RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 PIH1D3Q9NQM4 214 aaKnown RBP27.58■■■□□ 2.01
C9orf3-213ENST00000471978 EXOC6BQ9Y2D4 811 aa27.58■■■□□ 2.01
C9orf3-213ENST00000471978 IGSF3O75054 1194 aa27.57■■■□□ 2
C9orf3-213ENST00000471978 ERC1Q8IUD2 1116 aa27.57■■■□□ 2
C9orf3-213ENST00000471978 KIAA0100Q14667 2235 aaKnown RBP27.57■■■□□ 2
C9orf3-213ENST00000471978 RBBP6Q7Z6E9 1792 aaKnown RBP27.56■■■□□ 2
C9orf3-213ENST00000471978 FMNL1O95466 1100 aaPredicted RBP27.56■■■□□ 2
C9orf3-213ENST00000471978 PRPF38BQ5VTL8 546 aaKnown RBP27.56■■■□□ 2
C9orf3-213ENST00000471978 SH3TC2Q8TF17 1288 aa27.56■■■□□ 2
C9orf3-213ENST00000471978 TGFBRAP1Q8WUH2 860 aa27.56■■■□□ 2
C9orf3-213ENST00000471978 DHX36Q9H2U1 1008 aaKnown RBP27.56■■■□□ 2
C9orf3-213ENST00000471978 HERC5Q9UII4 1024 aaKnown RBP27.56■■■□□ 2
C9orf3-213ENST00000471978 SLC45A1Q9Y2W3 748 aa27.56■■■□□ 2
C9orf3-213ENST00000471978 PHIPQ8WWQ0 1821 aa27.55■■■□□ 2
C9orf3-213ENST00000471978 BCRP11274 1271 aa27.55■■■□□ 2
C9orf3-213ENST00000471978 EN2P19622 333 aaPredicted RBP27.55■■■□□ 2
C9orf3-213ENST00000471978 HOXD10P28358 340 aa27.55■■■□□ 2
C9orf3-213ENST00000471978 PI4KBQ9UBF8 816 aa27.55■■■□□ 2
C9orf3-213ENST00000471978 SRRDQ9UH36 339 aa27.55■■■□□ 2
C9orf3-213ENST00000471978 MYCP01106 439 aaPredicted RBP27.54■■■□□ 2
C9orf3-213ENST00000471978 CAP2P40123 477 aa27.54■■■□□ 2
C9orf3-213ENST00000471978 AACSQ86V21 672 aa27.54■■■□□ 2
C9orf3-213ENST00000471978 MAPKAPK5Q8IW41 473 aa27.54■■■□□ 2
C9orf3-213ENST00000471978 FLT1P17948 1338 aa27.53■■■□□ 2
C9orf3-213ENST00000471978 OSBPP22059 807 aa27.53■■■□□ 2
C9orf3-213ENST00000471978 RRP1BQ14684 758 aaKnown RBP27.53■■■□□ 2
C9orf3-213ENST00000471978 SLC4A8Q2Y0W8 1093 aa27.53■■■□□ 2
C9orf3-213ENST00000471978 HSP90AB4PQ58FF6 505 aa27.53■■■□□ 2
C9orf3-213ENST00000471978 PTPRFP10586 1907 aa27.53■■■□□ 2
C9orf3-213ENST00000471978 MYO5AQ9Y4I1 1855 aaKnown RBP27.53■■■□□ 2
C9orf3-213ENST00000471978 IDH1O75874 414 aaKnown RBP27.52■■■□□ 2
C9orf3-213ENST00000471978 CYP7A1P22680 504 aa27.52■■■□□ 2
C9orf3-213ENST00000471978 SPP2Q13103 211 aa27.52■■■□□ 2
C9orf3-213ENST00000471978 AGTPBP1Q9UPW5 1226 aa27.52■■■□□ 2
C9orf3-213ENST00000471978 FCGRTP55899 365 aa27.51■■□□□ 1.99
C9orf3-213ENST00000471978 ZNF280CQ8ND82 737 aa27.51■■□□□ 1.99
C9orf3-213ENST00000471978 RAET1EQ8TD07 263 aa27.51■■□□□ 1.99
C9orf3-213ENST00000471978 SMCR8Q8TEV9 937 aaPredicted RBP27.51■■□□□ 1.99
C9orf3-213ENST00000471978 TBC1D2Q9BYX2 928 aa27.51■■□□□ 1.99
C9orf3-213ENST00000471978 NDUFB9Q9Y6M9 179 aa27.51■■□□□ 1.99
C9orf3-213ENST00000471978 MYPNQ86TC9 1320 aa27.5■■□□□ 1.99
C9orf3-213ENST00000471978 DYNLL1P63167 89 aaKnown RBP27.5■■□□□ 1.99
C9orf3-213ENST00000471978 IL1RAPL2Q9NP60 686 aa27.5■■□□□ 1.99
C9orf3-213ENST00000471978 DDX19BQ9UMR2 479 aa27.5■■□□□ 1.99
C9orf3-213ENST00000471978 COG6Q9Y2V7 657 aa27.5■■□□□ 1.99
C9orf3-213ENST00000471978 USP17L5A8MUK1 530 aa27.49■■□□□ 1.99
C9orf3-213ENST00000471978 TREML2Q5T2D2 321 aa27.49■■□□□ 1.99
C9orf3-213ENST00000471978 RPAP2Q8IXW5 612 aaPredicted RBP27.49■■□□□ 1.99
C9orf3-213ENST00000471978 PROCA1Q8NCQ7 364 aaPredicted RBP27.49■■□□□ 1.99
C9orf3-213ENST00000471978 RHPN1Q8TCX5 695 aa27.49■■□□□ 1.99
C9orf3-213ENST00000471978 PALD1Q9ULE6 856 aa27.49■■□□□ 1.99
C9orf3-213ENST00000471978 ATAD5Q96QE3 1844 aa27.48■■□□□ 1.99
C9orf3-213ENST00000471978 FOXP4Q8IVH2 680 aaPredicted RBP27.48■■□□□ 1.99
C9orf3-213ENST00000471978 CRACR2BQ8N4Y2 399 aaPredicted RBP27.48■■□□□ 1.99
C9orf3-213ENST00000471978 MAGEB6Q8N7X4 407 aa27.48■■□□□ 1.99
C9orf3-213ENST00000471978 TRIM34Q9BYJ4 488 aa27.48■■□□□ 1.99
C9orf3-213ENST00000471978 ANTXR1Q9H6X2 564 aa27.48■■□□□ 1.99
C9orf3-213ENST00000471978 SAP30BPQ9UHR5 308 aaKnown RBP27.48■■□□□ 1.99
C9orf3-213ENST00000471978 CDK5RAP2Q96SN8 1893 aa27.47■■□□□ 1.99
C9orf3-213ENST00000471978 SIPA1L1O43166 1804 aa27.47■■□□□ 1.99
C9orf3-213ENST00000471978 HMGCS2P54868 508 aa27.47■■□□□ 1.99
C9orf3-213ENST00000471978 PRKCZQ05513 592 aa27.47■■□□□ 1.99
C9orf3-213ENST00000471978 MAP3K12Q12852 859 aa27.47■■□□□ 1.99
C9orf3-213ENST00000471978 METTL16Q86W50 562 aaKnown RBP27.47■■□□□ 1.99
C9orf3-213ENST00000471978 MIGA1Q8NAN2 632 aa27.47■■□□□ 1.99
C9orf3-213ENST00000471978 AS3MTQ9HBK9 375 aa27.47■■□□□ 1.99
C9orf3-213ENST00000471978 ZBTB40Q9NUA8 1239 aa27.47■■□□□ 1.99
C9orf3-213ENST00000471978 PNMA3Q9UL41 463 aa27.47■■□□□ 1.99
C9orf3-213ENST00000471978 FOCADQ5VW36 1801 aa27.46■■□□□ 1.99
C9orf3-213ENST00000471978 APBB1O00213 710 aa27.46■■□□□ 1.99
C9orf3-213ENST00000471978 HMMRO75330 724 aa27.46■■□□□ 1.99
C9orf3-213ENST00000471978 GRK4P32298 578 aa27.46■■□□□ 1.99
C9orf3-213ENST00000471978 CERS3Q8IU89 383 aa27.46■■□□□ 1.99
C9orf3-213ENST00000471978 DNAJC18Q9H819 358 aa27.46■■□□□ 1.99
C9orf3-213ENST00000471978 RCAN3Q9UKA8 241 aa27.46■■□□□ 1.99
C9orf3-213ENST00000471978 SLC34A2O95436 690 aa27.45■■□□□ 1.98
C9orf3-213ENST00000471978 HLA-DOAP06340 250 aa27.45■■□□□ 1.98
C9orf3-213ENST00000471978 ASNSP08243 561 aa27.45■■□□□ 1.98
C9orf3-213ENST00000471978 KIF1BPQ96EK5 621 aa27.45■■□□□ 1.98
C9orf3-213ENST00000471978 PABPC4Q13310 644 aaKnown RBP eCLIP27.44■■□□□ 1.98
C9orf3-213ENST00000471978 MTFR1Q15390 333 aa27.44■■□□□ 1.98
C9orf3-213ENST00000471978 SIRT2Q8IXJ6 389 aa27.44■■□□□ 1.98
C9orf3-213ENST00000471978 CLASRPQ8N2M8 674 aaKnown RBP27.44■■□□□ 1.98
C9orf3-213ENST00000471978 ANKRD13CQ8N6S4 541 aa27.44■■□□□ 1.98
C9orf3-213ENST00000471978 WDR18Q9BV38 432 aa27.44■■□□□ 1.98
C9orf3-213ENST00000471978 GABRQQ9UN88 632 aa27.44■■□□□ 1.98
C9orf3-213ENST00000471978 MGAMO43451 1857 aa27.44■■□□□ 1.98
C9orf3-213ENST00000471978 LOC285556D6RIA3 1793 aa27.43■■□□□ 1.98
C9orf3-213ENST00000471978 USP5P45974 858 aa27.43■■□□□ 1.98
C9orf3-213ENST00000471978 JAG1P78504 1218 aa27.43■■□□□ 1.98
C9orf3-213ENST00000471978 SH3D19Q5HYK7 790 aa27.43■■□□□ 1.98
C9orf3-213ENST00000471978 TMED8Q6PL24 325 aaPredicted RBP27.43■■□□□ 1.98
C9orf3-213ENST00000471978 CHMP4BQ9H444 224 aaKnown RBP27.43■■□□□ 1.98
C9orf3-213ENST00000471978 BIN2Q9UBW5 565 aaPredicted RBP27.43■■□□□ 1.98
C9orf3-213ENST00000471978 TNPO2O14787 897 aaKnown RBP27.42■■□□□ 1.98
C9orf3-213ENST00000471978 GDF11O95390 407 aa27.42■■□□□ 1.98
C9orf3-213ENST00000471978 BCL11AQ9H165 835 aa27.42■■□□□ 1.98
C9orf3-213ENST00000471978 IFIT2P09913 472 aaKnown RBP27.41■■□□□ 1.98
C9orf3-213ENST00000471978 BACE1P56817 501 aa27.41■■□□□ 1.98
C9orf3-213ENST00000471978 MTMR2Q13614 643 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms