RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 HOXB1P14653 301 aaPredicted RBP6.44□□□□□ -1.38
SNRNP40-204ENST00000474025 PRDX5P30044 214 aa6.44□□□□□ -1.38
SNRNP40-204ENST00000474025 FLT3LGP49771 235 aa6.44□□□□□ -1.38
SNRNP40-204ENST00000474025 IRF5Q13568 498 aa6.44□□□□□ -1.38
SNRNP40-204ENST00000474025 TMEM92Q6UXU6 159 aa6.44□□□□□ -1.38
SNRNP40-204ENST00000474025 ZFPM1Q8IX07 1006 aa6.44□□□□□ -1.38
SNRNP40-204ENST00000474025 KLHDC4Q8TBB5 520 aa6.44□□□□□ -1.38
SNRNP40-204ENST00000474025 WDR66Q8TBY9 1149 aa6.44□□□□□ -1.38
SNRNP40-204ENST00000474025 PXYLP1Q8TE99 480 aa6.44□□□□□ -1.38
SNRNP40-204ENST00000474025 DEFB118Q96PH6 123 aa6.44□□□□□ -1.38
SNRNP40-204ENST00000474025 CRISPLD2Q9H0B8 497 aa6.44□□□□□ -1.38
SNRNP40-204ENST00000474025 PAK6Q9NQU5 681 aaPredicted RBP6.44□□□□□ -1.38
SNRNP40-204ENST00000474025 STXBP5LQ9Y2K9 1186 aa6.44□□□□□ -1.38
SNRNP40-204ENST00000474025 SALL2Q9Y467 1007 aaPredicted RBP6.44□□□□□ -1.38
SNRNP40-204ENST00000474025 STK24Q9Y6E0 443 aa6.44□□□□□ -1.38
SNRNP40-204ENST00000474025 MGAMO43451 1857 aa6.44□□□□□ -1.38
SNRNP40-204ENST00000474025 RFX7Q2KHR2 1363 aa6.44□□□□□ -1.38
SNRNP40-204ENST00000474025 XIRP2A4UGR9 3374 aa6.43□□□□□ -1.38
SNRNP40-204ENST00000474025 STK25O00506 426 aa6.43□□□□□ -1.38
SNRNP40-204ENST00000474025 IFIT1P09914 478 aaKnown RBP6.43□□□□□ -1.38
SNRNP40-204ENST00000474025 SLC5A1P13866 664 aa6.43□□□□□ -1.38
SNRNP40-204ENST00000474025 FASTKD5Q7L8L6 764 aaKnown RBP6.43□□□□□ -1.38
SNRNP40-204ENST00000474025 SCYL3Q8IZE3 742 aa6.43□□□□□ -1.38
SNRNP40-204ENST00000474025 ZNF710Q8N1W2 664 aa6.43□□□□□ -1.38
SNRNP40-204ENST00000474025 LPIN2Q92539 896 aa6.43□□□□□ -1.38
SNRNP40-204ENST00000474025 HS3ST6Q96QI5 342 aa6.43□□□□□ -1.38
SNRNP40-204ENST00000474025 GDF15Q99988 308 aa6.43□□□□□ -1.38
SNRNP40-204ENST00000474025 STAP2Q9UGK3 403 aa6.43□□□□□ -1.38
SNRNP40-204ENST00000474025 SLC45A1Q9Y2W3 748 aa6.43□□□□□ -1.38
SNRNP40-204ENST00000474025 AFG3L2Q9Y4W6 797 aa6.43□□□□□ -1.38
SNRNP40-204ENST00000474025 ZHX2Q9Y6X8 837 aa6.43□□□□□ -1.38
SNRNP40-204ENST00000474025 DOCK2Q92608 1830 aa6.43□□□□□ -1.38
SNRNP40-204ENST00000474025 PTPRFP10586 1907 aa6.42□□□□□ -1.38
SNRNP40-204ENST00000474025 ALPK3Q96L96 1907 aa6.42□□□□□ -1.38
SNRNP40-204ENST00000474025 MYH13Q9UKX3 1938 aa6.42□□□□□ -1.38
SNRNP40-204ENST00000474025 TTC28Q96AY4 2481 aa6.42□□□□□ -1.38
SNRNP40-204ENST00000474025 TNPO2O14787 897 aaKnown RBP6.42□□□□□ -1.38
SNRNP40-204ENST00000474025 TFRCP02786 760 aaKnown RBP6.42□□□□□ -1.38
SNRNP40-204ENST00000474025 LDHBP07195 334 aaKnown RBP6.42□□□□□ -1.38
SNRNP40-204ENST00000474025 SLURP2P0DP57 97 aa6.42□□□□□ -1.38
SNRNP40-204ENST00000474025 PTPRAP18433 802 aa6.42□□□□□ -1.38
SNRNP40-204ENST00000474025 BMP8BP34820 402 aa6.42□□□□□ -1.38
SNRNP40-204ENST00000474025 ZEB1P37275 1124 aaPredicted RBP6.42□□□□□ -1.38
SNRNP40-204ENST00000474025 RFX5P48382 616 aaPredicted RBP6.42□□□□□ -1.38
SNRNP40-204ENST00000474025 RGS3P49796 1198 aa6.42□□□□□ -1.38
SNRNP40-204ENST00000474025 MAP3K10Q02779 954 aa6.42□□□□□ -1.38
SNRNP40-204ENST00000474025 GADL1Q6ZQY3 521 aa6.42□□□□□ -1.38
SNRNP40-204ENST00000474025 SH3BP5LQ7L8J4 393 aa6.42□□□□□ -1.38
SNRNP40-204ENST00000474025 NECAB2Q7Z6G3 386 aa6.42□□□□□ -1.38
SNRNP40-204ENST00000474025 SMCR8Q8TEV9 937 aaPredicted RBP6.42□□□□□ -1.38
SNRNP40-204ENST00000474025 DIS3LQ8TF46 1054 aaKnown RBP6.42□□□□□ -1.38
SNRNP40-204ENST00000474025 PAWRQ96IZ0 340 aaKnown RBP6.42□□□□□ -1.38
SNRNP40-204ENST00000474025 IDI2Q9BXS1 227 aa6.42□□□□□ -1.38
SNRNP40-204ENST00000474025 ZSWIM6Q9HCJ5 1215 aa6.42□□□□□ -1.38
SNRNP40-204ENST00000474025 PICK1Q9NRD5 415 aa6.42□□□□□ -1.38
SNRNP40-204ENST00000474025 USP40Q9NVE5 1235 aa6.42□□□□□ -1.38
SNRNP40-204ENST00000474025 GAKO14976 1311 aa6.42□□□□□ -1.38
SNRNP40-204ENST00000474025 SALL1Q9NSC2 1324 aa6.42□□□□□ -1.38
SNRNP40-204ENST00000474025 AK9Q5TCS8 1911 aa6.42□□□□□ -1.38
SNRNP40-204ENST00000474025 DOCK3Q8IZD9 2030 aa6.42□□□□□ -1.38
SNRNP40-204ENST00000474025 PHIPQ8WWQ0 1821 aa6.41□□□□□ -1.38
SNRNP40-204ENST00000474025 FAM205CA6NFA0 338 aa6.41□□□□□ -1.38
SNRNP40-204ENST00000474025 TRIM75PA6NK02 468 aa6.41□□□□□ -1.38
SNRNP40-204ENST00000474025 EYA2O00167 538 aa6.41□□□□□ -1.38
SNRNP40-204ENST00000474025 ENTPD3O75355 529 aa6.41□□□□□ -1.38
SNRNP40-204ENST00000474025 FAM110CQ1W6H9 321 aa6.41□□□□□ -1.38
SNRNP40-204ENST00000474025 TREML2Q5T2D2 321 aa6.41□□□□□ -1.38
SNRNP40-204ENST00000474025 ATG9AQ7Z3C6 839 aa6.41□□□□□ -1.38
SNRNP40-204ENST00000474025 CCDC84Q86UT8 332 aaPredicted RBP6.41□□□□□ -1.38
SNRNP40-204ENST00000474025 C7orf61Q8IZ16 206 aa6.41□□□□□ -1.38
SNRNP40-204ENST00000474025 COA7Q96BR5 231 aa6.41□□□□□ -1.38
SNRNP40-204ENST00000474025 MFRPQ9BY79 579 aa6.41□□□□□ -1.38
SNRNP40-204ENST00000474025 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.41□□□□□ -1.38
SNRNP40-204ENST00000474025 USP44Q9H0E7 712 aa6.41□□□□□ -1.38
SNRNP40-204ENST00000474025 MRS2Q9HD23 443 aa6.41□□□□□ -1.38
SNRNP40-204ENST00000474025 DDX4Q9NQI0 724 aaKnown RBP6.41□□□□□ -1.38
SNRNP40-204ENST00000474025 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.41□□□□□ -1.38
SNRNP40-204ENST00000474025 ZMYND8Q9ULU4 1186 aaPredicted RBP6.41□□□□□ -1.38
SNRNP40-204ENST00000474025 AGTPBP1Q9UPW5 1226 aa6.41□□□□□ -1.38
SNRNP40-204ENST00000474025 PTPRCP08575 1304 aa6.41□□□□□ -1.38
SNRNP40-204ENST00000474025 DOCK1Q14185 1865 aa6.41□□□□□ -1.38
SNRNP40-204ENST00000474025 CHD9Q3L8U1 2897 aa6.4□□□□□ -1.38
SNRNP40-204ENST00000474025 LOC285556D6RIA3 1793 aa6.4□□□□□ -1.38
SNRNP40-204ENST00000474025 POTEB3A0JP26 581 aa6.4□□□□□ -1.38
SNRNP40-204ENST00000474025 DDTLA6NHG4 134 aaPredicted RBP6.4□□□□□ -1.38
SNRNP40-204ENST00000474025 SEMA3EO15041 775 aa6.4□□□□□ -1.38
SNRNP40-204ENST00000474025 CTNND1O60716 968 aaKnown RBP6.4□□□□□ -1.38
SNRNP40-204ENST00000474025 HMGCRP04035 888 aa6.4□□□□□ -1.38
SNRNP40-204ENST00000474025 MAGEA10P43363 369 aaPredicted RBP6.4□□□□□ -1.38
SNRNP40-204ENST00000474025 PHKA1P46020 1223 aa6.4□□□□□ -1.38
SNRNP40-204ENST00000474025 ATP2B3Q16720 1220 aa6.4□□□□□ -1.38
SNRNP40-204ENST00000474025 LRIT3Q3SXY7 679 aa6.4□□□□□ -1.38
SNRNP40-204ENST00000474025 POTEBQ6S5H4 581 aa6.4□□□□□ -1.38
SNRNP40-204ENST00000474025 Q7L0L9 218 aa6.4□□□□□ -1.38
SNRNP40-204ENST00000474025 SPNS2Q8IVW8 549 aa6.4□□□□□ -1.38
SNRNP40-204ENST00000474025 ZSCAN29Q8IWY8 852 aaPredicted RBP6.4□□□□□ -1.38
SNRNP40-204ENST00000474025 MRPL50Q8N5N7 158 aaKnown RBP6.4□□□□□ -1.38
SNRNP40-204ENST00000474025 DEFB123Q8N688 67 aa6.4□□□□□ -1.38
SNRNP40-204ENST00000474025 ANKRD13CQ8N6S4 541 aa6.4□□□□□ -1.38
SNRNP40-204ENST00000474025 ANKLE1Q8NAG6 615 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms