RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 FBXO3Q9UK99 471 aa17.35■□□□□ 0.37
SMURF1-203ENST00000472627 DDTLA6NHG4 134 aaPredicted RBP17.34■□□□□ 0.37
SMURF1-203ENST00000472627 PFASO15067 1338 aa17.34■□□□□ 0.37
SMURF1-203ENST00000472627 HMGCS2P54868 508 aa17.34■□□□□ 0.37
SMURF1-203ENST00000472627 RFX7Q2KHR2 1363 aa17.34■□□□□ 0.37
SMURF1-203ENST00000472627 MAP3K21Q5TCX8 1036 aa17.34■□□□□ 0.37
SMURF1-203ENST00000472627 SH3BP5LQ7L8J4 393 aa17.34■□□□□ 0.37
SMURF1-203ENST00000472627 ASCC2Q9H1I8 757 aaPredicted RBP17.34■□□□□ 0.37
SMURF1-203ENST00000472627 CEP126Q9P2H0 1117 aa17.34■□□□□ 0.37
SMURF1-203ENST00000472627 MORF4L1Q9UBU8 362 aa17.34■□□□□ 0.37
SMURF1-203ENST00000472627 SALL2Q9Y467 1007 aaPredicted RBP17.34■□□□□ 0.37
SMURF1-203ENST00000472627 POTEB2H3BUK9 544 aa17.33■□□□□ 0.36
SMURF1-203ENST00000472627 BTDP43251 543 aa17.33■□□□□ 0.36
SMURF1-203ENST00000472627 TRIM32Q13049 653 aa17.33■□□□□ 0.36
SMURF1-203ENST00000472627 GUCD1Q96NT3 240 aa17.33■□□□□ 0.36
SMURF1-203ENST00000472627 CWC22Q9HCG8 908 aaKnown RBP17.33■□□□□ 0.36
SMURF1-203ENST00000472627 TMOD4Q9NZQ9 345 aa17.33■□□□□ 0.36
SMURF1-203ENST00000472627 ABCF2Q9UG63 623 aa17.33■□□□□ 0.36
SMURF1-203ENST00000472627 DOCK3Q8IZD9 2030 aa17.32■□□□□ 0.36
SMURF1-203ENST00000472627 PTPRCP08575 1304 aa17.32■□□□□ 0.36
SMURF1-203ENST00000472627 USP17L5A8MUK1 530 aa17.32■□□□□ 0.36
SMURF1-203ENST00000472627 NPM3O75607 178 aaKnown RBP17.32■□□□□ 0.36
SMURF1-203ENST00000472627 CIAO1O76071 339 aa17.32■□□□□ 0.36
SMURF1-203ENST00000472627 MAP4K4O95819 1239 aaPredicted RBP17.32■□□□□ 0.36
SMURF1-203ENST00000472627 COL6A1P12109 1028 aa17.32■□□□□ 0.36
SMURF1-203ENST00000472627 MAPK4P31152 587 aa17.32■□□□□ 0.36
SMURF1-203ENST00000472627 CCDC84Q86UT8 332 aaPredicted RBP17.32■□□□□ 0.36
SMURF1-203ENST00000472627 GPRC5AQ8NFJ5 357 aa17.32■□□□□ 0.36
SMURF1-203ENST00000472627 FAM163AQ96GL9 167 aaPredicted RBP17.32■□□□□ 0.36
SMURF1-203ENST00000472627 PHIPQ8WWQ0 1821 aa17.31■□□□□ 0.36
SMURF1-203ENST00000472627 LOC285556D6RIA3 1793 aa17.31■□□□□ 0.36
SMURF1-203ENST00000472627 ZBTB22O15209 634 aa17.31■□□□□ 0.36
SMURF1-203ENST00000472627 RGS2P41220 211 aa17.31■□□□□ 0.36
SMURF1-203ENST00000472627 GTF3C2Q8WUA4 911 aaPredicted RBP17.31■□□□□ 0.36
SMURF1-203ENST00000472627 SYMPKQ92797 1274 aaKnown RBP17.31■□□□□ 0.36
SMURF1-203ENST00000472627 FAM161BQ96MY7 647 aa17.31■□□□□ 0.36
SMURF1-203ENST00000472627 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.31■□□□□ 0.36
SMURF1-203ENST00000472627 MROH7-TTC4A0A0A0MT08 1334 aa17.3■□□□□ 0.36
SMURF1-203ENST00000472627 PDS5AQ29RF7 1337 aaKnown RBP17.3■□□□□ 0.36
SMURF1-203ENST00000472627 MYH2Q9UKX2 1941 aa17.3■□□□□ 0.36
SMURF1-203ENST00000472627 LRRC26Q2I0M4 334 aa17.3■□□□□ 0.36
SMURF1-203ENST00000472627 SH3D19Q5HYK7 790 aa17.3■□□□□ 0.36
SMURF1-203ENST00000472627 DDX4Q9NQI0 724 aaKnown RBP17.3■□□□□ 0.36
SMURF1-203ENST00000472627 PRDM6Q9NQX0 595 aa17.3■□□□□ 0.36
SMURF1-203ENST00000472627 CAP2P40123 477 aa17.29■□□□□ 0.36
SMURF1-203ENST00000472627 IL15P40933 162 aaPredicted RBP17.29■□□□□ 0.36
SMURF1-203ENST00000472627 PHKA1P46020 1223 aa17.29■□□□□ 0.36
SMURF1-203ENST00000472627 GSTO1P78417 241 aa17.29■□□□□ 0.36
SMURF1-203ENST00000472627 SIL1Q9H173 461 aa17.29■□□□□ 0.36
SMURF1-203ENST00000472627 HERC5Q9UII4 1024 aaKnown RBP17.29■□□□□ 0.36
SMURF1-203ENST00000472627 HDAC5Q9UQL6 1122 aa17.29■□□□□ 0.36
SMURF1-203ENST00000472627 COL2A1P02458 1487 aaPredicted RBP17.29■□□□□ 0.36
SMURF1-203ENST00000472627 MSCO60682 206 aa17.28■□□□□ 0.36
SMURF1-203ENST00000472627 GLRX3O76003 335 aaKnown RBP17.28■□□□□ 0.36
SMURF1-203ENST00000472627 LDHCP07864 332 aa17.28■□□□□ 0.36
SMURF1-203ENST00000472627 RFX5P48382 616 aaPredicted RBP17.28■□□□□ 0.36
SMURF1-203ENST00000472627 CACNB2Q08289 660 aaPredicted RBP17.28■□□□□ 0.36
SMURF1-203ENST00000472627 CCDC102BQ68D86 513 aa17.28■□□□□ 0.36
SMURF1-203ENST00000472627 ERICH6Q7L0X2 663 aa17.28■□□□□ 0.36
SMURF1-203ENST00000472627 ATG9AQ7Z3C6 839 aa17.28■□□□□ 0.36
SMURF1-203ENST00000472627 MAFAQ8NHW3 353 aaPredicted RBP17.28■□□□□ 0.36
SMURF1-203ENST00000472627 APBA2Q99767 749 aa17.28■□□□□ 0.36
SMURF1-203ENST00000472627 USP44Q9H0E7 712 aa17.28■□□□□ 0.36
SMURF1-203ENST00000472627 GPR75-ASB3A0A0A6YYF3 556 aa17.27■□□□□ 0.36
SMURF1-203ENST00000472627 FAM196BA6NMK8 535 aa17.27■□□□□ 0.36
SMURF1-203ENST00000472627 ASNSP08243 561 aa17.27■□□□□ 0.36
SMURF1-203ENST00000472627 HOXA7P31268 230 aaPredicted RBP17.27■□□□□ 0.36
SMURF1-203ENST00000472627 HERVK_113P62684 666 aa17.27■□□□□ 0.36
SMURF1-203ENST00000472627 MTMR2Q13614 643 aa17.27■□□□□ 0.36
SMURF1-203ENST00000472627 MFSD14CQ5VZR4 134 aa17.27■□□□□ 0.36
SMURF1-203ENST00000472627 NOL10Q9BSC4 688 aaKnown RBP17.27■□□□□ 0.36
SMURF1-203ENST00000472627 WDR18Q9BV38 432 aa17.27■□□□□ 0.36
SMURF1-203ENST00000472627 SENP6Q9GZR1 1112 aaPredicted RBP17.27■□□□□ 0.36
SMURF1-203ENST00000472627 C19orf81C9J6K1 198 aa17.26■□□□□ 0.35
SMURF1-203ENST00000472627 SLURP2P0DP57 97 aa17.26■□□□□ 0.35
SMURF1-203ENST00000472627 CCND3P30281 292 aaPredicted RBP17.26■□□□□ 0.35
SMURF1-203ENST00000472627 BACE1P56817 501 aa17.26■□□□□ 0.35
SMURF1-203ENST00000472627 LHX8Q68G74 356 aa17.26■□□□□ 0.35
SMURF1-203ENST00000472627 PLEKHH3Q7Z736 793 aa17.26■□□□□ 0.35
SMURF1-203ENST00000472627 CDX2Q99626 313 aaPredicted RBP17.26■□□□□ 0.35
SMURF1-203ENST00000472627 TRIM34Q9BYJ4 488 aa17.26■□□□□ 0.35
SMURF1-203ENST00000472627 MRS2Q9HD23 443 aa17.26■□□□□ 0.35
SMURF1-203ENST00000472627 UBTFL1P0CB47 393 aaPredicted RBP17.25■□□□□ 0.35
SMURF1-203ENST00000472627 CCNA1P78396 465 aa17.25■□□□□ 0.35
SMURF1-203ENST00000472627 MECOMQ03112 1051 aa17.25■□□□□ 0.35
SMURF1-203ENST00000472627 RASGRF1Q13972 1273 aa17.25■□□□□ 0.35
SMURF1-203ENST00000472627 MVPQ14764 893 aaKnown RBP17.25■□□□□ 0.35
SMURF1-203ENST00000472627 GPR142Q7Z601 462 aa17.25■□□□□ 0.35
SMURF1-203ENST00000472627 P2RX7Q99572 595 aaKnown RBP17.25■□□□□ 0.35
SMURF1-203ENST00000472627 DHX36Q9H2U1 1008 aaKnown RBP17.25■□□□□ 0.35
SMURF1-203ENST00000472627 GINM1Q9NU53 330 aa17.25■□□□□ 0.35
SMURF1-203ENST00000472627 PI4KBQ9UBF8 816 aa17.25■□□□□ 0.35
SMURF1-203ENST00000472627 RHBDL3P58872 404 aa17.24■□□□□ 0.35
SMURF1-203ENST00000472627 ERVK-9P63128 1117 aa17.24■□□□□ 0.35
SMURF1-203ENST00000472627 ERVK-24P63145 666 aa17.24■□□□□ 0.35
SMURF1-203ENST00000472627 PAGR1Q9BTK6 254 aa17.24■□□□□ 0.35
SMURF1-203ENST00000472627 AKAP2Q9Y2D5 859 aa17.24■□□□□ 0.35
SMURF1-203ENST00000472627 USP17L10C9JJH3 530 aa17.23■□□□□ 0.35
SMURF1-203ENST00000472627 DNM1LO00429 736 aa17.23■□□□□ 0.35
SMURF1-203ENST00000472627 CCDC184Q52MB2 194 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms