RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 MTFR1Q15390 333 aa7.89□□□□□ -1.15
HDAC1-205ENST00000472928 CCL15Q16663 113 aa7.89□□□□□ -1.15
HDAC1-205ENST00000472928 TUSC1Q2TAM9 212 aa7.89□□□□□ -1.15
HDAC1-205ENST00000472928 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.89□□□□□ -1.15
HDAC1-205ENST00000472928 PRMT6Q96LA8 375 aaPredicted RBP7.89□□□□□ -1.15
HDAC1-205ENST00000472928 ZFYVE28Q9HCC9 887 aa7.89□□□□□ -1.15
HDAC1-205ENST00000472928 CD209Q9NNX6 404 aa7.89□□□□□ -1.15
HDAC1-205ENST00000472928 KIAA1468Q9P260 1216 aa7.89□□□□□ -1.15
HDAC1-205ENST00000472928 VCANP13611 3396 aa7.89□□□□□ -1.15
HDAC1-205ENST00000472928 ECM29Q5VYK3 1845 aa7.89□□□□□ -1.15
HDAC1-205ENST00000472928 SNAP23O00161 211 aa7.88□□□□□ -1.15
HDAC1-205ENST00000472928 IGHDP01880 384 aa7.88□□□□□ -1.15
HDAC1-205ENST00000472928 GNAI3P08754 354 aa7.88□□□□□ -1.15
HDAC1-205ENST00000472928 UBTFL1P0CB47 393 aaPredicted RBP7.88□□□□□ -1.15
HDAC1-205ENST00000472928 CTGFP29279 349 aa7.88□□□□□ -1.15
HDAC1-205ENST00000472928 PSEN2P49810 448 aa7.88□□□□□ -1.15
HDAC1-205ENST00000472928 LACTBP83111 547 aaPredicted RBP7.88□□□□□ -1.15
HDAC1-205ENST00000472928 NEXNQ0ZGT2 675 aa7.88□□□□□ -1.15
HDAC1-205ENST00000472928 ARHGEF6Q15052 776 aa7.88□□□□□ -1.15
HDAC1-205ENST00000472928 BEND3Q5T5X7 828 aa7.88□□□□□ -1.15
HDAC1-205ENST00000472928 PPP2R2DQ66LE6 453 aa7.88□□□□□ -1.15
HDAC1-205ENST00000472928 DPF3Q92784 378 aa7.88□□□□□ -1.15
HDAC1-205ENST00000472928 LRCH3Q96II8 777 aa7.88□□□□□ -1.15
HDAC1-205ENST00000472928 TEPSINQ96N21 525 aa7.88□□□□□ -1.15
HDAC1-205ENST00000472928 RWDD1Q9H446 243 aaPredicted RBP7.88□□□□□ -1.15
HDAC1-205ENST00000472928 VEZTQ9HBM0 779 aa7.88□□□□□ -1.15
HDAC1-205ENST00000472928 MOXD2PA6NHM9 499 aa7.87□□□□□ -1.15
HDAC1-205ENST00000472928 SPDYE5A6NIY4 337 aa7.87□□□□□ -1.15
HDAC1-205ENST00000472928 F8W031 263 aaPredicted RBP7.87□□□□□ -1.15
HDAC1-205ENST00000472928 TLR2O60603 784 aa7.87□□□□□ -1.15
HDAC1-205ENST00000472928 ALDH1L1O75891 902 aa7.87□□□□□ -1.15
HDAC1-205ENST00000472928 GNAI2P04899 355 aa7.87□□□□□ -1.15
HDAC1-205ENST00000472928 GTF2A2P52657 109 aa7.87□□□□□ -1.15
HDAC1-205ENST00000472928 HDAC1Q13547 482 aaPredicted RBP7.87□□□□□ -1.15
HDAC1-205ENST00000472928 VGLL4Q14135 290 aa7.87□□□□□ -1.15
HDAC1-205ENST00000472928 CWF19L2Q2TBE0 894 aaKnown RBP7.87□□□□□ -1.15
HDAC1-205ENST00000472928 POTEEQ6S8J3 1075 aa7.87□□□□□ -1.15
HDAC1-205ENST00000472928 C15orf52Q6ZUT6 534 aaKnown RBP7.87□□□□□ -1.15
HDAC1-205ENST00000472928 BANK1Q8NDB2 785 aa7.87□□□□□ -1.15
HDAC1-205ENST00000472928 LINS1Q8NG48 757 aa7.87□□□□□ -1.15
HDAC1-205ENST00000472928 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.87□□□□□ -1.15
HDAC1-205ENST00000472928 ANKRD2Q9GZV1 360 aa7.87□□□□□ -1.15
HDAC1-205ENST00000472928 JAG2Q9Y219 1238 aa7.87□□□□□ -1.15
HDAC1-205ENST00000472928 A0A1W2PPC1 479 aa7.86□□□□□ -1.15
HDAC1-205ENST00000472928 BTBD19C9JJ37 291 aa7.86□□□□□ -1.15
HDAC1-205ENST00000472928 H7C1W4 665 aa7.86□□□□□ -1.15
HDAC1-205ENST00000472928 MYO1BO43795 1136 aa7.86□□□□□ -1.15
HDAC1-205ENST00000472928 GJB1P08034 283 aa7.86□□□□□ -1.15
HDAC1-205ENST00000472928 IL1R1P14778 569 aa7.86□□□□□ -1.15
HDAC1-205ENST00000472928 IGHMBP2P38935 993 aaKnown RBP7.86□□□□□ -1.15
HDAC1-205ENST00000472928 GJA8P48165 433 aa7.86□□□□□ -1.15
HDAC1-205ENST00000472928 PRMT2P55345 433 aa7.86□□□□□ -1.15
HDAC1-205ENST00000472928 FKBP1AP62942 108 aaKnown RBP7.86□□□□□ -1.15
HDAC1-205ENST00000472928 CHRNDQ07001 517 aa7.86□□□□□ -1.15
HDAC1-205ENST00000472928 VARS2Q5ST30 1063 aaKnown RBP7.86□□□□□ -1.15
HDAC1-205ENST00000472928 CEP85Q6P2H3 762 aa7.86□□□□□ -1.15
HDAC1-205ENST00000472928 C17orf99Q6UX52 265 aa7.86□□□□□ -1.15
HDAC1-205ENST00000472928 ANKRD44Q8N8A2 993 aa7.86□□□□□ -1.15
HDAC1-205ENST00000472928 RDH13Q8NBN7 331 aa7.86□□□□□ -1.15
HDAC1-205ENST00000472928 SLC4A5Q9BY07 1137 aa7.86□□□□□ -1.15
HDAC1-205ENST00000472928 ZNF70Q9UC06 446 aaPredicted RBP7.86□□□□□ -1.15
HDAC1-205ENST00000472928 RABGEF1Q9UJ41 708 aa7.86□□□□□ -1.15
HDAC1-205ENST00000472928 LRRFIP2Q9Y608 721 aaKnown RBP7.86□□□□□ -1.15
HDAC1-205ENST00000472928 A0A1B0GUL6 1792 aa7.86□□□□□ -1.15
HDAC1-205ENST00000472928 ADGRA2Q96PE1 1338 aa7.85□□□□□ -1.15
HDAC1-205ENST00000472928 NEURL1BA8MQ27 555 aa7.85□□□□□ -1.15
HDAC1-205ENST00000472928 GRM8O00222 908 aa7.85□□□□□ -1.15
HDAC1-205ENST00000472928 ARHGAP33O14559 1287 aa7.85□□□□□ -1.15
HDAC1-205ENST00000472928 TRAK2O60296 914 aa7.85□□□□□ -1.15
HDAC1-205ENST00000472928 GNRH1P01148 92 aa7.85□□□□□ -1.15
HDAC1-205ENST00000472928 CCL5P13501 91 aa7.85□□□□□ -1.15
HDAC1-205ENST00000472928 ITGA6P23229 1130 aa7.85□□□□□ -1.15
HDAC1-205ENST00000472928 KCNJ4P48050 445 aa7.85□□□□□ -1.15
HDAC1-205ENST00000472928 CASP7P55210 303 aa7.85□□□□□ -1.15
HDAC1-205ENST00000472928 TMEM259Q4ZIN3 620 aa7.85□□□□□ -1.15
HDAC1-205ENST00000472928 UBE3BQ7Z3V4 1068 aa7.85□□□□□ -1.15
HDAC1-205ENST00000472928 SKAP1Q86WV1 359 aa7.85□□□□□ -1.15
HDAC1-205ENST00000472928 SIRT2Q8IXJ6 389 aa7.85□□□□□ -1.15
HDAC1-205ENST00000472928 NKX2-3Q8TAU0 364 aa7.85□□□□□ -1.15
HDAC1-205ENST00000472928 TRIM47Q96LD4 638 aa7.85□□□□□ -1.15
HDAC1-205ENST00000472928 HTATIP2Q9BUP3 242 aa7.85□□□□□ -1.15
HDAC1-205ENST00000472928 PLA2G12BQ9BX93 195 aa7.85□□□□□ -1.15
HDAC1-205ENST00000472928 TMEM39BQ9GZU3 492 aa7.85□□□□□ -1.15
HDAC1-205ENST00000472928 USP44Q9H0E7 712 aa7.85□□□□□ -1.15
HDAC1-205ENST00000472928 ZCCHC17Q9NP64 241 aaKnown RBP7.85□□□□□ -1.15
HDAC1-205ENST00000472928 C9orf78Q9NZ63 289 aaPredicted RBP7.85□□□□□ -1.15
HDAC1-205ENST00000472928 SRRDQ9UH36 339 aa7.85□□□□□ -1.15
HDAC1-205ENST00000472928 NR2E3Q9Y5X4 410 aa7.85□□□□□ -1.15
HDAC1-205ENST00000472928 SNCAIPQ9Y6H5 919 aa7.85□□□□□ -1.15
HDAC1-205ENST00000472928 LAMA2P24043 3122 aaKnown RBP7.85□□□□□ -1.15
HDAC1-205ENST00000472928 APBB1O00213 710 aa7.84□□□□□ -1.15
HDAC1-205ENST00000472928 KDM4AO75164 1064 aa7.84□□□□□ -1.15
HDAC1-205ENST00000472928 HMMRO75330 724 aa7.84□□□□□ -1.15
HDAC1-205ENST00000472928 TAF5LO75529 589 aa7.84□□□□□ -1.15
HDAC1-205ENST00000472928 FARP2O94887 1054 aaPredicted RBP7.84□□□□□ -1.15
HDAC1-205ENST00000472928 CSF1RP07333 972 aa7.84□□□□□ -1.15
HDAC1-205ENST00000472928 NBPF7P0C2Y1 421 aaPredicted RBP7.84□□□□□ -1.15
HDAC1-205ENST00000472928 CETPP11597 493 aa7.84□□□□□ -1.15
HDAC1-205ENST00000472928 NDUFV2P19404 249 aa7.84□□□□□ -1.15
HDAC1-205ENST00000472928 GCGRP47871 477 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms