RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 CCDC136Q96JN2 1154 aa11.06□□□□□ -0.64
SMC4-214ENST00000472991 ANTXR1Q9H6X2 564 aa11.06□□□□□ -0.64
SMC4-214ENST00000472991 PIH1D3Q9NQM4 214 aaKnown RBP11.06□□□□□ -0.64
SMC4-214ENST00000472991 ASTN2O75129 1339 aaPredicted RBP11.06□□□□□ -0.64
SMC4-214ENST00000472991 TTC41PQ6P2S7 1318 aa11.06□□□□□ -0.64
SMC4-214ENST00000472991 BAZ2AQ9UIF9 1905 aaKnown RBP11.05□□□□□ -0.64
SMC4-214ENST00000472991 GOLIM4O00461 696 aa11.05□□□□□ -0.64
SMC4-214ENST00000472991 WNT10BO00744 389 aa11.05□□□□□ -0.64
SMC4-214ENST00000472991 TOMM70O94826 608 aa11.05□□□□□ -0.64
SMC4-214ENST00000472991 HIC1Q14526 733 aa11.05□□□□□ -0.64
SMC4-214ENST00000472991 DLGAP5Q15398 846 aa11.05□□□□□ -0.64
SMC4-214ENST00000472991 NBPF9Q3BBW0 867 aa11.05□□□□□ -0.64
SMC4-214ENST00000472991 SMYD5Q6GMV2 418 aa11.05□□□□□ -0.64
SMC4-214ENST00000472991 TEKT1Q969V4 418 aa11.05□□□□□ -0.64
SMC4-214ENST00000472991 EDC3Q96F86 508 aaKnown RBP11.05□□□□□ -0.64
SMC4-214ENST00000472991 ZBED3Q96IU2 234 aaPredicted RBP11.05□□□□□ -0.64
SMC4-214ENST00000472991 HAUS7Q99871 368 aa11.05□□□□□ -0.64
SMC4-214ENST00000472991 GGA3Q9NZ52 723 aa11.05□□□□□ -0.64
SMC4-214ENST00000472991 RAI14Q9P0K7 980 aa11.05□□□□□ -0.64
SMC4-214ENST00000472991 LRP2BPQ9P2M1 347 aa11.05□□□□□ -0.64
SMC4-214ENST00000472991 SERPINA10Q9UK55 444 aa11.05□□□□□ -0.64
SMC4-214ENST00000472991 AOX1Q06278 1338 aa11.05□□□□□ -0.64
SMC4-214ENST00000472991 ERC2O15083 957 aa11.04□□□□□ -0.64
SMC4-214ENST00000472991 IDH1O75874 414 aaKnown RBP11.04□□□□□ -0.64
SMC4-214ENST00000472991 PDE1AP54750 535 aa11.04□□□□□ -0.64
SMC4-214ENST00000472991 COPS2P61201 443 aa11.04□□□□□ -0.64
SMC4-214ENST00000472991 HDLBPQ00341 1268 aaKnown RBP11.04□□□□□ -0.64
SMC4-214ENST00000472991 MECOMQ03112 1051 aa11.04□□□□□ -0.64
SMC4-214ENST00000472991 ANGEL2Q5VTE6 544 aaKnown RBP11.04□□□□□ -0.64
SMC4-214ENST00000472991 ERICH6BQ5W0A0 696 aa11.04□□□□□ -0.64
SMC4-214ENST00000472991 MAP1SQ66K74 1059 aaPredicted RBP11.04□□□□□ -0.64
SMC4-214ENST00000472991 PPP1R18Q6NYC8 613 aa11.04□□□□□ -0.64
SMC4-214ENST00000472991 CENPQQ7L2Z9 268 aaPredicted RBP11.04□□□□□ -0.64
SMC4-214ENST00000472991 MTMR14Q8NCE2 650 aa11.04□□□□□ -0.64
SMC4-214ENST00000472991 PI4K2BQ8TCG2 481 aa11.04□□□□□ -0.64
SMC4-214ENST00000472991 ZNF384Q8TF68 577 aa11.04□□□□□ -0.64
SMC4-214ENST00000472991 NSUN4Q96CB9 384 aaKnown RBP11.04□□□□□ -0.64
SMC4-214ENST00000472991 PRMT6Q96LA8 375 aaPredicted RBP11.04□□□□□ -0.64
SMC4-214ENST00000472991 PRR14Q9BWN1 585 aa11.04□□□□□ -0.64
SMC4-214ENST00000472991 PAG1Q9NWQ8 432 aa11.04□□□□□ -0.64
SMC4-214ENST00000472991 DAGLAQ9Y4D2 1042 aa11.04□□□□□ -0.64
SMC4-214ENST00000472991 MYH8P13535 1937 aa11.03□□□□□ -0.64
SMC4-214ENST00000472991 OTOFQ9HC10 1997 aa11.03□□□□□ -0.64
SMC4-214ENST00000472991 CLRN2A0PK11 232 aa11.03□□□□□ -0.64
SMC4-214ENST00000472991 GPR37O15354 613 aa11.03□□□□□ -0.64
SMC4-214ENST00000472991 GLRX3O76003 335 aaKnown RBP11.03□□□□□ -0.64
SMC4-214ENST00000472991 MAP4K4O95819 1239 aaPredicted RBP11.03□□□□□ -0.64
SMC4-214ENST00000472991 TTF1Q15361 905 aaPredicted RBP11.03□□□□□ -0.64
SMC4-214ENST00000472991 HHIPL2Q6UWX4 724 aa11.03□□□□□ -0.64
SMC4-214ENST00000472991 PLEKHM2Q8IWE5 1019 aa11.03□□□□□ -0.64
SMC4-214ENST00000472991 SMC1BQ8NDV3 1235 aa11.03□□□□□ -0.64
SMC4-214ENST00000472991 NKX2-3Q8TAU0 364 aa11.03□□□□□ -0.64
SMC4-214ENST00000472991 PXYLP1Q8TE99 480 aa11.03□□□□□ -0.64
SMC4-214ENST00000472991 ZC3H15Q8WU90 426 aaKnown RBP11.03□□□□□ -0.64
SMC4-214ENST00000472991 ZDHHC15Q96MV8 337 aa11.03□□□□□ -0.64
SMC4-214ENST00000472991 PPP4R2Q9NY27 417 aa11.03□□□□□ -0.64
SMC4-214ENST00000472991 STAP2Q9UGK3 403 aa11.03□□□□□ -0.64
SMC4-214ENST00000472991 MROH7-TTC4A0A0A0MT08 1334 aa11.03□□□□□ -0.64
SMC4-214ENST00000472991 GAKO14976 1311 aa11.03□□□□□ -0.64
SMC4-214ENST00000472991 DDX60LQ5H9U9 1706 aaKnown RBP11.02□□□□□ -0.65
SMC4-214ENST00000472991 MYO1BO43795 1136 aa11.02□□□□□ -0.65
SMC4-214ENST00000472991 GSTO1P78417 241 aa11.02□□□□□ -0.65
SMC4-214ENST00000472991 MAP3K12Q12852 859 aa11.02□□□□□ -0.65
SMC4-214ENST00000472991 NAA16Q6N069 864 aaPredicted RBP11.02□□□□□ -0.65
SMC4-214ENST00000472991 MAGEB6Q8N7X4 407 aa11.02□□□□□ -0.65
SMC4-214ENST00000472991 DCPSQ96C86 337 aaKnown RBP11.02□□□□□ -0.65
SMC4-214ENST00000472991 MRIQ9BWK5 157 aa11.02□□□□□ -0.65
SMC4-214ENST00000472991 GLIS2Q9BZE0 524 aaPredicted RBP11.02□□□□□ -0.65
SMC4-214ENST00000472991 TDRD3Q9H7E2 651 aaKnown RBP11.02□□□□□ -0.65
SMC4-214ENST00000472991 VEZTQ9HBM0 779 aa11.02□□□□□ -0.65
SMC4-214ENST00000472991 PGAP2Q9UHJ9 254 aa11.02□□□□□ -0.65
SMC4-214ENST00000472991 SCAF8Q9UPN6 1271 aaKnown RBP11.02□□□□□ -0.65
SMC4-214ENST00000472991 PITPNM2Q9BZ72 1349 aa11.02□□□□□ -0.65
SMC4-214ENST00000472991 SIPA1L1O43166 1804 aa11.02□□□□□ -0.65
SMC4-214ENST00000472991 LAMB1P07942 1786 aa11.01□□□□□ -0.65
SMC4-214ENST00000472991 ADM5C9JUS6 153 aa11.01□□□□□ -0.65
SMC4-214ENST00000472991 OATP04181 439 aa11.01□□□□□ -0.65
SMC4-214ENST00000472991 LDHCP07864 332 aa11.01□□□□□ -0.65
SMC4-214ENST00000472991 BTDP43251 543 aa11.01□□□□□ -0.65
SMC4-214ENST00000472991 APOBEC3HQ6NTF7 200 aaKnown RBP11.01□□□□□ -0.65
SMC4-214ENST00000472991 ADGRA1Q86SQ6 560 aa11.01□□□□□ -0.65
SMC4-214ENST00000472991 CNTROBQ8N137 903 aa11.01□□□□□ -0.65
SMC4-214ENST00000472991 ZNF70Q9UC06 446 aaPredicted RBP11.01□□□□□ -0.65
SMC4-214ENST00000472991 PCDHB3Q9Y5E6 796 aa11.01□□□□□ -0.65
SMC4-214ENST00000472991 ATAD5Q96QE3 1844 aa11□□□□□ -0.65
SMC4-214ENST00000472991 PDE6AP16499 860 aa11□□□□□ -0.65
SMC4-214ENST00000472991 CYP7A1P22680 504 aa11□□□□□ -0.65
SMC4-214ENST00000472991 FECHP22830 423 aa11□□□□□ -0.65
SMC4-214ENST00000472991 CACNB3P54284 484 aa11□□□□□ -0.65
SMC4-214ENST00000472991 FSTL1Q12841 308 aa11□□□□□ -0.65
SMC4-214ENST00000472991 DLK2Q6UY11 383 aa11□□□□□ -0.65
SMC4-214ENST00000472991 KRT26Q7Z3Y9 468 aa11□□□□□ -0.65
SMC4-214ENST00000472991 METTL3Q86U44 580 aaKnown RBP11□□□□□ -0.65
SMC4-214ENST00000472991 SKAP1Q86WV1 359 aa11□□□□□ -0.65
SMC4-214ENST00000472991 APOBEC3FQ8IUX4 373 aaKnown RBP11□□□□□ -0.65
SMC4-214ENST00000472991 SULF1Q8IWU6 871 aa11□□□□□ -0.65
SMC4-214ENST00000472991 KBTBD3Q8NAB2 608 aa11□□□□□ -0.65
SMC4-214ENST00000472991 OSBPL3Q9H4L5 887 aa11□□□□□ -0.65
SMC4-214ENST00000472991 PAPPA2Q9BXP8 1791 aa11□□□□□ -0.65
SMC4-214ENST00000472991 GPR75-ASB3A0A0A6YYF3 556 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms