RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 CCDC178Q5BJE1 867 aa17.13■□□□□ 0.33
HIF3A-206ENST00000472815 LARP1BQ659C4 914 aaKnown RBP17.13■□□□□ 0.33
HIF3A-206ENST00000472815 MAPKAPK5Q8IW41 473 aa17.13■□□□□ 0.33
HIF3A-206ENST00000472815 STK11IPQ8N1F8 1099 aa17.13■□□□□ 0.33
HIF3A-206ENST00000472815 ZDHHC15Q96MV8 337 aa17.13■□□□□ 0.33
HIF3A-206ENST00000472815 TAOK3Q9H2K8 898 aa17.13■□□□□ 0.33
HIF3A-206ENST00000472815 LY9Q9HBG7 655 aa17.13■□□□□ 0.33
HIF3A-206ENST00000472815 SERPINA10Q9UK55 444 aa17.13■□□□□ 0.33
HIF3A-206ENST00000472815 DDX60LQ5H9U9 1706 aaKnown RBP17.12■□□□□ 0.33
HIF3A-206ENST00000472815 ZBTB43O43298 467 aa17.12■□□□□ 0.33
HIF3A-206ENST00000472815 USP17L8P0C7I0 530 aa17.12■□□□□ 0.33
HIF3A-206ENST00000472815 IARSP41252 1262 aaKnown RBP17.12■□□□□ 0.33
HIF3A-206ENST00000472815 CRKP46108 304 aa17.12■□□□□ 0.33
HIF3A-206ENST00000472815 METAP2P50579 478 aaKnown RBP eCLIP17.12■□□□□ 0.33
HIF3A-206ENST00000472815 CCT2P78371 535 aaKnown RBP17.12■□□□□ 0.33
HIF3A-206ENST00000472815 KIAA0825Q8IV33 1275 aa17.12■□□□□ 0.33
HIF3A-206ENST00000472815 MKNK2Q9HBH9 465 aa17.12■□□□□ 0.33
HIF3A-206ENST00000472815 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.12■□□□□ 0.33
HIF3A-206ENST00000472815 CYP2D7A0A087X1C5 515 aa17.11■□□□□ 0.33
HIF3A-206ENST00000472815 ZSCAN22P10073 491 aaPredicted RBP17.11■□□□□ 0.33
HIF3A-206ENST00000472815 SCNN1DP51172 638 aa17.11■□□□□ 0.33
HIF3A-206ENST00000472815 PKP1Q13835 747 aa17.11■□□□□ 0.33
HIF3A-206ENST00000472815 PPP2R5BQ15173 497 aa17.11■□□□□ 0.33
HIF3A-206ENST00000472815 APOA5Q6Q788 366 aa17.11■□□□□ 0.33
HIF3A-206ENST00000472815 TTC6Q86TZ1 520 aa17.11■□□□□ 0.33
HIF3A-206ENST00000472815 SMARCC2Q8TAQ2 1214 aa17.11■□□□□ 0.33
HIF3A-206ENST00000472815 ZSCAN10Q96SZ4 725 aaPredicted RBP17.11■□□□□ 0.33
HIF3A-206ENST00000472815 INCENPQ9NQS7 918 aa17.11■□□□□ 0.33
HIF3A-206ENST00000472815 ZNF277Q9NRM2 450 aaPredicted RBP17.11■□□□□ 0.33
HIF3A-206ENST00000472815 HDAC9Q9UKV0 1011 aa17.11■□□□□ 0.33
HIF3A-206ENST00000472815 CCDC196A0A1B0GTZ2 297 aa17.1■□□□□ 0.33
HIF3A-206ENST00000472815 TSPY2A6NKD2 308 aa17.1■□□□□ 0.33
HIF3A-206ENST00000472815 RBM5P52756 815 aaKnown RBP eCLIP17.1■□□□□ 0.33
HIF3A-206ENST00000472815 NSUN7Q8NE18 718 aaKnown RBP17.1■□□□□ 0.33
HIF3A-206ENST00000472815 JDP2Q8WYK2 163 aa17.1■□□□□ 0.33
HIF3A-206ENST00000472815 MXD3Q9BW11 206 aa17.1■□□□□ 0.33
HIF3A-206ENST00000472815 USP40Q9NVE5 1235 aa17.1■□□□□ 0.33
HIF3A-206ENST00000472815 BRPF3Q9ULD4 1205 aa17.1■□□□□ 0.33
HIF3A-206ENST00000472815 ZNRF3Q9ULT6 936 aa17.1■□□□□ 0.33
HIF3A-206ENST00000472815 TNKSO95271 1327 aa17.1■□□□□ 0.33
HIF3A-206ENST00000472815 BAG4O95429 457 aaKnown RBP17.1■□□□□ 0.33
HIF3A-206ENST00000472815 GPHNQ9NQX3 736 aaPredicted RBP17.1■□□□□ 0.33
HIF3A-206ENST00000472815 KCNQ5Q9NR82 932 aa17.1■□□□□ 0.33
HIF3A-206ENST00000472815 TACC3Q9Y6A5 838 aa17.1■□□□□ 0.33
HIF3A-206ENST00000472815 PTPDC1A2A3K4 754 aa17.09■□□□□ 0.33
HIF3A-206ENST00000472815 YDJCA8MPS7 323 aa17.09■□□□□ 0.33
HIF3A-206ENST00000472815 CALM1P0DP23 149 aa17.09■□□□□ 0.33
HIF3A-206ENST00000472815 CALM2P0DP24 149 aa17.09■□□□□ 0.33
HIF3A-206ENST00000472815 CALM3P0DP25 149 aa17.09■□□□□ 0.33
HIF3A-206ENST00000472815 IFIT1BQ5T764 474 aaKnown RBP17.09■□□□□ 0.33
HIF3A-206ENST00000472815 RSBN1LQ6PCB5 846 aaPredicted RBP17.09■□□□□ 0.33
HIF3A-206ENST00000472815 ZNF444Q8N0Y2 327 aaPredicted RBP17.09■□□□□ 0.33
HIF3A-206ENST00000472815 OGFOD1Q8N543 542 aa17.09■□□□□ 0.33
HIF3A-206ENST00000472815 TAOK2Q9UL54 1235 aa17.09■□□□□ 0.33
HIF3A-206ENST00000472815 ZDHHC9Q9Y397 364 aa17.09■□□□□ 0.33
HIF3A-206ENST00000472815 NID2Q14112 1375 aa17.09■□□□□ 0.33
HIF3A-206ENST00000472815 LTBP3Q9NS15 1303 aa17.08■□□□□ 0.33
HIF3A-206ENST00000472815 VPS37CA5D8V6 355 aaPredicted RBP17.08■□□□□ 0.32
HIF3A-206ENST00000472815 GOLGA8AA7E2F4 631 aa17.08■□□□□ 0.32
HIF3A-206ENST00000472815 H3BQV1 296 aa17.08■□□□□ 0.32
HIF3A-206ENST00000472815 PRDM1O75626 825 aa17.08■□□□□ 0.32
HIF3A-206ENST00000472815 HLA-DOAP06340 250 aa17.08■□□□□ 0.32
HIF3A-206ENST00000472815 VIL1P09327 827 aaKnown RBP17.08■□□□□ 0.32
HIF3A-206ENST00000472815 CYP2D6P10635 497 aa17.08■□□□□ 0.32
HIF3A-206ENST00000472815 MMP14P50281 582 aa17.08■□□□□ 0.32
HIF3A-206ENST00000472815 IFFO2Q5TF58 517 aa17.08■□□□□ 0.32
HIF3A-206ENST00000472815 APOBEC3HQ6NTF7 200 aaKnown RBP17.08■□□□□ 0.32
HIF3A-206ENST00000472815 MICU3Q86XE3 530 aa17.08■□□□□ 0.32
HIF3A-206ENST00000472815 ZKSCAN3Q9BRR0 538 aa17.08■□□□□ 0.32
HIF3A-206ENST00000472815 NCOA5Q9HCD5 579 aaKnown RBP17.08■□□□□ 0.32
HIF3A-206ENST00000472815 SAP30BPQ9UHR5 308 aaKnown RBP17.08■□□□□ 0.32
HIF3A-206ENST00000472815 HPS5Q9UPZ3 1129 aa17.08■□□□□ 0.32
HIF3A-206ENST00000472815 SBF1O95248 1867 aa17.08■□□□□ 0.32
HIF3A-206ENST00000472815 F13A1P00488 732 aa17.07■□□□□ 0.32
HIF3A-206ENST00000472815 PICALMQ13492 652 aa17.07■□□□□ 0.32
HIF3A-206ENST00000472815 CDC42EP5Q6NZY7 148 aa17.07■□□□□ 0.32
HIF3A-206ENST00000472815 C16orf86Q6ZW13 317 aa17.07■□□□□ 0.32
HIF3A-206ENST00000472815 CATIPQ7Z7H3 387 aa17.07■□□□□ 0.32
HIF3A-206ENST00000472815 MYH8P13535 1937 aa17.07■□□□□ 0.32
HIF3A-206ENST00000472815 JAK2O60674 1132 aa17.07■□□□□ 0.32
HIF3A-206ENST00000472815 NPM3O75607 178 aaKnown RBP17.07■□□□□ 0.32
HIF3A-206ENST00000472815 WDHD1O75717 1129 aaPredicted RBP17.07■□□□□ 0.32
HIF3A-206ENST00000472815 RGS22Q8NE09 1264 aa17.07■□□□□ 0.32
HIF3A-206ENST00000472815 AGBL3Q8NEM8 1001 aa17.07■□□□□ 0.32
HIF3A-206ENST00000472815 DHX36Q9H2U1 1008 aaKnown RBP17.07■□□□□ 0.32
HIF3A-206ENST00000472815 DICER1Q9UPY3 1922 aaKnown RBP17.07■□□□□ 0.32
HIF3A-206ENST00000472815 ADAMTSL1Q8N6G6 1762 aa17.06■□□□□ 0.32
HIF3A-206ENST00000472815 TSPY3P0CV98 308 aa17.06■□□□□ 0.32
HIF3A-206ENST00000472815 TSPY8P0CW00 308 aa17.06■□□□□ 0.32
HIF3A-206ENST00000472815 PLCD1P51178 756 aa17.06■□□□□ 0.32
HIF3A-206ENST00000472815 SEC23AQ15436 765 aa17.06■□□□□ 0.32
HIF3A-206ENST00000472815 SKOR2Q2VWA4 1001 aaPredicted RBP17.06■□□□□ 0.32
HIF3A-206ENST00000472815 FOXD4L5Q5VV16 416 aaPredicted RBP17.06■□□□□ 0.32
HIF3A-206ENST00000472815 ZNF654Q8IZM8 581 aa17.06■□□□□ 0.32
HIF3A-206ENST00000472815 ENAHQ8N8S7 591 aaPredicted RBP17.06■□□□□ 0.32
HIF3A-206ENST00000472815 FOXD4L4Q8WXT5 416 aaPredicted RBP17.06■□□□□ 0.32
HIF3A-206ENST00000472815 DDX11Q96FC9 970 aa17.06■□□□□ 0.32
HIF3A-206ENST00000472815 OSBPL5Q9H0X9 879 aaPredicted RBP17.06■□□□□ 0.32
HIF3A-206ENST00000472815 TMOD2Q9NZR1 351 aa17.06■□□□□ 0.32
HIF3A-206ENST00000472815 SWAP70Q9UH65 585 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms