RNA–Protein interactions for RNA: ENST00000472921.1

CCDC13-204, Transcript of coiled-coil domain containing 13, humanhuman

TSL 5

Gene CCDC13, Length 314 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-204ENST00000472921 ANKRD1Q15327 319 aa14.24□□□□□ -0.13
CCDC13-204ENST00000472921 TBC1D10BQ4KMP7 808 aaPredicted RBP14.24□□□□□ -0.13
CCDC13-204ENST00000472921 USP50Q70EL3 339 aaPredicted RBP14.24□□□□□ -0.13
CCDC13-204ENST00000472921 SH3BP5LQ7L8J4 393 aa14.24□□□□□ -0.13
CCDC13-204ENST00000472921 RALYLQ86SE5 291 aaKnown RBP14.24□□□□□ -0.13
CCDC13-204ENST00000472921 PDRG1Q9NUG6 133 aa14.24□□□□□ -0.13
CCDC13-204ENST00000472921 SWAP70Q9UH65 585 aa14.24□□□□□ -0.13
CCDC13-204ENST00000472921 SAP30BPQ9UHR5 308 aaKnown RBP14.24□□□□□ -0.13
CCDC13-204ENST00000472921 CNTNAP1P78357 1384 aa14.23□□□□□ -0.13
CCDC13-204ENST00000472921 CLRN2A0PK11 232 aa14.23□□□□□ -0.13
CCDC13-204ENST00000472921 IQCA1LA6NCM1 817 aa14.23□□□□□ -0.13
CCDC13-204ENST00000472921 DDTLA6NHG4 134 aaPredicted RBP14.23□□□□□ -0.13
CCDC13-204ENST00000472921 TBC1D12O60347 775 aa14.23□□□□□ -0.13
CCDC13-204ENST00000472921 CACNB3P54284 484 aa14.23□□□□□ -0.13
CCDC13-204ENST00000472921 RBM26Q5T8P6 1007 aaKnown RBP14.23□□□□□ -0.13
CCDC13-204ENST00000472921 ZC3H15Q8WU90 426 aaKnown RBP14.23□□□□□ -0.13
CCDC13-204ENST00000472921 ESR2Q92731 530 aa14.23□□□□□ -0.13
CCDC13-204ENST00000472921 TMEM87BQ96K49 555 aa14.23□□□□□ -0.13
CCDC13-204ENST00000472921 UPF3BQ9BZI7 483 aaKnown RBP14.23□□□□□ -0.13
CCDC13-204ENST00000472921 INCENPQ9NQS7 918 aa14.23□□□□□ -0.13
CCDC13-204ENST00000472921 ZSWIM5Q9P217 1185 aa14.23□□□□□ -0.13
CCDC13-204ENST00000472921 SERPINB13Q9UIV8 391 aa14.23□□□□□ -0.13
CCDC13-204ENST00000472921 HACL1Q9UJ83 578 aa14.23□□□□□ -0.13
CCDC13-204ENST00000472921 ADAMTSL1Q8N6G6 1762 aa14.23□□□□□ -0.13
CCDC13-204ENST00000472921 DDX60LQ5H9U9 1706 aaKnown RBP14.23□□□□□ -0.13
CCDC13-204ENST00000472921 FOCADQ5VW36 1801 aa14.22□□□□□ -0.13
CCDC13-204ENST00000472921 NEDD4P46934 1319 aa14.22□□□□□ -0.13
CCDC13-204ENST00000472921 POTECB2RU33 542 aa14.22□□□□□ -0.13
CCDC13-204ENST00000472921 TCP10L2B9ZVM9 353 aa14.22□□□□□ -0.13
CCDC13-204ENST00000472921 SMIM22K7EJ46 135 aa14.22□□□□□ -0.13
CCDC13-204ENST00000472921 CDK8P49336 464 aa14.22□□□□□ -0.13
CCDC13-204ENST00000472921 EVCP57679 992 aa14.22□□□□□ -0.13
CCDC13-204ENST00000472921 EVX2Q03828 476 aa14.22□□□□□ -0.13
CCDC13-204ENST00000472921 TCP10Q12799 353 aa14.22□□□□□ -0.13
CCDC13-204ENST00000472921 COL9A3Q14050 684 aaPredicted RBP14.22□□□□□ -0.13
CCDC13-204ENST00000472921 APOBEC3FQ8IUX4 373 aaKnown RBP14.22□□□□□ -0.13
CCDC13-204ENST00000472921 TRPM4Q8TD43 1214 aa14.22□□□□□ -0.13
CCDC13-204ENST00000472921 TCP11L1Q9NUJ3 509 aa14.22□□□□□ -0.13
CCDC13-204ENST00000472921 PPP2R3BQ9Y5P8 575 aa14.22□□□□□ -0.13
CCDC13-204ENST00000472921 LAMA4Q16363 1823 aa14.21□□□□□ -0.13
CCDC13-204ENST00000472921 B4E1Z4 1266 aa14.21□□□□□ -0.13
CCDC13-204ENST00000472921 CPA1P15085 419 aa14.21□□□□□ -0.13
CCDC13-204ENST00000472921 ANTXR2P58335 489 aa14.21□□□□□ -0.13
CCDC13-204ENST00000472921 BECN1Q14457 450 aa14.21□□□□□ -0.13
CCDC13-204ENST00000472921 TATDN1Q6P1N9 297 aa14.21□□□□□ -0.13
CCDC13-204ENST00000472921 CYB5R4Q7L1T6 521 aa14.21□□□□□ -0.13
CCDC13-204ENST00000472921 IGDCC4Q8TDY8 1250 aa14.21□□□□□ -0.13
CCDC13-204ENST00000472921 DYNLL2Q96FJ2 89 aa14.21□□□□□ -0.13
CCDC13-204ENST00000472921 TEPSINQ96N21 525 aa14.21□□□□□ -0.13
CCDC13-204ENST00000472921 TBC1D2Q9BYX2 928 aa14.21□□□□□ -0.13
CCDC13-204ENST00000472921 MKNK2Q9HBH9 465 aa14.21□□□□□ -0.13
CCDC13-204ENST00000472921 VEZTQ9HBM0 779 aa14.21□□□□□ -0.13
CCDC13-204ENST00000472921 HERC5Q9UII4 1024 aaKnown RBP14.21□□□□□ -0.13
CCDC13-204ENST00000472921 PRC1O43663 620 aa14.2□□□□□ -0.14
CCDC13-204ENST00000472921 KDM4AO75164 1064 aa14.2□□□□□ -0.14
CCDC13-204ENST00000472921 CD2BP2O95400 341 aaKnown RBP14.2□□□□□ -0.14
CCDC13-204ENST00000472921 RASA1P20936 1047 aa14.2□□□□□ -0.14
CCDC13-204ENST00000472921 EPHX2P34913 555 aa14.2□□□□□ -0.14
CCDC13-204ENST00000472921 LIFRP42702 1097 aa14.2□□□□□ -0.14
CCDC13-204ENST00000472921 AK2P54819 239 aa14.2□□□□□ -0.14
CCDC13-204ENST00000472921 TOB2Q14106 344 aaPredicted RBP14.2□□□□□ -0.14
CCDC13-204ENST00000472921 RASA3Q14644 834 aa14.2□□□□□ -0.14
CCDC13-204ENST00000472921 CCDC178Q5BJE1 867 aa14.2□□□□□ -0.14
CCDC13-204ENST00000472921 Q6ZUG5 572 aa14.2□□□□□ -0.14
CCDC13-204ENST00000472921 PNMA8AQ86V59 439 aaPredicted RBP14.2□□□□□ -0.14
CCDC13-204ENST00000472921 ZNF444Q8N0Y2 327 aaPredicted RBP14.2□□□□□ -0.14
CCDC13-204ENST00000472921 TMTC2Q8N394 836 aa14.2□□□□□ -0.14
CCDC13-204ENST00000472921 NKX2-3Q8TAU0 364 aa14.2□□□□□ -0.14
CCDC13-204ENST00000472921 ZSCAN31Q96LW9 406 aaPredicted RBP14.2□□□□□ -0.14
CCDC13-204ENST00000472921 CCDC17Q96LX7 622 aa14.2□□□□□ -0.14
CCDC13-204ENST00000472921 TAF1DQ9H5J8 278 aaPredicted RBP14.2□□□□□ -0.14
CCDC13-204ENST00000472921 LIMCH1Q9UPQ0 1083 aa14.2□□□□□ -0.14
CCDC13-204ENST00000472921 ECM29Q5VYK3 1845 aa14.2□□□□□ -0.14
CCDC13-204ENST00000472921 CDK5RAP2Q96SN8 1893 aa14.19□□□□□ -0.14
CCDC13-204ENST00000472921 WDR90Q96KV7 1748 aa14.19□□□□□ -0.14
CCDC13-204ENST00000472921 SHMT1P34896 483 aa14.19□□□□□ -0.14
CCDC13-204ENST00000472921 NOVP48745 357 aa14.19□□□□□ -0.14
CCDC13-204ENST00000472921 ANGEL2Q5VTE6 544 aaKnown RBP14.19□□□□□ -0.14
CCDC13-204ENST00000472921 SGMS1Q86VZ5 419 aa14.19□□□□□ -0.14
CCDC13-204ENST00000472921 IQCA1Q86XH1 822 aa14.19□□□□□ -0.14
CCDC13-204ENST00000472921 HSCBQ8IWL3 235 aa14.19□□□□□ -0.14
CCDC13-204ENST00000472921 ZSCAN29Q8IWY8 852 aaPredicted RBP14.19□□□□□ -0.14
CCDC13-204ENST00000472921 NEDD1Q8NHV4 660 aa14.19□□□□□ -0.14
CCDC13-204ENST00000472921 ANKS1AQ92625 1134 aa14.19□□□□□ -0.14
CCDC13-204ENST00000472921 IPO9Q96P70 1041 aaKnown RBP14.19□□□□□ -0.14
CCDC13-204ENST00000472921 CSRNP1Q96S65 589 aa14.19□□□□□ -0.14
CCDC13-204ENST00000472921 DEFB129Q9H1M3 183 aa14.19□□□□□ -0.14
CCDC13-204ENST00000472921 NAV1Q8NEY1 1877 aa14.18□□□□□ -0.14
CCDC13-204ENST00000472921 ASTN2O75129 1339 aaPredicted RBP14.18□□□□□ -0.14
CCDC13-204ENST00000472921 K7ELQ4 463 aaPredicted RBP14.18□□□□□ -0.14
CCDC13-204ENST00000472921 SH2B2O14492 632 aaPredicted RBP14.18□□□□□ -0.14
CCDC13-204ENST00000472921 RANBP6O60518 1105 aaKnown RBP14.18□□□□□ -0.14
CCDC13-204ENST00000472921 PRDM1O75626 825 aa14.18□□□□□ -0.14
CCDC13-204ENST00000472921 TFAP4Q01664 338 aa14.18□□□□□ -0.14
CCDC13-204ENST00000472921 SART3Q15020 963 aaKnown RBP14.18□□□□□ -0.14
CCDC13-204ENST00000472921 SEC23AQ15436 765 aa14.18□□□□□ -0.14
CCDC13-204ENST00000472921 RRP12Q5JTH9 1297 aaKnown RBP14.18□□□□□ -0.14
CCDC13-204ENST00000472921 DGKHQ86XP1 1220 aa14.18□□□□□ -0.14
CCDC13-204ENST00000472921 HOOK2Q96ED9 719 aa14.18□□□□□ -0.14
CCDC13-204ENST00000472921 ZNF274Q96GC6 653 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms