RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 IL1RAPL2Q9NP60 686 aa15.82■□□□□ 0.12
SHROOM3-204ENST00000473602 A0A0C4DFX4 3053 aa15.81■□□□□ 0.12
SHROOM3-204ENST00000473602 NPM3O75607 178 aaKnown RBP15.81■□□□□ 0.12
SHROOM3-204ENST00000473602 CYP2E1P05181 493 aaPredicted RBP15.81■□□□□ 0.12
SHROOM3-204ENST00000473602 GJB1P08034 283 aa15.81■□□□□ 0.12
SHROOM3-204ENST00000473602 CCL5P13501 91 aa15.81■□□□□ 0.12
SHROOM3-204ENST00000473602 NFIAQ12857 509 aa15.81■□□□□ 0.12
SHROOM3-204ENST00000473602 FOCADQ5VW36 1801 aa15.81■□□□□ 0.12
SHROOM3-204ENST00000473602 TMED8Q6PL24 325 aaPredicted RBP15.81■□□□□ 0.12
SHROOM3-204ENST00000473602 UBE2Q1Q7Z7E8 422 aa15.81■□□□□ 0.12
SHROOM3-204ENST00000473602 RNF208Q9H0X6 261 aa15.81■□□□□ 0.12
SHROOM3-204ENST00000473602 SNRKQ9NRH2 765 aa15.81■□□□□ 0.12
SHROOM3-204ENST00000473602 BIN2Q9UBW5 565 aaPredicted RBP15.81■□□□□ 0.12
SHROOM3-204ENST00000473602 FAM198AQ9UFP1 575 aa15.81■□□□□ 0.12
SHROOM3-204ENST00000473602 CDK5RAP2Q96SN8 1893 aa15.8■□□□□ 0.12
SHROOM3-204ENST00000473602 MYPNQ86TC9 1320 aa15.8■□□□□ 0.12
SHROOM3-204ENST00000473602 IFIT2P09913 472 aaKnown RBP15.8■□□□□ 0.12
SHROOM3-204ENST00000473602 ZAP70P43403 619 aa15.8■□□□□ 0.12
SHROOM3-204ENST00000473602 TCP10Q12799 353 aa15.8■□□□□ 0.12
SHROOM3-204ENST00000473602 NAA16Q6N069 864 aaPredicted RBP15.8■□□□□ 0.12
SHROOM3-204ENST00000473602 NOL10Q9BSC4 688 aaKnown RBP15.8■□□□□ 0.12
SHROOM3-204ENST00000473602 HTATIP2Q9BUP3 242 aa15.8■□□□□ 0.12
SHROOM3-204ENST00000473602 KCNH4Q9UQ05 1017 aa15.8■□□□□ 0.12
SHROOM3-204ENST00000473602 COL2A1P02458 1487 aaPredicted RBP15.79■□□□□ 0.12
SHROOM3-204ENST00000473602 ADGRA2Q96PE1 1338 aa15.79■□□□□ 0.12
SHROOM3-204ENST00000473602 RGS3P49796 1198 aa15.79■□□□□ 0.12
SHROOM3-204ENST00000473602 RHBDL3P58872 404 aa15.79■□□□□ 0.12
SHROOM3-204ENST00000473602 MOGSQ13724 837 aa15.79■□□□□ 0.12
SHROOM3-204ENST00000473602 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.79■□□□□ 0.12
SHROOM3-204ENST00000473602 ZNF112Q9UJU3 913 aa15.79■□□□□ 0.12
SHROOM3-204ENST00000473602 NR2E3Q9Y5X4 410 aa15.79■□□□□ 0.12
SHROOM3-204ENST00000473602 ZSWIM8A7E2V4 1837 aa15.79■□□□□ 0.12
SHROOM3-204ENST00000473602 APBB1O00213 710 aa15.78■□□□□ 0.12
SHROOM3-204ENST00000473602 BAG3O95817 575 aa15.78■□□□□ 0.12
SHROOM3-204ENST00000473602 PLCG2P16885 1265 aa15.78■□□□□ 0.12
SHROOM3-204ENST00000473602 UBXN2AP68543 259 aa15.78■□□□□ 0.12
SHROOM3-204ENST00000473602 PRKCZQ05513 592 aa15.78■□□□□ 0.12
SHROOM3-204ENST00000473602 LRRCC1Q9C099 1032 aa15.78■□□□□ 0.12
SHROOM3-204ENST00000473602 PRO3102Q9H379 93 aa15.78■□□□□ 0.12
SHROOM3-204ENST00000473602 ATRNL1Q5VV63 1379 aa15.77■□□□□ 0.12
SHROOM3-204ENST00000473602 CYP2C8P10632 490 aa15.77■□□□□ 0.12
SHROOM3-204ENST00000473602 FCGRTP55899 365 aa15.77■□□□□ 0.12
SHROOM3-204ENST00000473602 TTF1Q15361 905 aaPredicted RBP15.77■□□□□ 0.12
SHROOM3-204ENST00000473602 CERS3Q8IU89 383 aa15.77■□□□□ 0.12
SHROOM3-204ENST00000473602 U2AF1L4Q8WU68 220 aaKnown RBP15.77■□□□□ 0.12
SHROOM3-204ENST00000473602 PARK7Q99497 189 aaKnown RBP15.77■□□□□ 0.12
SHROOM3-204ENST00000473602 PIH1D3Q9NQM4 214 aaKnown RBP15.77■□□□□ 0.12
SHROOM3-204ENST00000473602 GABRQQ9UN88 632 aa15.77■□□□□ 0.12
SHROOM3-204ENST00000473602 LAMA3Q16787 3333 aa15.76■□□□□ 0.11
SHROOM3-204ENST00000473602 CXCL11O14625 94 aa15.76■□□□□ 0.11
SHROOM3-204ENST00000473602 IDH1O75874 414 aaKnown RBP15.76■□□□□ 0.11
SHROOM3-204ENST00000473602 FARP2O94887 1054 aaPredicted RBP15.76■□□□□ 0.11
SHROOM3-204ENST00000473602 BCRP11274 1271 aa15.76■□□□□ 0.11
SHROOM3-204ENST00000473602 PPP4CP60510 307 aa15.76■□□□□ 0.11
SHROOM3-204ENST00000473602 MAP3K12Q12852 859 aa15.76■□□□□ 0.11
SHROOM3-204ENST00000473602 GPAT2Q6NUI2 795 aa15.76■□□□□ 0.11
SHROOM3-204ENST00000473602 SLC17A8Q8NDX2 589 aa15.76■□□□□ 0.11
SHROOM3-204ENST00000473602 UNC93B1Q9H1C4 597 aa15.76■□□□□ 0.11
SHROOM3-204ENST00000473602 DCTPP1Q9H773 170 aa15.76■□□□□ 0.11
SHROOM3-204ENST00000473602 DDX4Q9NQI0 724 aaKnown RBP15.76■□□□□ 0.11
SHROOM3-204ENST00000473602 MYH7P12883 1935 aa15.75■□□□□ 0.11
SHROOM3-204ENST00000473602 DLL1O00548 723 aa15.75■□□□□ 0.11
SHROOM3-204ENST00000473602 SGPL1O95470 568 aa15.75■□□□□ 0.11
SHROOM3-204ENST00000473602 PICALMQ13492 652 aa15.75■□□□□ 0.11
SHROOM3-204ENST00000473602 AAMPQ13685 434 aa15.75■□□□□ 0.11
SHROOM3-204ENST00000473602 NOL9Q5SY16 702 aaKnown RBP15.75■□□□□ 0.11
SHROOM3-204ENST00000473602 ZSCAN29Q8IWY8 852 aaPredicted RBP15.75■□□□□ 0.11
SHROOM3-204ENST00000473602 ZFPM1Q8IX07 1006 aa15.75■□□□□ 0.11
SHROOM3-204ENST00000473602 SLAIN1Q8ND83 568 aa15.75■□□□□ 0.11
SHROOM3-204ENST00000473602 DOCK1Q14185 1865 aa15.75■□□□□ 0.11
SHROOM3-204ENST00000473602 COL6A3P12111 3177 aa15.75■□□□□ 0.11
SHROOM3-204ENST00000473602 ATP5JP18859 108 aa15.74■□□□□ 0.11
SHROOM3-204ENST00000473602 HOXD11P31277 338 aaPredicted RBP15.74■□□□□ 0.11
SHROOM3-204ENST00000473602 MAP3K10Q02779 954 aa15.74■□□□□ 0.11
SHROOM3-204ENST00000473602 SH3BP5LQ7L8J4 393 aa15.74■□□□□ 0.11
SHROOM3-204ENST00000473602 TEX11Q8IYF3 940 aa15.74■□□□□ 0.11
SHROOM3-204ENST00000473602 OSBPL5Q9H0X9 879 aaPredicted RBP15.74■□□□□ 0.11
SHROOM3-204ENST00000473602 AATFQ9NY61 560 aaKnown RBP eCLIP15.74■□□□□ 0.11
SHROOM3-204ENST00000473602 DDTLA6NHG4 134 aaPredicted RBP15.73■□□□□ 0.11
SHROOM3-204ENST00000473602 ADCY3O60266 1144 aa15.73■□□□□ 0.11
SHROOM3-204ENST00000473602 TBC1D12O60347 775 aa15.73■□□□□ 0.11
SHROOM3-204ENST00000473602 TFRCP02786 760 aaKnown RBP15.73■□□□□ 0.11
SHROOM3-204ENST00000473602 CYP7A1P22680 504 aa15.73■□□□□ 0.11
SHROOM3-204ENST00000473602 FLT3LGP49771 235 aa15.73■□□□□ 0.11
SHROOM3-204ENST00000473602 ADGRA1Q86SQ6 560 aa15.73■□□□□ 0.11
SHROOM3-204ENST00000473602 SH3RF3Q8TEJ3 882 aaPredicted RBP15.73■□□□□ 0.11
SHROOM3-204ENST00000473602 ANTXR1Q9H6X2 564 aa15.73■□□□□ 0.11
SHROOM3-204ENST00000473602 PCDHB15Q9Y5E8 787 aa15.73■□□□□ 0.11
SHROOM3-204ENST00000473602 NDUFB9Q9Y6M9 179 aa15.73■□□□□ 0.11
SHROOM3-204ENST00000473602 ZHX2Q9Y6X8 837 aa15.73■□□□□ 0.11
SHROOM3-204ENST00000473602 MYH1P12882 1939 aa15.72■□□□□ 0.11
SHROOM3-204ENST00000473602 EVI5O60447 810 aa15.72■□□□□ 0.11
SHROOM3-204ENST00000473602 ELNP15502 786 aa15.72■□□□□ 0.11
SHROOM3-204ENST00000473602 FASTKD5Q7L8L6 764 aaKnown RBP15.72■□□□□ 0.11
SHROOM3-204ENST00000473602 MAGEB6Q8N7X4 407 aa15.72■□□□□ 0.11
SHROOM3-204ENST00000473602 CRBNQ96SW2 442 aa15.72■□□□□ 0.11
SHROOM3-204ENST00000473602 DHX36Q9H2U1 1008 aaKnown RBP15.72■□□□□ 0.11
SHROOM3-204ENST00000473602 ATAD5Q96QE3 1844 aa15.72■□□□□ 0.11
SHROOM3-204ENST00000473602 SIPA1L1O43166 1804 aa15.71■□□□□ 0.11
SHROOM3-204ENST00000473602 A0A0G2JLL6 359 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms