RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.74□□□□□ -1.65
CCDC39-203ENST00000473854 FAM155AB1AL88 458 aaPredicted RBP4.74□□□□□ -1.65
CCDC39-203ENST00000473854 FZD6O60353 706 aa4.74□□□□□ -1.65
CCDC39-203ENST00000473854 C22orf34Q6ZV56 151 aa4.74□□□□□ -1.65
CCDC39-203ENST00000473854 TMEM151BQ8IW70 566 aa4.74□□□□□ -1.65
CCDC39-203ENST00000473854 IRF2BPLQ9H1B7 796 aa4.74□□□□□ -1.65
CCDC39-203ENST00000473854 ZC3H12AQ5D1E8 599 aaKnown RBP4.73□□□□□ -1.65
CCDC39-203ENST00000473854 THAP5Q7Z6K1 395 aa4.73□□□□□ -1.65
CCDC39-203ENST00000473854 CXorf38Q8TB03 319 aa4.73□□□□□ -1.65
CCDC39-203ENST00000473854 KCNB2Q92953 911 aa4.73□□□□□ -1.65
CCDC39-203ENST00000473854 EMILIN2Q9BXX0 1053 aa4.73□□□□□ -1.65
CCDC39-203ENST00000473854 ABCB6Q9NP58 842 aa4.73□□□□□ -1.65
CCDC39-203ENST00000473854 TMEM39AQ9NV64 488 aa4.73□□□□□ -1.65
CCDC39-203ENST00000473854 RTEL1Q9NZ71 1219 aa4.73□□□□□ -1.65
CCDC39-203ENST00000473854 TMEM238LA0A1B0GVL6 79 aa4.72□□□□□ -1.65
CCDC39-203ENST00000473854 RFXAPO00287 272 aa4.72□□□□□ -1.65
CCDC39-203ENST00000473854 SEMA7AO75326 666 aa4.72□□□□□ -1.65
CCDC39-203ENST00000473854 BMP7P18075 431 aa4.72□□□□□ -1.65
CCDC39-203ENST00000473854 FKBP4Q02790 459 aaKnown RBP eCLIP4.72□□□□□ -1.65
CCDC39-203ENST00000473854 TCERG1LQ5VWI1 586 aa4.72□□□□□ -1.65
CCDC39-203ENST00000473854 CDC37L1Q7L3B6 337 aa4.72□□□□□ -1.65
CCDC39-203ENST00000473854 MFSD4AQ8N468 514 aa4.72□□□□□ -1.65
CCDC39-203ENST00000473854 MYLIPQ8WY64 445 aa4.72□□□□□ -1.65
CCDC39-203ENST00000473854 PBXIP1Q96AQ6 731 aa4.72□□□□□ -1.65
CCDC39-203ENST00000473854 ATP13A1Q9HD20 1204 aa4.72□□□□□ -1.65
CCDC39-203ENST00000473854 PICK1Q9NRD5 415 aa4.72□□□□□ -1.65
CCDC39-203ENST00000473854 SEMA3GQ9NS98 782 aa4.72□□□□□ -1.65
CCDC39-203ENST00000473854 SLAIN2Q9P270 581 aa4.72□□□□□ -1.65
CCDC39-203ENST00000473854 A0A0G2JLL6 359 aaPredicted RBP4.71□□□□□ -1.66
CCDC39-203ENST00000473854 CPNE3O75131 537 aaKnown RBP4.71□□□□□ -1.66
CCDC39-203ENST00000473854 ZNF385BQ569K4 471 aa4.71□□□□□ -1.66
CCDC39-203ENST00000473854 ZNF746Q6NUN9 644 aaPredicted RBP4.71□□□□□ -1.66
CCDC39-203ENST00000473854 BAHD1Q8TBE0 780 aaPredicted RBP4.71□□□□□ -1.66
CCDC39-203ENST00000473854 COX4I2Q96KJ9 171 aa4.71□□□□□ -1.66
CCDC39-203ENST00000473854 HSPA12BQ96MM6 686 aa4.71□□□□□ -1.66
CCDC39-203ENST00000473854 NPHS2Q9NP85 383 aa4.71□□□□□ -1.66
CCDC39-203ENST00000473854 PPP4R2Q9NY27 417 aa4.71□□□□□ -1.66
CCDC39-203ENST00000473854 GPN3Q9UHW5 284 aaPredicted RBP4.71□□□□□ -1.66
CCDC39-203ENST00000473854 CNTNAP4Q9C0A0 1308 aa4.71□□□□□ -1.66
CCDC39-203ENST00000473854 FANCGO15287 622 aa4.7□□□□□ -1.66
CCDC39-203ENST00000473854 XRCC5P13010 732 aaKnown RBP4.7□□□□□ -1.66
CCDC39-203ENST00000473854 MTMR3Q13615 1198 aa4.7□□□□□ -1.66
CCDC39-203ENST00000473854 SFRP5Q5T4F7 317 aa4.7□□□□□ -1.66
CCDC39-203ENST00000473854 PRRT2Q7Z6L0 340 aaPredicted RBP4.7□□□□□ -1.66
CCDC39-203ENST00000473854 TTC6Q86TZ1 520 aa4.7□□□□□ -1.66
CCDC39-203ENST00000473854 PDZD3Q86UT5 571 aa4.7□□□□□ -1.66
CCDC39-203ENST00000473854 IRF2BP1Q8IU81 584 aa4.7□□□□□ -1.66
CCDC39-203ENST00000473854 ACSBG1Q96GR2 724 aa4.7□□□□□ -1.66
CCDC39-203ENST00000473854 KCNC2Q96PR1 638 aa4.7□□□□□ -1.66
CCDC39-203ENST00000473854 SLAMF8Q9P0V8 285 aa4.7□□□□□ -1.66
CCDC39-203ENST00000473854 PEX10O60683 326 aa4.69□□□□□ -1.66
CCDC39-203ENST00000473854 GADD45BO75293 160 aaPredicted RBP4.69□□□□□ -1.66
CCDC39-203ENST00000473854 SASH1O94885 1247 aa4.69□□□□□ -1.66
CCDC39-203ENST00000473854 EOMESO95936 686 aa4.69□□□□□ -1.66
CCDC39-203ENST00000473854 ADRB1P08588 477 aa4.69□□□□□ -1.66
CCDC39-203ENST00000473854 ZNF157P51786 506 aaPredicted RBP4.69□□□□□ -1.66
CCDC39-203ENST00000473854 FAAP100Q0VG06 881 aa4.69□□□□□ -1.66
CCDC39-203ENST00000473854 PDE3BQ13370 1112 aa4.69□□□□□ -1.66
CCDC39-203ENST00000473854 CDKAL1Q5VV42 579 aa4.69□□□□□ -1.66
CCDC39-203ENST00000473854 SULF2Q8IWU5 870 aa4.69□□□□□ -1.66
CCDC39-203ENST00000473854 SLC6A17Q9H1V8 727 aa4.69□□□□□ -1.66
CCDC39-203ENST00000473854 DNAJC25Q9H1X3 360 aa4.69□□□□□ -1.66
CCDC39-203ENST00000473854 CCDC87Q9NVE4 849 aa4.69□□□□□ -1.66
CCDC39-203ENST00000473854 TMEM59LQ9UK28 342 aa4.69□□□□□ -1.66
CCDC39-203ENST00000473854 CNOT6Q9ULM6 557 aaKnown RBP4.69□□□□□ -1.66
CCDC39-203ENST00000473854 TPX2Q9ULW0 747 aaKnown RBP4.69□□□□□ -1.66
CCDC39-203ENST00000473854 H3BS24 57 aa4.68□□□□□ -1.66
CCDC39-203ENST00000473854 PSPNO60542 156 aa4.68□□□□□ -1.66
CCDC39-203ENST00000473854 LRIG2O94898 1065 aa4.68□□□□□ -1.66
CCDC39-203ENST00000473854 HPXP02790 462 aa4.68□□□□□ -1.66
CCDC39-203ENST00000473854 CELA3BP08861 270 aa4.68□□□□□ -1.66
CCDC39-203ENST00000473854 ARNTP27540 789 aa4.68□□□□□ -1.66
CCDC39-203ENST00000473854 DLG4P78352 724 aa4.68□□□□□ -1.66
CCDC39-203ENST00000473854 DTHD1Q6ZMT9 781 aa4.68□□□□□ -1.66
CCDC39-203ENST00000473854 TMPRSS7Q7RTY8 843 aa4.68□□□□□ -1.66
CCDC39-203ENST00000473854 LILRA2Q8N149 483 aa4.68□□□□□ -1.66
CCDC39-203ENST00000473854 MARCH10Q8NA82 808 aaPredicted RBP4.68□□□□□ -1.66
CCDC39-203ENST00000473854 BRPF3Q9ULD4 1205 aa4.68□□□□□ -1.66
CCDC39-203ENST00000473854 NME2P22392 152 aa4.67□□□□□ -1.66
CCDC39-203ENST00000473854 CYP7A1P22680 504 aa4.67□□□□□ -1.66
CCDC39-203ENST00000473854 USPL1Q5W0Q7 1092 aa4.67□□□□□ -1.66
CCDC39-203ENST00000473854 MAP1SQ66K74 1059 aaPredicted RBP4.67□□□□□ -1.66
CCDC39-203ENST00000473854 ARMCX6Q7L4S7 300 aa4.67□□□□□ -1.66
CCDC39-203ENST00000473854 TMPRSS5Q9H3S3 457 aa4.67□□□□□ -1.66
CCDC39-203ENST00000473854 KCNK12Q9HB15 430 aa4.67□□□□□ -1.66
CCDC39-203ENST00000473854 SAMM50Q9Y512 469 aa4.67□□□□□ -1.66
CCDC39-203ENST00000473854 SLC24A1O60721 1099 aa4.66□□□□□ -1.66
CCDC39-203ENST00000473854 SSFA2P28290 1259 aa4.66□□□□□ -1.66
CCDC39-203ENST00000473854 KIR3DL1P43629 444 aa4.66□□□□□ -1.66
CCDC39-203ENST00000473854 PPM1JQ5JR12 505 aa4.66□□□□□ -1.66
CCDC39-203ENST00000473854 ZBTB37Q5TC79 503 aa4.66□□□□□ -1.66
CCDC39-203ENST00000473854 SCARA3Q6AZY7 606 aa4.66□□□□□ -1.66
CCDC39-203ENST00000473854 TMEM132EQ6IEE7 984 aa4.66□□□□□ -1.66
CCDC39-203ENST00000473854 ZNF507Q8TCN5 953 aa4.66□□□□□ -1.66
CCDC39-203ENST00000473854 GPBAR1Q8TDU6 330 aa4.66□□□□□ -1.66
CCDC39-203ENST00000473854 ST14Q9Y5Y6 855 aa4.66□□□□□ -1.66
CCDC39-203ENST00000473854 CAPN6Q9Y6Q1 641 aa4.66□□□□□ -1.66
CCDC39-203ENST00000473854 TEX51A0A1B0GUA7 166 aa4.65□□□□□ -1.67
CCDC39-203ENST00000473854 NDUFB5O43674 189 aa4.65□□□□□ -1.67
CCDC39-203ENST00000473854 MFSD2AQ8NA29 543 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms