RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 PCP11498 1178 aaKnown RBP20■□□□□ 0.79
CCM2-205ENST00000472223 PLCD1P51178 756 aa20■□□□□ 0.79
CCM2-205ENST00000472223 HAND2P61296 217 aa20■□□□□ 0.79
CCM2-205ENST00000472223 KRT32Q14532 448 aa20■□□□□ 0.79
CCM2-205ENST00000472223 MFSD6Q6ZSS7 791 aa20■□□□□ 0.79
CCM2-205ENST00000472223 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20■□□□□ 0.79
CCM2-205ENST00000472223 TOMM22Q9NS69 142 aa20■□□□□ 0.79
CCM2-205ENST00000472223 ANAPC4Q9UJX5 808 aa20■□□□□ 0.79
CCM2-205ENST00000472223 KIF3CO14782 793 aa19.99■□□□□ 0.79
CCM2-205ENST00000472223 CYP2D6P10635 497 aa19.99■□□□□ 0.79
CCM2-205ENST00000472223 NECTIN1Q15223 517 aa19.99■□□□□ 0.79
CCM2-205ENST00000472223 NBPF12Q5TAG4 269 aaPredicted RBP19.99■□□□□ 0.79
CCM2-205ENST00000472223 CREB3L3Q68CJ9 461 aa19.99■□□□□ 0.79
CCM2-205ENST00000472223 ZNF444Q8N0Y2 327 aaPredicted RBP19.99■□□□□ 0.79
CCM2-205ENST00000472223 CDCA5Q96FF9 252 aa19.99■□□□□ 0.79
CCM2-205ENST00000472223 CYP2D7A0A087X1C5 515 aa19.98■□□□□ 0.79
CCM2-205ENST00000472223 TBC1D12O60347 775 aa19.98■□□□□ 0.79
CCM2-205ENST00000472223 SEC24BO95487 1268 aa19.98■□□□□ 0.79
CCM2-205ENST00000472223 HSPA4P34932 840 aa19.98■□□□□ 0.79
CCM2-205ENST00000472223 NT5C2P49902 561 aa19.98■□□□□ 0.79
CCM2-205ENST00000472223 CTDSPL2Q05D32 466 aa19.98■□□□□ 0.79
CCM2-205ENST00000472223 TTLL12Q14166 644 aaPredicted RBP19.98■□□□□ 0.79
CCM2-205ENST00000472223 PRAMEF18Q5VWM3 479 aa19.98■□□□□ 0.79
CCM2-205ENST00000472223 SH3BP5LQ7L8J4 393 aa19.98■□□□□ 0.79
CCM2-205ENST00000472223 STK11IPQ8N1F8 1099 aa19.98■□□□□ 0.79
CCM2-205ENST00000472223 RBM46Q8TBY0 533 aaKnown RBP19.98■□□□□ 0.79
CCM2-205ENST00000472223 TEPSINQ96N21 525 aa19.98■□□□□ 0.79
CCM2-205ENST00000472223 ZNF341Q9BYN7 854 aa19.98■□□□□ 0.79
CCM2-205ENST00000472223 CNNM2Q9H8M5 875 aa19.98■□□□□ 0.79
CCM2-205ENST00000472223 LAMB1P07942 1786 aa19.98■□□□□ 0.79
CCM2-205ENST00000472223 SLC27A2O14975 620 aa19.97■□□□□ 0.79
CCM2-205ENST00000472223 AKNAD1Q5T1N1 836 aa19.97■□□□□ 0.79
CCM2-205ENST00000472223 MIGA2Q7L4E1 593 aa19.97■□□□□ 0.79
CCM2-205ENST00000472223 RALYLQ86SE5 291 aaKnown RBP19.97■□□□□ 0.79
CCM2-205ENST00000472223 KRT23Q9C075 422 aa19.97■□□□□ 0.79
CCM2-205ENST00000472223 ZNF408Q9H9D4 720 aa19.97■□□□□ 0.79
CCM2-205ENST00000472223 CYP21A2P08686 494 aa19.96■□□□□ 0.79
CCM2-205ENST00000472223 C16orf86Q6ZW13 317 aa19.96■□□□□ 0.79
CCM2-205ENST00000472223 ARMC9Q7Z3E5 817 aa19.96■□□□□ 0.79
CCM2-205ENST00000472223 C22orf23Q9BZE7 217 aa19.96■□□□□ 0.79
CCM2-205ENST00000472223 PSMA5P28066 241 aa19.95■□□□□ 0.78
CCM2-205ENST00000472223 IREB2P48200 963 aaKnown RBP19.95■□□□□ 0.78
CCM2-205ENST00000472223 CDK8P49336 464 aa19.95■□□□□ 0.78
CCM2-205ENST00000472223 FSTL1Q12841 308 aa19.95■□□□□ 0.78
CCM2-205ENST00000472223 RRP12Q5JTH9 1297 aaKnown RBP19.95■□□□□ 0.78
CCM2-205ENST00000472223 NCOA7Q8NI08 942 aa19.95■□□□□ 0.78
CCM2-205ENST00000472223 STAG1Q8WVM7 1258 aa19.95■□□□□ 0.78
CCM2-205ENST00000472223 DYNLL2Q96FJ2 89 aa19.95■□□□□ 0.78
CCM2-205ENST00000472223 DDX60LQ5H9U9 1706 aaKnown RBP19.95■□□□□ 0.78
CCM2-205ENST00000472223 LAMA4Q16363 1823 aa19.95■□□□□ 0.78
CCM2-205ENST00000472223 ROBO3Q96MS0 1386 aa19.95■□□□□ 0.78
CCM2-205ENST00000472223 MYH8P13535 1937 aa19.94■□□□□ 0.78
CCM2-205ENST00000472223 ANAPC15P60006 121 aa19.94■□□□□ 0.78
CCM2-205ENST00000472223 CERKLQ49MI3 558 aaPredicted RBP19.94■□□□□ 0.78
CCM2-205ENST00000472223 METTL16Q86W50 562 aaKnown RBP19.94■□□□□ 0.78
CCM2-205ENST00000472223 C2orf69Q8N8R5 385 aa19.94■□□□□ 0.78
CCM2-205ENST00000472223 ESR2Q92731 530 aa19.94■□□□□ 0.78
CCM2-205ENST00000472223 CCDC17Q96LX7 622 aa19.94■□□□□ 0.78
CCM2-205ENST00000472223 CABP5Q9NP86 173 aa19.94■□□□□ 0.78
CCM2-205ENST00000472223 E7EWF7 191 aa19.93■□□□□ 0.78
CCM2-205ENST00000472223 TRAF5O00463 557 aa19.93■□□□□ 0.78
CCM2-205ENST00000472223 RANBP6O60518 1105 aaKnown RBP19.93■□□□□ 0.78
CCM2-205ENST00000472223 HMGB1P09429 215 aaKnown RBP19.93■□□□□ 0.78
CCM2-205ENST00000472223 PRKG1Q13976 671 aa19.93■□□□□ 0.78
CCM2-205ENST00000472223 TSPY2A6NKD2 308 aa19.92■□□□□ 0.78
CCM2-205ENST00000472223 MPHOSPH10O00566 681 aaKnown RBP19.92■□□□□ 0.78
CCM2-205ENST00000472223 ORC4O43929 436 aa19.92■□□□□ 0.78
CCM2-205ENST00000472223 CELF2O95319 508 aaKnown RBP19.92■□□□□ 0.78
CCM2-205ENST00000472223 TSPY3P0CV98 308 aa19.92■□□□□ 0.78
CCM2-205ENST00000472223 TSPY8P0CW00 308 aa19.92■□□□□ 0.78
CCM2-205ENST00000472223 FKBP1BP68106 108 aa19.92■□□□□ 0.78
CCM2-205ENST00000472223 MAP3K10Q02779 954 aa19.92■□□□□ 0.78
CCM2-205ENST00000472223 GABPAQ06546 454 aa19.92■□□□□ 0.78
CCM2-205ENST00000472223 TSGA10IPQ3SY00 556 aa19.92■□□□□ 0.78
CCM2-205ENST00000472223 CDAN1Q8IWY9 1227 aa19.92■□□□□ 0.78
CCM2-205ENST00000472223 ANGEL1Q9UNK9 670 aaKnown RBP19.92■□□□□ 0.78
CCM2-205ENST00000472223 FAM196BA6NMK8 535 aa19.91■□□□□ 0.78
CCM2-205ENST00000472223 PRDM1O75626 825 aa19.91■□□□□ 0.78
CCM2-205ENST00000472223 ITGBL1O95965 494 aaPredicted RBP19.91■□□□□ 0.78
CCM2-205ENST00000472223 PPP4R3BQ5MIZ7 849 aa19.91■□□□□ 0.78
CCM2-205ENST00000472223 TATDN1Q6P1N9 297 aa19.91■□□□□ 0.78
CCM2-205ENST00000472223 TBC1D10CQ8IV04 446 aa19.91■□□□□ 0.78
CCM2-205ENST00000472223 NEK1Q96PY6 1258 aa19.91■□□□□ 0.78
CCM2-205ENST00000472223 WRNIP1Q96S55 665 aa19.91■□□□□ 0.78
CCM2-205ENST00000472223 GINM1Q9NU53 330 aa19.91■□□□□ 0.78
CCM2-205ENST00000472223 SNX14Q9Y5W7 946 aa19.91■□□□□ 0.78
CCM2-205ENST00000472223 CSADQ9Y600 493 aa19.91■□□□□ 0.78
CCM2-205ENST00000472223 CTNND1O60716 968 aaKnown RBP19.9■□□□□ 0.78
CCM2-205ENST00000472223 SART3Q15020 963 aaKnown RBP19.9■□□□□ 0.78
CCM2-205ENST00000472223 ABCB5Q2M3G0 1257 aa19.9■□□□□ 0.78
CCM2-205ENST00000472223 CCDC178Q5BJE1 867 aa19.9■□□□□ 0.78
CCM2-205ENST00000472223 DLK2Q6UY11 383 aa19.9■□□□□ 0.78
CCM2-205ENST00000472223 IQCA1Q86XH1 822 aa19.9■□□□□ 0.78
CCM2-205ENST00000472223 SLC44A5Q8NCS7 719 aa19.9■□□□□ 0.78
CCM2-205ENST00000472223 KCNB2Q92953 911 aa19.9■□□□□ 0.78
CCM2-205ENST00000472223 JAKMIP1Q96N16 626 aaKnown RBP19.9■□□□□ 0.78
CCM2-205ENST00000472223 GBA2Q9HCG7 927 aaPredicted RBP19.9■□□□□ 0.78
CCM2-205ENST00000472223 PICK1Q9NRD5 415 aa19.9■□□□□ 0.78
CCM2-205ENST00000472223 ERICH2A1L162 156 aa19.89■□□□□ 0.77
CCM2-205ENST00000472223 ASNSP08243 561 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms