RNA–Protein interactions for RNA: ENST00000473550.1

DUBR-203, DPPA2 upstream binding RNA, humanhuman

TSL 3 BASIC

Gene DUBR, Length 738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-203ENST00000473550 MCM9Q9NXL9 1143 aa11.5□□□□□ -0.57
DUBR-203ENST00000473550 RNF181Q9P0P0 153 aa11.5□□□□□ -0.57
DUBR-203ENST00000473550 ECM29Q5VYK3 1845 aa11.5□□□□□ -0.57
DUBR-203ENST00000473550 NAV1Q8NEY1 1877 aa11.5□□□□□ -0.57
DUBR-203ENST00000473550 USP17L12C9JPN9 530 aa11.49□□□□□ -0.57
DUBR-203ENST00000473550 USP17L21D6R901 530 aa11.49□□□□□ -0.57
DUBR-203ENST00000473550 HAX1O00165 279 aa11.49□□□□□ -0.57
DUBR-203ENST00000473550 POLR3DP05423 398 aaPredicted RBP11.49□□□□□ -0.57
DUBR-203ENST00000473550 HLA-DOAP06340 250 aa11.49□□□□□ -0.57
DUBR-203ENST00000473550 FGRP09769 529 aa11.49□□□□□ -0.57
DUBR-203ENST00000473550 RPS6KB1P23443 525 aa11.49□□□□□ -0.57
DUBR-203ENST00000473550 MCM5P33992 734 aa11.49□□□□□ -0.57
DUBR-203ENST00000473550 TNNI2P48788 182 aa11.49□□□□□ -0.57
DUBR-203ENST00000473550 C12orf60Q5U649 245 aa11.49□□□□□ -0.57
DUBR-203ENST00000473550 CDC42EP5Q6NZY7 148 aa11.49□□□□□ -0.57
DUBR-203ENST00000473550 TGFBRAP1Q8WUH2 860 aa11.49□□□□□ -0.57
DUBR-203ENST00000473550 IPO9Q96P70 1041 aaKnown RBP11.49□□□□□ -0.57
DUBR-203ENST00000473550 MYOZ2Q9NPC6 264 aa11.49□□□□□ -0.57
DUBR-203ENST00000473550 FLT1P17948 1338 aa11.49□□□□□ -0.57
DUBR-203ENST00000473550 ROBO3Q96MS0 1386 aa11.49□□□□□ -0.57
DUBR-203ENST00000473550 MINDY4BA8MYZ0 360 aa11.48□□□□□ -0.57
DUBR-203ENST00000473550 ORC4O43929 436 aa11.48□□□□□ -0.57
DUBR-203ENST00000473550 WDHD1O75717 1129 aaPredicted RBP11.48□□□□□ -0.57
DUBR-203ENST00000473550 GMPSP49915 693 aaPredicted RBP11.48□□□□□ -0.57
DUBR-203ENST00000473550 PRELPP51888 382 aa11.48□□□□□ -0.57
DUBR-203ENST00000473550 TNFAIP1Q13829 316 aa11.48□□□□□ -0.57
DUBR-203ENST00000473550 SART3Q15020 963 aaKnown RBP11.48□□□□□ -0.57
DUBR-203ENST00000473550 CCDC178Q5BJE1 867 aa11.48□□□□□ -0.57
DUBR-203ENST00000473550 C9orf131Q5VYM1 1079 aa11.48□□□□□ -0.57
DUBR-203ENST00000473550 FAM83AQ86UY5 434 aa11.48□□□□□ -0.57
DUBR-203ENST00000473550 ESR2Q92731 530 aa11.48□□□□□ -0.57
DUBR-203ENST00000473550 ZSCAN31Q96LW9 406 aaPredicted RBP11.48□□□□□ -0.57
DUBR-203ENST00000473550 OSBPL5Q9H0X9 879 aaPredicted RBP11.48□□□□□ -0.57
DUBR-203ENST00000473550 PDRG1Q9NUG6 133 aa11.48□□□□□ -0.57
DUBR-203ENST00000473550 CNOT7Q9UIV1 285 aaKnown RBP11.48□□□□□ -0.57
DUBR-203ENST00000473550 GJA3Q9Y6H8 435 aa11.48□□□□□ -0.57
DUBR-203ENST00000473550 DDX60LQ5H9U9 1706 aaKnown RBP11.48□□□□□ -0.57
DUBR-203ENST00000473550 CDK5RAP2Q96SN8 1893 aa11.48□□□□□ -0.57
DUBR-203ENST00000473550 LMOD1P29536 600 aaPredicted RBP11.47□□□□□ -0.57
DUBR-203ENST00000473550 HAND2P61296 217 aa11.47□□□□□ -0.57
DUBR-203ENST00000473550 FGD1P98174 961 aa11.47□□□□□ -0.57
DUBR-203ENST00000473550 ADCK5Q3MIX3 580 aa11.47□□□□□ -0.57
DUBR-203ENST00000473550 PPP4R3BQ5MIZ7 849 aa11.47□□□□□ -0.57
DUBR-203ENST00000473550 MAPKAPK5Q8IW41 473 aa11.47□□□□□ -0.57
DUBR-203ENST00000473550 TMTC2Q8N394 836 aa11.47□□□□□ -0.57
DUBR-203ENST00000473550 ZBED3Q96IU2 234 aaPredicted RBP11.47□□□□□ -0.57
DUBR-203ENST00000473550 TMEM87BQ96K49 555 aa11.47□□□□□ -0.57
DUBR-203ENST00000473550 TTC14Q96N46 770 aa11.47□□□□□ -0.57
DUBR-203ENST00000473550 EHD4Q9H223 541 aa11.47□□□□□ -0.57
DUBR-203ENST00000473550 GPRC5DQ9NZD1 345 aa11.47□□□□□ -0.57
DUBR-203ENST00000473550 SWAP70Q9UH65 585 aa11.47□□□□□ -0.57
DUBR-203ENST00000473550 ATRNL1Q5VV63 1379 aa11.46□□□□□ -0.57
DUBR-203ENST00000473550 ZNF541Q9H0D2 1346 aa11.46□□□□□ -0.57
DUBR-203ENST00000473550 ERICH2A1L162 156 aa11.46□□□□□ -0.57
DUBR-203ENST00000473550 K7ELQ4 463 aaPredicted RBP11.46□□□□□ -0.57
DUBR-203ENST00000473550 EXOSC10Q01780 885 aaKnown RBP11.46□□□□□ -0.57
DUBR-203ENST00000473550 IQCA1Q86XH1 822 aa11.46□□□□□ -0.57
DUBR-203ENST00000473550 FOXP4Q8IVH2 680 aaPredicted RBP11.46□□□□□ -0.57
DUBR-203ENST00000473550 MICALL2Q8IY33 904 aa11.46□□□□□ -0.57
DUBR-203ENST00000473550 FAM151AQ8WW52 585 aa11.46□□□□□ -0.57
DUBR-203ENST00000473550 HOOK2Q96ED9 719 aa11.46□□□□□ -0.57
DUBR-203ENST00000473550 PRMT6Q96LA8 375 aaPredicted RBP11.46□□□□□ -0.57
DUBR-203ENST00000473550 UPF3BQ9BZI7 483 aaKnown RBP11.46□□□□□ -0.57
DUBR-203ENST00000473550 TDRD3Q9H7E2 651 aaKnown RBP11.46□□□□□ -0.57
DUBR-203ENST00000473550 SH2B1Q9NRF2 756 aaPredicted RBP11.46□□□□□ -0.57
DUBR-203ENST00000473550 PI4KBQ9UBF8 816 aa11.46□□□□□ -0.57
DUBR-203ENST00000473550 LIMCH1Q9UPQ0 1083 aa11.46□□□□□ -0.57
DUBR-203ENST00000473550 MYH1P12882 1939 aa11.45□□□□□ -0.58
DUBR-203ENST00000473550 WNT10BO00744 389 aa11.45□□□□□ -0.58
DUBR-203ENST00000473550 PICALMQ13492 652 aa11.45□□□□□ -0.58
DUBR-203ENST00000473550 STOX1Q6ZVD7 989 aa11.45□□□□□ -0.58
DUBR-203ENST00000473550 C16orf86Q6ZW13 317 aa11.45□□□□□ -0.58
DUBR-203ENST00000473550 TBC1D10CQ8IV04 446 aa11.45□□□□□ -0.58
DUBR-203ENST00000473550 MB21D2Q8IYB1 491 aaPredicted RBP11.45□□□□□ -0.58
DUBR-203ENST00000473550 L3MBTL3Q96JM7 780 aaPredicted RBP11.45□□□□□ -0.58
DUBR-203ENST00000473550 AGXT2Q9BYV1 514 aa11.45□□□□□ -0.58
DUBR-203ENST00000473550 MKNK2Q9HBH9 465 aa11.45□□□□□ -0.58
DUBR-203ENST00000473550 ADARB2Q9NS39 739 aaKnown RBP11.45□□□□□ -0.58
DUBR-203ENST00000473550 ZNF70Q9UC06 446 aaPredicted RBP11.45□□□□□ -0.58
DUBR-203ENST00000473550 SERPINB13Q9UIV8 391 aa11.45□□□□□ -0.58
DUBR-203ENST00000473550 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.45□□□□□ -0.58
DUBR-203ENST00000473550 BAZ2AQ9UIF9 1905 aaKnown RBP11.45□□□□□ -0.58
DUBR-203ENST00000473550 IQCA1LA6NCM1 817 aa11.44□□□□□ -0.58
DUBR-203ENST00000473550 GLTPD2A6NH11 291 aa11.44□□□□□ -0.58
DUBR-203ENST00000473550 PRC1O43663 620 aa11.44□□□□□ -0.58
DUBR-203ENST00000473550 LIFRP42702 1097 aa11.44□□□□□ -0.58
DUBR-203ENST00000473550 CTDSPL2Q05D32 466 aa11.44□□□□□ -0.58
DUBR-203ENST00000473550 KIF4BQ2VIQ3 1234 aa11.44□□□□□ -0.58
DUBR-203ENST00000473550 APOBEC3FQ8IUX4 373 aaKnown RBP11.44□□□□□ -0.58
DUBR-203ENST00000473550 ZNF444Q8N0Y2 327 aaPredicted RBP11.44□□□□□ -0.58
DUBR-203ENST00000473550 CCDC17Q96LX7 622 aa11.44□□□□□ -0.58
DUBR-203ENST00000473550 TRIM34Q9BYJ4 488 aa11.44□□□□□ -0.58
DUBR-203ENST00000473550 TBC1D2Q9BYX2 928 aa11.44□□□□□ -0.58
DUBR-203ENST00000473550 NBPF3Q9H094 633 aa11.44□□□□□ -0.58
DUBR-203ENST00000473550 TOMM22Q9NS69 142 aa11.44□□□□□ -0.58
DUBR-203ENST00000473550 HERC5Q9UII4 1024 aaKnown RBP11.44□□□□□ -0.58
DUBR-203ENST00000473550 PPP2R3BQ9Y5P8 575 aa11.44□□□□□ -0.58
DUBR-203ENST00000473550 ADAMTSL1Q8N6G6 1762 aa11.44□□□□□ -0.58
DUBR-203ENST00000473550 PITPNM2Q9BZ72 1349 aa11.43□□□□□ -0.58
DUBR-203ENST00000473550 B4E1Z4 1266 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms