243 1243 aa8.66□□□□□ -1.02
GPNMB-209ENST00000474157 RSPH14Q9UHP6 348 aa8.66□□□□□ -1.02
GPNMB-209ENST00000474157 PTPN23Q9H3S7 1636 aa8.65□□□□□ -1.02
GPNMB-209ENST00000474157 PTCH1Q13635 1447 aa8.65□□□□□ -1.02
GPNMB-209ENST00000474157 EREGO14944 169 aa8.65□□□□□ -1.02
GPNMB-209ENST00000474157 MMP20O60882 483 aa8.65□□□□□ -1.02
GPNMB-209ENST00000474157 POLR3DP05423 398 aaPredicted RBP8.65□□□□□ -1.02
GPNMB-209ENST00000474157 NASPP49321 788 aaPredicted RBP8.65□□□□□ -1.02
GPNMB-209ENST00000474157 CHAF1AQ13111 956 aaPredicted RBP8.65□□□□□ -1.02
GPNMB-209ENST00000474157 R3HDM1Q15032 1099 aaKnown RBP8.65□□□□□ -1.02
GPNMB-209ENST00000474157 UVSSAQ2YD98 709 aa8.65□□□□□ -1.02
GPNMB-209ENST00000474157 SNRNP27Q8WVK2 155 aaKnown RBP8.65□□□□□ -1.02
GPNMB-209ENST00000474157 BHMTQ93088 406 aa8.65□□□□□ -1.02
GPNMB-209ENST00000474157 FAM161BQ96MY7 647 aa8.65□□□□□ -1.02
GPNMB-209ENST00000474157 CEP89Q96ST8 783 aa8.65□□□□□ -1.02
GPNMB-209ENST00000474157 SLKQ9H2G2 1235 aaPredicted RBP8.65□□□□□ -1.02
GPNMB-209ENST00000474157 CXorf56Q9H5V9 222 aa8.65□□□□□ -1.02
GPNMB-209ENST00000474157 CROCC2H7BZ55 1655 aa8.65□□□□□ -1.03
GPNMB-209ENST00000474157 NHSL1Q5SYE7 1610 aa8.65□□□□□ -1.03
GPNMB-209ENST00000474157 MROH1Q8NDA8 1641 aa8.65□□□□□ -1.03
GPNMB-209ENST00000474157 MAST1Q9Y2H9 1570 aa8.65□□□□□ -1.03
GPNMB-209ENST00000474157 ASXL1Q8IXJ9 1541 aa8.64□□□□□ -1.03
GPNMB-209ENST00000474157 CCDC189A1A4V9 331 aa8.64□□□□□ -1.03
GPNMB-209ENST00000474157 CYP2E1P05181 493 aaPredicted RBP8.64□□□□□ -1.03
GPNMB-209ENST00000474157 TPM3P06753 285 aa8.64□□□□□ -1.03
GPNMB-209ENST00000474157 VEGFBP49765 207 aa8.64□□□□□ -1.03
GPNMB-209ENST00000474157 CDC37Q16543 378 aaPredicted RBP8.64□□□□□ -1.03
GPNMB-209ENST00000474157 FAM182BQ5T319 152 aa8.64□□□□□ -1.03
GPNMB-209ENST00000474157 CENPQQ7L2Z9 268 aaPredicted RBP8.64□□□□□ -1.03
GPNMB-209ENST00000474157 SUGP1Q8IWZ8 645 aaKnown RBP8.64□□□□□ -1.03
GPNMB-209ENST00000474157 SDR16C5Q8N3Y7 309 aa8.64□□□□□ -1.03
GPNMB-209ENST00000474157 NANOS1Q8WY41 292 aaKnown RBP8.64□□□□□ -1.03
GPNMB-209ENST00000474157 CCDC74AQ96AQ1 378 aa8.64□□□□□ -1.03
GPNMB-209ENST00000474157 SUFUQ9UMX1 484 aa8.64□□□□□ -1.03
GPNMB-209ENST00000474157 DCCP43146 1447 aa8.63□□□□□ -1.03
GPNMB-209ENST00000474157 PIK3R4Q99570 1358 aa8.63□□□□□ -1.03
GPNMB-209ENST00000474157 A0A1B0GUL7 405 aa8.63□□□□□ -1.03
GPNMB-209ENST00000474157 H0YHG0 523 aa8.63□□□□□ -1.03
GPNMB-209ENST00000474157 CES1P23141 567 aa8.63□□□□□ -1.03
GPNMB-209ENST00000474157 IRS1P35568 1242 aa8.63□□□□□ -1.03
GPNMB-209ENST00000474157 IRX1P78414 480 aaPredicted RBP8.63□□□□□ -1.03
GPNMB-209ENST00000474157 CTBSQ01459 385 aa8.63□□□□□ -1.03
GPNMB-209ENST00000474157 KIAA2012Q0VF49 1180 aa8.63□□□□□ -1.03
GPNMB-209ENST00000474157 PSMD2Q13200 908 aa8.63□□□□□ -1.03
GPNMB-209ENST00000474157 MYBPC2Q14324 1141 aa8.63□□□□□ -1.03
GPNMB-209ENST00000474157 ZRSR2Q15696 482 aaKnown RBP8.63□□□□□ -1.03
GPNMB-209ENST00000474157 GBP4Q96PP9 640 aa8.63□□□□□ -1.03
GPNMB-209ENST00000474157 NPHS2Q9NP85 383 aa8.63□□□□□ -1.03
GPNMB-209ENST00000474157 KANSL3Q9P2N6 904 aa8.63□□□□□ -1.03
GPNMB-209ENST00000474157 NXF1Q9UBU9 619 aaKnown RBP8.63□□□□□ -1.03
GPNMB-209ENST00000474157 DDX41Q9UJV9 622 aaKnown RBP8.63□□□□□ -1.03
GPNMB-209ENST00000474157 BCL9LQ86UU0 1499 aa8.63□□□□□ -1.03
GPNMB-209ENST00000474157 KANK1Q14678 1352 aa8.62□□□□□ -1.03
GPNMB-209ENST00000474157 NPC1L1Q9UHC9 1359 aa8.62□□□□□ -1.03
GPNMB-209ENST00000474157 PIK3C2BO00750 1634 aa8.62□□□□□ -1.03
GPNMB-209ENST00000474157 PHF20L1A8MW92 1017 aa8.62□□□□□ -1.03
GPNMB-209ENST00000474157 C1QTNF8P60827 252 aa8.62□□□□□ -1.03
GPNMB-209ENST00000474157 DAB2P98082 770 aa8.62□□□□□ -1.03
GPNMB-209ENST00000474157 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.62□□□□□ -1.03
GPNMB-209ENST00000474157 ZC3H12AQ5D1E8 599 aaKnown RBP8.62□□□□□ -1.03
GPNMB-209ENST00000474157 JAKMIP3Q5VZ66 844 aa8.62□□□□□ -1.03
GPNMB-209ENST00000474157 PI16Q6UXB8 463 aa8.62□□□□□ -1.03
GPNMB-209ENST00000474157 TMC4Q7Z404 712 aa8.62□□□□□ -1.03
GPNMB-209ENST00000474157 TXLNBQ8N3L3 684 aa8.62□□□□□ -1.03
GPNMB-209ENST00000474157 OR13H1Q8NG92 308 aa8.62□□□□□ -1.03
GPNMB-209ENST00000474157 MRS2Q9HD23 443 aa8.62□□□□□ -1.03
GPNMB-209ENST00000474157 JRKLQ9Y4A0 524 aa8.62□□□□□ -1.03
GPNMB-209ENST00000474157 MYOM3Q5VTT5 1437 aa8.62□□□□□ -1.03
GPNMB-209ENST00000474157 PSAPP07602 524 aa8.61□□□□□ -1.03
GPNMB-209ENST00000474157 ATP2B1P20020 1258 aa8.61□□□□□ -1.03
GPNMB-209ENST00000474157 VAMP1P23763 118 aa8.61□□□□□ -1.03
GPNMB-209ENST00000474157 GNA15P30679 374 aa8.61□□□□□ -1.03
GPNMB-209ENST00000474157 CD151P48509 253 aa8.61□□□□□ -1.03
GPNMB-209ENST00000474157 RRP1P56182 461 aaKnown RBP8.61□□□□□ -1.03
GPNMB-209ENST00000474157 MRPL58Q14197 206 aaKnown RBP8.61□□□□□ -1.03
GPNMB-209ENST00000474157 HSP90B2PQ58FF3 399 aa8.61□□□□□ -1.03
GPNMB-209ENST00000474157 GALNT12Q8IXK2 581 aa8.61□□□□□ -1.03
GPNMB-209ENST00000474157 KRT222Q8N1A0 295 aa8.61□□□□□ -1.03
GPNMB-209ENST00000474157 ZNF513Q8N8E2 541 aaPredicted RBP8.61□□□□□ -1.03
GPNMB-209ENST00000474157 EPS8L3Q8TE67 593 aaKnown RBP8.61□□□□□ -1.03
GPNMB-209ENST00000474157 PMEPA1Q969W9 287 aa8.61□□□□□ -1.03
GPNMB-209ENST00000474157 TMX4Q9H1E5 349 aaPredicted RBP8.61□□□□□ -1.03
GPNMB-209ENST00000474157 TLR7Q9NYK1 1049 aaKnown RBP8.61□□□□□ -1.03
GPNMB-209ENST00000474157 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.61□□□□□ -1.03
GPNMB-209ENST00000474157 MST1RQ04912 1400 aa8.61□□□□□ -1.03
GPNMB-209ENST00000474157 ANKRD18BA2A2Z9 1011 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms