RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 PCSK7Q16549 785 aa7.23□□□□□ -1.25
ATPAF1-204ENST00000474020 MTHFSDQ2M296 383 aaKnown RBP7.23□□□□□ -1.25
ATPAF1-204ENST00000474020 C16orf46Q6P387 395 aa7.23□□□□□ -1.25
ATPAF1-204ENST00000474020 TREML1Q86YW5 311 aa7.23□□□□□ -1.25
ATPAF1-204ENST00000474020 ANKRD44Q8N8A2 993 aa7.23□□□□□ -1.25
ATPAF1-204ENST00000474020 CLP1Q92989 425 aaKnown RBP7.23□□□□□ -1.25
ATPAF1-204ENST00000474020 NPHP4O75161 1426 aaPredicted RBP7.23□□□□□ -1.25
ATPAF1-204ENST00000474020 CRB1P82279 1406 aa7.23□□□□□ -1.25
ATPAF1-204ENST00000474020 PEAK1Q9H792 1746 aa7.23□□□□□ -1.25
ATPAF1-204ENST00000474020 PIK3C2AO00443 1686 aa7.22□□□□□ -1.25
ATPAF1-204ENST00000474020 USP54Q70EL1 1684 aa7.22□□□□□ -1.25
ATPAF1-204ENST00000474020 OPLAHO14841 1288 aa7.22□□□□□ -1.25
ATPAF1-204ENST00000474020 LILRB5O75023 590 aa7.22□□□□□ -1.25
ATPAF1-204ENST00000474020 PTMSP20962 102 aa7.22□□□□□ -1.25
ATPAF1-204ENST00000474020 BAG6P46379 1132 aa7.22□□□□□ -1.25
ATPAF1-204ENST00000474020 TAF7Q15545 349 aaPredicted RBP7.22□□□□□ -1.25
ATPAF1-204ENST00000474020 AMOTQ4VCS5 1084 aa7.22□□□□□ -1.25
ATPAF1-204ENST00000474020 PLEKHO1Q53GL0 409 aaPredicted RBP7.22□□□□□ -1.25
ATPAF1-204ENST00000474020 IP6K1Q92551 441 aa7.22□□□□□ -1.25
ATPAF1-204ENST00000474020 LTV1Q96GA3 475 aaPredicted RBP7.22□□□□□ -1.25
ATPAF1-204ENST00000474020 C1orf115Q9H7X2 142 aa7.22□□□□□ -1.25
ATPAF1-204ENST00000474020 ZFATQ9P243 1243 aa7.22□□□□□ -1.25
ATPAF1-204ENST00000474020 RTCBQ9Y3I0 505 aaKnown RBP7.22□□□□□ -1.25
ATPAF1-204ENST00000474020 DLG5Q8TDM6 1919 aa7.22□□□□□ -1.25
ATPAF1-204ENST00000474020 ZBTB7CA1YPR0 619 aa7.21□□□□□ -1.26
ATPAF1-204ENST00000474020 ADAM23O75077 832 aa7.21□□□□□ -1.26
ATPAF1-204ENST00000474020 PTCD1O75127 700 aaKnown RBP7.21□□□□□ -1.26
ATPAF1-204ENST00000474020 EGFRP00533 1210 aa7.21□□□□□ -1.26
ATPAF1-204ENST00000474020 GNAI2P04899 355 aa7.21□□□□□ -1.26
ATPAF1-204ENST00000474020 HSP90AB1P08238 724 aaKnown RBP7.21□□□□□ -1.26
ATPAF1-204ENST00000474020 HOXB7P09629 217 aa7.21□□□□□ -1.26
ATPAF1-204ENST00000474020 C1orf141Q5JVX7 400 aa7.21□□□□□ -1.26
ATPAF1-204ENST00000474020 NUTM2GQ5VZR2 741 aa7.21□□□□□ -1.26
ATPAF1-204ENST00000474020 SLC4A10Q6U841 1118 aa7.21□□□□□ -1.26
ATPAF1-204ENST00000474020 KRT25Q7Z3Z0 450 aa7.21□□□□□ -1.26
ATPAF1-204ENST00000474020 KRTAP1-3Q8IUG1 177 aa7.21□□□□□ -1.26
ATPAF1-204ENST00000474020 SAP130Q9H0E3 1048 aa7.21□□□□□ -1.26
ATPAF1-204ENST00000474020 DCTPP1Q9H773 170 aa7.21□□□□□ -1.26
ATPAF1-204ENST00000474020 JPH1Q9HDC5 661 aaPredicted RBP7.21□□□□□ -1.26
ATPAF1-204ENST00000474020 NAGPAQ9UK23 515 aa7.21□□□□□ -1.26
ATPAF1-204ENST00000474020 USP19O94966 1318 aa7.21□□□□□ -1.26
ATPAF1-204ENST00000474020 MSH6P52701 1360 aa7.2□□□□□ -1.26
ATPAF1-204ENST00000474020 NCAPD2Q15021 1401 aa7.2□□□□□ -1.26
ATPAF1-204ENST00000474020 PXDNLA1KZ92 1463 aa7.2□□□□□ -1.26
ATPAF1-204ENST00000474020 REC8O95072 547 aa7.2□□□□□ -1.26
ATPAF1-204ENST00000474020 RARAP10276 462 aa7.2□□□□□ -1.26
ATPAF1-204ENST00000474020 BRD2P25440 801 aaKnown RBP7.2□□□□□ -1.26
ATPAF1-204ENST00000474020 TARSP26639 723 aaKnown RBP7.2□□□□□ -1.26
ATPAF1-204ENST00000474020 RBM25P49756 843 aaKnown RBP7.2□□□□□ -1.26
ATPAF1-204ENST00000474020 TEFQ10587 303 aa7.2□□□□□ -1.26
ATPAF1-204ENST00000474020 TRIM28Q13263 835 aaKnown RBP7.2□□□□□ -1.26
ATPAF1-204ENST00000474020 PSAPL1Q6NUJ1 521 aa7.2□□□□□ -1.26
ATPAF1-204ENST00000474020 DHX32Q7L7V1 743 aaKnown RBP7.2□□□□□ -1.26
ATPAF1-204ENST00000474020 ETFBKMTQ8IXQ9 262 aa7.2□□□□□ -1.26
ATPAF1-204ENST00000474020 NUDT8Q8WV74 236 aa7.2□□□□□ -1.26
ATPAF1-204ENST00000474020 MKNK1Q9BUB5 465 aa7.2□□□□□ -1.26
ATPAF1-204ENST00000474020 CHMP5Q9NZZ3 219 aa7.2□□□□□ -1.26
ATPAF1-204ENST00000474020 USP20Q9Y2K6 914 aa7.2□□□□□ -1.26
ATPAF1-204ENST00000474020 MED1Q15648 1581 aaPredicted RBP7.2□□□□□ -1.26
ATPAF1-204ENST00000474020 SASH3O75995 380 aa7.19□□□□□ -1.26
ATPAF1-204ENST00000474020 APBA3O96018 575 aa7.19□□□□□ -1.26
ATPAF1-204ENST00000474020 MCCP23508 829 aa7.19□□□□□ -1.26
ATPAF1-204ENST00000474020 GPLD1P80108 840 aa7.19□□□□□ -1.26
ATPAF1-204ENST00000474020 TTC22Q5TAA0 569 aa7.19□□□□□ -1.26
ATPAF1-204ENST00000474020 CEP85Q6P2H3 762 aa7.19□□□□□ -1.26
ATPAF1-204ENST00000474020 RGL4Q8IZJ4 473 aa7.19□□□□□ -1.26
ATPAF1-204ENST00000474020 CMTR1Q8N1G2 835 aaKnown RBP7.19□□□□□ -1.26
ATPAF1-204ENST00000474020 TRPM4Q8TD43 1214 aa7.19□□□□□ -1.26
ATPAF1-204ENST00000474020 SNX21Q969T3 373 aa7.19□□□□□ -1.26
ATPAF1-204ENST00000474020 NACC1Q96RE7 527 aa7.19□□□□□ -1.26
ATPAF1-204ENST00000474020 SLKQ9H2G2 1235 aaPredicted RBP7.19□□□□□ -1.26
ATPAF1-204ENST00000474020 FRRS1LQ9P0K9 344 aa7.19□□□□□ -1.26
ATPAF1-204ENST00000474020 CHD2O14647 1828 aaKnown RBP7.19□□□□□ -1.26
ATPAF1-204ENST00000474020 ZBTB42B2RXF5 422 aa7.18□□□□□ -1.26
ATPAF1-204ENST00000474020 GOLGA6L22H0YM25 854 aa7.18□□□□□ -1.26
ATPAF1-204ENST00000474020 FAM229AH3BQW9 127 aa7.18□□□□□ -1.26
ATPAF1-204ENST00000474020 K7ELQ4 463 aaPredicted RBP7.18□□□□□ -1.26
ATPAF1-204ENST00000474020 TNFRSF10BO14763 440 aa7.18□□□□□ -1.26
ATPAF1-204ENST00000474020 XYLBO75191 536 aa7.18□□□□□ -1.26
ATPAF1-204ENST00000474020 RGS9O75916 674 aaPredicted RBP7.18□□□□□ -1.26
ATPAF1-204ENST00000474020 UBTFL1P0CB47 393 aaPredicted RBP7.18□□□□□ -1.26
ATPAF1-204ENST00000474020 ATF3P18847 181 aa7.18□□□□□ -1.26
ATPAF1-204ENST00000474020 ARID4AP29374 1257 aaPredicted RBP7.18□□□□□ -1.26
ATPAF1-204ENST00000474020 AFF1P51825 1210 aaKnown RBP7.18□□□□□ -1.26
ATPAF1-204ENST00000474020 RABEP1Q15276 862 aa7.18□□□□□ -1.26
ATPAF1-204ENST00000474020 HSP90AB4PQ58FF6 505 aa7.18□□□□□ -1.26
ATPAF1-204ENST00000474020 AKAP4Q5JQC9 854 aa7.18□□□□□ -1.26
ATPAF1-204ENST00000474020 TRAPPC3LQ5T215 181 aa7.18□□□□□ -1.26
ATPAF1-204ENST00000474020 ZNF530Q6P9A1 599 aaPredicted RBP7.18□□□□□ -1.26
ATPAF1-204ENST00000474020 CAPN12Q6ZSI9 719 aa7.18□□□□□ -1.26
ATPAF1-204ENST00000474020 FAM35AQ86V20 835 aa7.18□□□□□ -1.26
ATPAF1-204ENST00000474020 CCDC82Q8N4S0 544 aa7.18□□□□□ -1.26
ATPAF1-204ENST00000474020 GBP4Q96PP9 640 aa7.18□□□□□ -1.26
ATPAF1-204ENST00000474020 SRCIN1Q9C0H9 1055 aa7.18□□□□□ -1.26
ATPAF1-204ENST00000474020 SLAIN2Q9P270 581 aa7.18□□□□□ -1.26
ATPAF1-204ENST00000474020 KCNMB2Q9Y691 235 aa7.18□□□□□ -1.26
ATPAF1-204ENST00000474020 LRRC37A3O60309 1634 aa7.18□□□□□ -1.26
ATPAF1-204ENST00000474020 KIF1AQ12756 1690 aa7.18□□□□□ -1.26
ATPAF1-204ENST00000474020 OVOS2A0A0G2JMS6 1433 aa7.18□□□□□ -1.26
ATPAF1-204ENST00000474020 CPB1P15086 417 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms