RNA–Protein interactions for RNA: ENST00000474144.5

TMEM54-204, Transcript of transmembrane protein 54, humanhuman

TSL 3

Gene TMEM54, Length 748 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-204ENST00000474144 MLLT1Q03111 559 aaPredicted RBP24.26■■□□□ 1.47
TMEM54-204ENST00000474144 GPAT2Q6NUI2 795 aa24.26■■□□□ 1.47
TMEM54-204ENST00000474144 MIGA1Q8NAN2 632 aa24.26■■□□□ 1.47
TMEM54-204ENST00000474144 PTPN22Q9Y2R2 807 aa24.26■■□□□ 1.47
TMEM54-204ENST00000474144 FLT1P17948 1338 aa24.26■■□□□ 1.47
TMEM54-204ENST00000474144 IGSF3O75054 1194 aa24.25■■□□□ 1.47
TMEM54-204ENST00000474144 RAB11FIP3O75154 756 aa24.25■■□□□ 1.47
TMEM54-204ENST00000474144 IFIT2P09913 472 aaKnown RBP24.25■■□□□ 1.47
TMEM54-204ENST00000474144 ARHGAP39Q9C0H5 1083 aa24.25■■□□□ 1.47
TMEM54-204ENST00000474144 A0A0G2JLL6 359 aaPredicted RBP24.24■■□□□ 1.47
TMEM54-204ENST00000474144 PRRT2Q7Z6L0 340 aaPredicted RBP24.24■■□□□ 1.47
TMEM54-204ENST00000474144 SAP30BPQ9UHR5 308 aaKnown RBP24.24■■□□□ 1.47
TMEM54-204ENST00000474144 CPA4Q9UI42 421 aa24.24■■□□□ 1.47
TMEM54-204ENST00000474144 CENPFP49454 3210 aa24.24■■□□□ 1.47
TMEM54-204ENST00000474144 ATAD5Q96QE3 1844 aa24.24■■□□□ 1.47
TMEM54-204ENST00000474144 PTPRFP10586 1907 aa24.23■■□□□ 1.47
TMEM54-204ENST00000474144 TRIM75PA6NK02 468 aa24.23■■□□□ 1.47
TMEM54-204ENST00000474144 ECM2O94769 699 aaPredicted RBP24.23■■□□□ 1.47
TMEM54-204ENST00000474144 PI4KBQ9UBF8 816 aa24.23■■□□□ 1.47
TMEM54-204ENST00000474144 PALD1Q9ULE6 856 aa24.23■■□□□ 1.47
TMEM54-204ENST00000474144 ADGRA2Q96PE1 1338 aa24.22■■□□□ 1.47
TMEM54-204ENST00000474144 MAP3K12Q12852 859 aa24.22■■□□□ 1.47
TMEM54-204ENST00000474144 SLC4A8Q2Y0W8 1093 aa24.22■■□□□ 1.47
TMEM54-204ENST00000474144 C17orf99Q6UX52 265 aa24.22■■□□□ 1.47
TMEM54-204ENST00000474144 GADL1Q6ZQY3 521 aa24.22■■□□□ 1.47
TMEM54-204ENST00000474144 DNAJC2Q99543 621 aaKnown RBP24.22■■□□□ 1.47
TMEM54-204ENST00000474144 DHX36Q9H2U1 1008 aaKnown RBP24.22■■□□□ 1.47
TMEM54-204ENST00000474144 DNAJC18Q9H819 358 aa24.22■■□□□ 1.47
TMEM54-204ENST00000474144 CYP2C8P10632 490 aa24.21■■□□□ 1.47
TMEM54-204ENST00000474144 CAP2P40123 477 aa24.21■■□□□ 1.47
TMEM54-204ENST00000474144 LACTBP83111 547 aaPredicted RBP24.21■■□□□ 1.47
TMEM54-204ENST00000474144 EDC3Q96F86 508 aaKnown RBP24.21■■□□□ 1.47
TMEM54-204ENST00000474144 HERC5Q9UII4 1024 aaKnown RBP24.21■■□□□ 1.47
TMEM54-204ENST00000474144 GOLIM4O00461 696 aa24.2■■□□□ 1.46
TMEM54-204ENST00000474144 SMARCA5O60264 1052 aaPredicted RBP24.2■■□□□ 1.46
TMEM54-204ENST00000474144 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.2■■□□□ 1.46
TMEM54-204ENST00000474144 CTGFP29279 349 aa24.19■■□□□ 1.46
TMEM54-204ENST00000474144 JAG1P78504 1218 aa24.19■■□□□ 1.46
TMEM54-204ENST00000474144 TTF1Q15361 905 aaPredicted RBP24.19■■□□□ 1.46
TMEM54-204ENST00000474144 FASTKD5Q7L8L6 764 aaKnown RBP24.19■■□□□ 1.46
TMEM54-204ENST00000474144 MYH1P12882 1939 aa24.18■■□□□ 1.46
TMEM54-204ENST00000474144 USP5P45974 858 aa24.18■■□□□ 1.46
TMEM54-204ENST00000474144 SPP2Q13103 211 aa24.18■■□□□ 1.46
TMEM54-204ENST00000474144 SHROOM1Q2M3G4 852 aaPredicted RBP24.18■■□□□ 1.46
TMEM54-204ENST00000474144 METTL16Q86W50 562 aaKnown RBP24.18■■□□□ 1.46
TMEM54-204ENST00000474144 PARK7Q99497 189 aaKnown RBP24.18■■□□□ 1.46
TMEM54-204ENST00000474144 RIOK1Q9BRS2 568 aaKnown RBP24.18■■□□□ 1.46
TMEM54-204ENST00000474144 BOLA2Q9H3K6 86 aa24.18■■□□□ 1.46
TMEM54-204ENST00000474144 PTCH2Q9Y6C5 1203 aa24.18■■□□□ 1.46
TMEM54-204ENST00000474144 PDE6AP16499 860 aa24.17■■□□□ 1.46
TMEM54-204ENST00000474144 KIF22Q14807 665 aa24.17■■□□□ 1.46
TMEM54-204ENST00000474144 SLC9C2Q5TAH2 1124 aa24.17■■□□□ 1.46
TMEM54-204ENST00000474144 FOXP4Q8IVH2 680 aaPredicted RBP24.17■■□□□ 1.46
TMEM54-204ENST00000474144 CRACR2BQ8N4Y2 399 aaPredicted RBP24.17■■□□□ 1.46
TMEM54-204ENST00000474144 LRRCC1Q9C099 1032 aa24.17■■□□□ 1.46
TMEM54-204ENST00000474144 ARHGEF6Q15052 776 aa24.16■■□□□ 1.46
TMEM54-204ENST00000474144 TREML2Q5T2D2 321 aa24.16■■□□□ 1.46
TMEM54-204ENST00000474144 YTHDC1Q96MU7 727 aaKnown RBP24.16■■□□□ 1.46
TMEM54-204ENST00000474144 ZNF532Q9HCE3 1301 aa24.15■■□□□ 1.46
TMEM54-204ENST00000474144 MAGEB6P1A0A0J9YX57 407 aa24.15■■□□□ 1.46
TMEM54-204ENST00000474144 USP17L5A8MUK1 530 aa24.15■■□□□ 1.46
TMEM54-204ENST00000474144 GDF11O95390 407 aa24.15■■□□□ 1.46
TMEM54-204ENST00000474144 ATP5JP18859 108 aa24.15■■□□□ 1.46
TMEM54-204ENST00000474144 SLFNL1Q499Z3 407 aa24.15■■□□□ 1.46
TMEM54-204ENST00000474144 ZNF280CQ8ND82 737 aa24.15■■□□□ 1.46
TMEM54-204ENST00000474144 TNRC18O15417 2968 aaPredicted RBP24.15■■□□□ 1.46
TMEM54-204ENST00000474144 BRCA2P51587 3418 aa24.15■■□□□ 1.46
TMEM54-204ENST00000474144 TCRBV5S4A2TA0A5A2 114 aa24.14■■□□□ 1.45
TMEM54-204ENST00000474144 HLA-DOAP06340 250 aa24.14■■□□□ 1.45
TMEM54-204ENST00000474144 BCRP11274 1271 aa24.14■■□□□ 1.45
TMEM54-204ENST00000474144 PSMC4P43686 418 aa24.14■■□□□ 1.45
TMEM54-204ENST00000474144 TMED8Q6PL24 325 aaPredicted RBP24.14■■□□□ 1.45
TMEM54-204ENST00000474144 CERS3Q8IU89 383 aa24.14■■□□□ 1.45
TMEM54-204ENST00000474144 TRIM47Q96LD4 638 aa24.14■■□□□ 1.45
TMEM54-204ENST00000474144 TRIM34Q9BYJ4 488 aa24.14■■□□□ 1.45
TMEM54-204ENST00000474144 PAG1Q9NWQ8 432 aa24.14■■□□□ 1.45
TMEM54-204ENST00000474144 AGTPBP1Q9UPW5 1226 aa24.14■■□□□ 1.45
TMEM54-204ENST00000474144 SLC45A1Q9Y2W3 748 aa24.14■■□□□ 1.45
TMEM54-204ENST00000474144 HMGCS2P54868 508 aa24.13■■□□□ 1.45
TMEM54-204ENST00000474144 ARMC5Q96C12 935 aa24.13■■□□□ 1.45
TMEM54-204ENST00000474144 HAUS7Q99871 368 aa24.13■■□□□ 1.45
TMEM54-204ENST00000474144 LOC285556D6RIA3 1793 aa24.13■■□□□ 1.45
TMEM54-204ENST00000474144 POTEFA5A3E0 1075 aa24.12■■□□□ 1.45
TMEM54-204ENST00000474144 CHGBP05060 677 aa24.12■■□□□ 1.45
TMEM54-204ENST00000474144 RRP1P56182 461 aaKnown RBP24.12■■□□□ 1.45
TMEM54-204ENST00000474144 DCTPP1Q9H773 170 aa24.12■■□□□ 1.45
TMEM54-204ENST00000474144 PCDHB15Q9Y5E8 787 aa24.12■■□□□ 1.45
TMEM54-204ENST00000474144 DDX60LQ5H9U9 1706 aaKnown RBP24.11■■□□□ 1.45
TMEM54-204ENST00000474144 EVX2Q03828 476 aa24.11■■□□□ 1.45
TMEM54-204ENST00000474144 LCORLQ8N3X6 602 aa24.11■■□□□ 1.45
TMEM54-204ENST00000474144 PROCA1Q8NCQ7 364 aaPredicted RBP24.11■■□□□ 1.45
TMEM54-204ENST00000474144 TBC1D2Q9BYX2 928 aa24.11■■□□□ 1.45
TMEM54-204ENST00000474144 AS3MTQ9HBK9 375 aa24.11■■□□□ 1.45
TMEM54-204ENST00000474144 NAV1Q8NEY1 1877 aa24.11■■□□□ 1.45
TMEM54-204ENST00000474144 FMNL1O95466 1100 aaPredicted RBP24.1■■□□□ 1.45
TMEM54-204ENST00000474144 ASNSP08243 561 aa24.1■■□□□ 1.45
TMEM54-204ENST00000474144 OSBPP22059 807 aa24.1■■□□□ 1.45
TMEM54-204ENST00000474144 PLCD1P51178 756 aa24.1■■□□□ 1.45
TMEM54-204ENST00000474144 MTMR2Q13614 643 aa24.1■■□□□ 1.45
TMEM54-204ENST00000474144 SLC9C1Q4G0N8 1177 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms