RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 ZHX2Q9Y6X8 837 aa27.39■■□□□ 1.98
PTP4A1-203ENST00000473334 SMARCA5O60264 1052 aaPredicted RBP27.38■■□□□ 1.97
PTP4A1-203ENST00000473334 ANKRD23Q86SG2 305 aa27.38■■□□□ 1.97
PTP4A1-203ENST00000473334 PTPRFP10586 1907 aa27.37■■□□□ 1.97
PTP4A1-203ENST00000473334 MYH1P12882 1939 aa27.37■■□□□ 1.97
PTP4A1-203ENST00000473334 SP3Q02447 781 aa27.37■■□□□ 1.97
PTP4A1-203ENST00000473334 BOLA2Q9H3K6 86 aa27.37■■□□□ 1.97
PTP4A1-203ENST00000473334 PDE6AP16499 860 aa27.36■■□□□ 1.97
PTP4A1-203ENST00000473334 MOGSQ13724 837 aa27.36■■□□□ 1.97
PTP4A1-203ENST00000473334 SLC9C2Q5TAH2 1124 aa27.36■■□□□ 1.97
PTP4A1-203ENST00000473334 CD99L2Q8TCZ2 262 aa27.36■■□□□ 1.97
PTP4A1-203ENST00000473334 PAG1Q9NWQ8 432 aa27.36■■□□□ 1.97
PTP4A1-203ENST00000473334 AFG3L2Q9Y4W6 797 aa27.36■■□□□ 1.97
PTP4A1-203ENST00000473334 PCDHB15Q9Y5E8 787 aa27.36■■□□□ 1.97
PTP4A1-203ENST00000473334 USP5P45974 858 aa27.35■■□□□ 1.97
PTP4A1-203ENST00000473334 FBXO46Q6PJ61 603 aaPredicted RBP27.35■■□□□ 1.97
PTP4A1-203ENST00000473334 EDC3Q96F86 508 aaKnown RBP27.35■■□□□ 1.97
PTP4A1-203ENST00000473334 HAUS7Q99871 368 aa27.35■■□□□ 1.97
PTP4A1-203ENST00000473334 PALD1Q9ULE6 856 aa27.35■■□□□ 1.97
PTP4A1-203ENST00000473334 A0A0G2JLL6 359 aaPredicted RBP27.34■■□□□ 1.97
PTP4A1-203ENST00000473334 TLR2O60603 784 aa27.34■■□□□ 1.97
PTP4A1-203ENST00000473334 HLA-DOAP06340 250 aa27.34■■□□□ 1.97
PTP4A1-203ENST00000473334 PRRT2Q7Z6L0 340 aaPredicted RBP27.34■■□□□ 1.97
PTP4A1-203ENST00000473334 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.34■■□□□ 1.97
PTP4A1-203ENST00000473334 SAP30BPQ9UHR5 308 aaKnown RBP27.34■■□□□ 1.97
PTP4A1-203ENST00000473334 HPS5Q9UPZ3 1129 aa27.34■■□□□ 1.97
PTP4A1-203ENST00000473334 TRIM17Q9Y577 477 aa27.34■■□□□ 1.97
PTP4A1-203ENST00000473334 MAGEB6P1A0A0J9YX57 407 aa27.33■■□□□ 1.97
PTP4A1-203ENST00000473334 PDHXO00330 501 aa27.33■■□□□ 1.97
PTP4A1-203ENST00000473334 CAP2P40123 477 aa27.33■■□□□ 1.97
PTP4A1-203ENST00000473334 OTOP1Q7RTM1 612 aa27.33■■□□□ 1.97
PTP4A1-203ENST00000473334 METTL16Q86W50 562 aaKnown RBP27.33■■□□□ 1.97
PTP4A1-203ENST00000473334 FOXP4Q8IVH2 680 aaPredicted RBP27.33■■□□□ 1.97
PTP4A1-203ENST00000473334 CRACR2BQ8N4Y2 399 aaPredicted RBP27.33■■□□□ 1.97
PTP4A1-203ENST00000473334 CRBNQ96SW2 442 aa27.33■■□□□ 1.97
PTP4A1-203ENST00000473334 RIOK1Q9BRS2 568 aaKnown RBP27.33■■□□□ 1.97
PTP4A1-203ENST00000473334 TRIM34Q9BYJ4 488 aa27.33■■□□□ 1.97
PTP4A1-203ENST00000473334 ZNF532Q9HCE3 1301 aa27.33■■□□□ 1.97
PTP4A1-203ENST00000473334 MYH7P12883 1935 aa27.33■■□□□ 1.97
PTP4A1-203ENST00000473334 RRP1BQ14684 758 aaKnown RBP27.32■■□□□ 1.96
PTP4A1-203ENST00000473334 FASTKD5Q7L8L6 764 aaKnown RBP27.32■■□□□ 1.96
PTP4A1-203ENST00000473334 CCDC84Q86UT8 332 aaPredicted RBP27.32■■□□□ 1.96
PTP4A1-203ENST00000473334 DDX60LQ5H9U9 1706 aaKnown RBP27.32■■□□□ 1.96
PTP4A1-203ENST00000473334 NAV1Q8NEY1 1877 aa27.32■■□□□ 1.96
PTP4A1-203ENST00000473334 TCRBV5S4A2TA0A5A2 114 aa27.31■■□□□ 1.96
PTP4A1-203ENST00000473334 GPAT2Q6NUI2 795 aa27.31■■□□□ 1.96
PTP4A1-203ENST00000473334 TBC1D2Q9BYX2 928 aa27.31■■□□□ 1.96
PTP4A1-203ENST00000473334 DNAJC18Q9H819 358 aa27.31■■□□□ 1.96
PTP4A1-203ENST00000473334 TRIM75PA6NK02 468 aa27.3■■□□□ 1.96
PTP4A1-203ENST00000473334 GADL1Q6ZQY3 521 aa27.3■■□□□ 1.96
PTP4A1-203ENST00000473334 GPATCH3Q96I76 525 aa27.3■■□□□ 1.96
PTP4A1-203ENST00000473334 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.3■■□□□ 1.96
PTP4A1-203ENST00000473334 EFCC1Q9HA90 598 aa27.3■■□□□ 1.96
PTP4A1-203ENST00000473334 ECHDC1Q9NTX5 307 aa27.3■■□□□ 1.96
PTP4A1-203ENST00000473334 ADD2P35612 726 aa27.29■■□□□ 1.96
PTP4A1-203ENST00000473334 SLC4A8Q2Y0W8 1093 aa27.29■■□□□ 1.96
PTP4A1-203ENST00000473334 PARK7Q99497 189 aaKnown RBP27.29■■□□□ 1.96
PTP4A1-203ENST00000473334 CRNKL1Q9BZJ0 848 aaKnown RBP27.29■■□□□ 1.96
PTP4A1-203ENST00000473334 ADGRA2Q96PE1 1338 aa27.28■■□□□ 1.96
PTP4A1-203ENST00000473334 USP17L5A8MUK1 530 aa27.28■■□□□ 1.96
PTP4A1-203ENST00000473334 ARHGEF6Q15052 776 aa27.28■■□□□ 1.96
PTP4A1-203ENST00000473334 LOC285556D6RIA3 1793 aa27.27■■□□□ 1.96
PTP4A1-203ENST00000473334 CAP1Q01518 475 aa27.27■■□□□ 1.96
PTP4A1-203ENST00000473334 C17orf99Q6UX52 265 aa27.27■■□□□ 1.96
PTP4A1-203ENST00000473334 TTC6Q86TZ1 520 aa27.27■■□□□ 1.96
PTP4A1-203ENST00000473334 ZNF280CQ8ND82 737 aa27.27■■□□□ 1.96
PTP4A1-203ENST00000473334 ASNSP08243 561 aa27.26■■□□□ 1.95
PTP4A1-203ENST00000473334 SPP2Q13103 211 aa27.26■■□□□ 1.95
PTP4A1-203ENST00000473334 EHD4Q9H223 541 aa27.26■■□□□ 1.95
PTP4A1-203ENST00000473334 AS3MTQ9HBK9 375 aa27.26■■□□□ 1.95
PTP4A1-203ENST00000473334 GINM1Q9NU53 330 aa27.26■■□□□ 1.95
PTP4A1-203ENST00000473334 SLC45A1Q9Y2W3 748 aa27.26■■□□□ 1.95
PTP4A1-203ENST00000473334 ZSWIM8A7E2V4 1837 aa27.25■■□□□ 1.95
PTP4A1-203ENST00000473334 KIF22Q14807 665 aa27.25■■□□□ 1.95
PTP4A1-203ENST00000473334 LCORLQ8N3X6 602 aa27.25■■□□□ 1.95
PTP4A1-203ENST00000473334 CPA4Q9UI42 421 aa27.25■■□□□ 1.95
PTP4A1-203ENST00000473334 SERPINB13Q9UIV8 391 aa27.25■■□□□ 1.95
PTP4A1-203ENST00000473334 PTPN22Q9Y2R2 807 aa27.25■■□□□ 1.95
PTP4A1-203ENST00000473334 HTTP42858 3142 aa27.25■■□□□ 1.95
PTP4A1-203ENST00000473334 GDF11O95390 407 aa27.24■■□□□ 1.95
PTP4A1-203ENST00000473334 LACTBP83111 547 aaPredicted RBP27.24■■□□□ 1.95
PTP4A1-203ENST00000473334 ZSCAN25Q6NSZ9 544 aa27.24■■□□□ 1.95
PTP4A1-203ENST00000473334 PROCA1Q8NCQ7 364 aaPredicted RBP27.24■■□□□ 1.95
PTP4A1-203ENST00000473334 AGTPBP1Q9UPW5 1226 aa27.24■■□□□ 1.95
PTP4A1-203ENST00000473334 CYP2C8P10632 490 aa27.23■■□□□ 1.95
PTP4A1-203ENST00000473334 RGS19P49795 217 aa27.23■■□□□ 1.95
PTP4A1-203ENST00000473334 JAG1P78504 1218 aa27.23■■□□□ 1.95
PTP4A1-203ENST00000473334 UBE3CQ15386 1083 aa27.23■■□□□ 1.95
PTP4A1-203ENST00000473334 SLFNL1Q499Z3 407 aa27.23■■□□□ 1.95
PTP4A1-203ENST00000473334 WDR18Q9BV38 432 aa27.23■■□□□ 1.95
PTP4A1-203ENST00000473334 ARMT1Q9H993 441 aa27.23■■□□□ 1.95
PTP4A1-203ENST00000473334 ZBTB21Q9ULJ3 1066 aa27.23■■□□□ 1.95
PTP4A1-203ENST00000473334 MBD4O95243 580 aa27.22■■□□□ 1.95
PTP4A1-203ENST00000473334 POLR3DP05423 398 aaPredicted RBP27.22■■□□□ 1.95
PTP4A1-203ENST00000473334 TSHZ3Q63HK5 1081 aa27.22■■□□□ 1.95
PTP4A1-203ENST00000473334 TATDN1Q6P1N9 297 aa27.22■■□□□ 1.95
PTP4A1-203ENST00000473334 SDR42E1Q8WUS8 393 aa27.22■■□□□ 1.95
PTP4A1-203ENST00000473334 PLCD1P51178 756 aa27.21■■□□□ 1.95
PTP4A1-203ENST00000473334 HMGCS2P54868 508 aa27.21■■□□□ 1.95
PTP4A1-203ENST00000473334 SOX10P56693 466 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms