RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 CILPO75339 1184 aa6.19□□□□□ -1.42
BRCA1-212ENST00000473961 WNT11O96014 354 aa6.19□□□□□ -1.42
BRCA1-212ENST00000473961 CYP11A1P05108 521 aa6.19□□□□□ -1.42
BRCA1-212ENST00000473961 ESRRAP11474 423 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-212ENST00000473961 BMP6P22004 513 aa6.19□□□□□ -1.42
BRCA1-212ENST00000473961 SERINC3Q13530 473 aa6.19□□□□□ -1.42
BRCA1-212ENST00000473961 GRIK5Q16478 980 aa6.19□□□□□ -1.42
BRCA1-212ENST00000473961 ZNF746Q6NUN9 644 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-212ENST00000473961 INTS5Q6P9B9 1019 aaKnown RBP6.19□□□□□ -1.42
BRCA1-212ENST00000473961 BNC2Q6ZN30 1099 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-212ENST00000473961 VN1R5Q7Z5H4 357 aa6.19□□□□□ -1.42
BRCA1-212ENST00000473961 DCAF11Q8TEB1 546 aa6.19□□□□□ -1.42
BRCA1-212ENST00000473961 AKTIPQ9H8T0 292 aa6.19□□□□□ -1.42
BRCA1-212ENST00000473961 RAXQ9Y2V3 346 aa6.19□□□□□ -1.42
BRCA1-212ENST00000473961 PPM1GO15355 546 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-212ENST00000473961 TLR3O15455 904 aaKnown RBP6.18□□□□□ -1.42
BRCA1-212ENST00000473961 ALX3O95076 343 aa6.18□□□□□ -1.42
BRCA1-212ENST00000473961 ETFBP38117 255 aa6.18□□□□□ -1.42
BRCA1-212ENST00000473961 CRKP46108 304 aa6.18□□□□□ -1.42
BRCA1-212ENST00000473961 PIP4K2BP78356 416 aa6.18□□□□□ -1.42
BRCA1-212ENST00000473961 RPL6Q02878 288 aaKnown RBP6.18□□□□□ -1.42
BRCA1-212ENST00000473961 SEPT6Q14141 434 aa6.18□□□□□ -1.42
BRCA1-212ENST00000473961 ZNF423Q2M1K9 1284 aa6.18□□□□□ -1.42
BRCA1-212ENST00000473961 LRRFIP1Q32MZ4 808 aaKnown RBP6.18□□□□□ -1.42
BRCA1-212ENST00000473961 GDF6Q6KF10 455 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-212ENST00000473961 ANKRD13AQ8IZ07 590 aa6.18□□□□□ -1.42
BRCA1-212ENST00000473961 ACSBG1Q96GR2 724 aa6.18□□□□□ -1.42
BRCA1-212ENST00000473961 LPIN3Q9BQK8 851 aa6.18□□□□□ -1.42
BRCA1-212ENST00000473961 CORO1BQ9BR76 489 aa6.18□□□□□ -1.42
BRCA1-212ENST00000473961 PIF1Q9H611 641 aa6.18□□□□□ -1.42
BRCA1-212ENST00000473961 ACTR10Q9NZ32 417 aa6.18□□□□□ -1.42
BRCA1-212ENST00000473961 PPT2Q9UMR5 302 aa6.18□□□□□ -1.42
BRCA1-212ENST00000473961 TRIM33Q9UPN9 1127 aa6.18□□□□□ -1.42
BRCA1-212ENST00000473961 FAM221AA4D161 298 aa6.17□□□□□ -1.42
BRCA1-212ENST00000473961 DEAF1O75398 565 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-212ENST00000473961 GSTP1P09211 210 aaKnown RBP6.17□□□□□ -1.42
BRCA1-212ENST00000473961 GIPRP48546 466 aa6.17□□□□□ -1.42
BRCA1-212ENST00000473961 IFRD2Q12894 506 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-212ENST00000473961 TAF7LQ5H9L4 462 aa6.17□□□□□ -1.42
BRCA1-212ENST00000473961 SHDQ96IW2 340 aa6.17□□□□□ -1.42
BRCA1-212ENST00000473961 ZNRF3Q9ULT6 936 aa6.17□□□□□ -1.42
BRCA1-212ENST00000473961 TBX22Q9Y458 520 aa6.17□□□□□ -1.42
BRCA1-212ENST00000473961 PPME1Q9Y570 386 aa6.17□□□□□ -1.42
BRCA1-212ENST00000473961 PCDHB5Q9Y5E4 795 aa6.17□□□□□ -1.42
BRCA1-212ENST00000473961 DLL1O00548 723 aa6.16□□□□□ -1.42
BRCA1-212ENST00000473961 KLF4O43474 513 aa6.16□□□□□ -1.42
BRCA1-212ENST00000473961 HSD3B2P26439 372 aa6.16□□□□□ -1.42
BRCA1-212ENST00000473961 GRIK1P39086 918 aa6.16□□□□□ -1.42
BRCA1-212ENST00000473961 GSTM4Q03013 218 aa6.16□□□□□ -1.42
BRCA1-212ENST00000473961 ZNF252P-AS1Q0IIN9 211 aa6.16□□□□□ -1.42
BRCA1-212ENST00000473961 C19orf57Q0VDD7 668 aa6.16□□□□□ -1.42
BRCA1-212ENST00000473961 FXNQ16595 210 aa6.16□□□□□ -1.42
BRCA1-212ENST00000473961 MAP1SQ66K74 1059 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-212ENST00000473961 CCDC81Q6ZN84 652 aa6.16□□□□□ -1.42
BRCA1-212ENST00000473961 Q6ZS46 218 aa6.16□□□□□ -1.42
BRCA1-212ENST00000473961 GK5Q6ZS86 529 aa6.16□□□□□ -1.42
BRCA1-212ENST00000473961 ABI1Q8IZP0 508 aa6.16□□□□□ -1.42
BRCA1-212ENST00000473961 HNRNPLLQ8WVV9 542 aaKnown RBP6.16□□□□□ -1.42
BRCA1-212ENST00000473961 KCNB2Q92953 911 aa6.16□□□□□ -1.42
BRCA1-212ENST00000473961 DEPDC7Q96QD5 511 aa6.16□□□□□ -1.42
BRCA1-212ENST00000473961 TMX1Q9H3N1 280 aa6.16□□□□□ -1.42
BRCA1-212ENST00000473961 BRMS1Q9HCU9 246 aa6.16□□□□□ -1.42
BRCA1-212ENST00000473961 OSGEPQ9NPF4 335 aa6.16□□□□□ -1.42
BRCA1-212ENST00000473961 KRT82Q9NSB4 513 aa6.16□□□□□ -1.42
BRCA1-212ENST00000473961 SLC12A7Q9Y666 1083 aa6.16□□□□□ -1.42
BRCA1-212ENST00000473961 PRR19A6NJB7 356 aa6.15□□□□□ -1.42
BRCA1-212ENST00000473961 F8W735 103 aaPredicted RBP6.15□□□□□ -1.42
BRCA1-212ENST00000473961 SMAD7O15105 426 aaKnown RBP6.15□□□□□ -1.42
BRCA1-212ENST00000473961 EPHA1P21709 976 aa6.15□□□□□ -1.42
BRCA1-212ENST00000473961 MAP4K3Q8IVH8 894 aa6.15□□□□□ -1.42
BRCA1-212ENST00000473961 IL22RA1Q8N6P7 574 aa6.15□□□□□ -1.42
BRCA1-212ENST00000473961 RBBP8NLQ8NC74 664 aaPredicted RBP6.15□□□□□ -1.42
BRCA1-212ENST00000473961 SLC7A3Q8WY07 619 aa6.15□□□□□ -1.42
BRCA1-212ENST00000473961 GAL3ST3Q96A11 431 aa6.15□□□□□ -1.42
BRCA1-212ENST00000473961 KRTAP9-8Q9BYQ0 159 aa6.15□□□□□ -1.42
BRCA1-212ENST00000473961 CCDC113Q9H0I3 377 aa6.15□□□□□ -1.42
BRCA1-212ENST00000473961 ATE1O95260 518 aa6.14□□□□□ -1.43
BRCA1-212ENST00000473961 PDE4BQ07343 736 aa6.14□□□□□ -1.43
BRCA1-212ENST00000473961 POU4F3Q15319 338 aa6.14□□□□□ -1.43
BRCA1-212ENST00000473961 HDXQ7Z353 690 aa6.14□□□□□ -1.43
BRCA1-212ENST00000473961 WFDC8Q8IUA0 241 aa6.14□□□□□ -1.43
BRCA1-212ENST00000473961 C19orf47Q8N9M1 422 aaKnown RBP6.14□□□□□ -1.43
BRCA1-212ENST00000473961 FBXO27Q8NI29 283 aa6.14□□□□□ -1.43
BRCA1-212ENST00000473961 TM9SF2Q99805 663 aa6.14□□□□□ -1.43
BRCA1-212ENST00000473961 SLKQ9H2G2 1235 aaPredicted RBP6.14□□□□□ -1.43
BRCA1-212ENST00000473961 EHMT1Q9H9B1 1298 aa6.14□□□□□ -1.43
BRCA1-212ENST00000473961 SH2B1Q9NRF2 756 aaPredicted RBP6.14□□□□□ -1.43
BRCA1-212ENST00000473961 SNTG2Q9NY99 539 aa6.14□□□□□ -1.43
BRCA1-212ENST00000473961 PCDHB14Q9Y5E9 798 aa6.14□□□□□ -1.43
BRCA1-212ENST00000473961 TACC3Q9Y6A5 838 aa6.14□□□□□ -1.43
BRCA1-212ENST00000473961 SNCAIPQ9Y6H5 919 aa6.14□□□□□ -1.43
BRCA1-212ENST00000473961 SOX1O00570 391 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-212ENST00000473961 CHMP4BP1P59074 171 aa6.13□□□□□ -1.43
BRCA1-212ENST00000473961 DDR2Q16832 855 aa6.13□□□□□ -1.43
BRCA1-212ENST00000473961 RNF187Q5TA31 235 aaPredicted RBP6.13□□□□□ -1.43
BRCA1-212ENST00000473961 PDZD3Q86UT5 571 aa6.13□□□□□ -1.43
BRCA1-212ENST00000473961 TMEM130Q8N3G9 435 aa6.13□□□□□ -1.43
BRCA1-212ENST00000473961 KLHL23Q8NBE8 558 aa6.13□□□□□ -1.43
BRCA1-212ENST00000473961 GRIN3AQ8TCU5 1115 aa6.13□□□□□ -1.43
BRCA1-212ENST00000473961 ELMO3Q96BJ8 720 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms