RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 CD19P15391 556 aa9.62□□□□□ -0.87
CD47-204ENST00000471694 ZNF830Q96NB3 372 aaPredicted RBP9.62□□□□□ -0.87
CD47-204ENST00000471694 DDX21Q9NR30 783 aaKnown RBP eCLIP9.62□□□□□ -0.87
CD47-204ENST00000471694 MAP3K19Q56UN5 1328 aa9.62□□□□□ -0.87
CD47-204ENST00000471694 TSTA3Q13630 321 aaPredicted RBP9.61□□□□□ -0.87
CD47-204ENST00000471694 TBC1D10BQ4KMP7 808 aaPredicted RBP9.61□□□□□ -0.87
CD47-204ENST00000471694 TTC30BQ8N4P2 665 aa9.61□□□□□ -0.87
CD47-204ENST00000471694 TSPYL2Q9H2G4 693 aaPredicted RBP9.61□□□□□ -0.87
CD47-204ENST00000471694 AFG3L2Q9Y4W6 797 aa9.61□□□□□ -0.87
CD47-204ENST00000471694 RBM8AQ9Y5S9 174 aaKnown RBP9.61□□□□□ -0.87
CD47-204ENST00000471694 BICDL2A1A5D9 508 aa9.61□□□□□ -0.87
CD47-204ENST00000471694 CTSWP56202 376 aa9.61□□□□□ -0.87
CD47-204ENST00000471694 FAM43AQ8N2R8 423 aa9.61□□□□□ -0.87
CD47-204ENST00000471694 DPF3Q92784 378 aa9.61□□□□□ -0.87
CD47-204ENST00000471694 MEIS3Q99687 375 aa9.61□□□□□ -0.87
CD47-204ENST00000471694 NRBP2Q9NSY0 501 aa9.61□□□□□ -0.87
CD47-204ENST00000471694 BTDP43251 543 aa9.61□□□□□ -0.87
CD47-204ENST00000471694 FASTKD5Q7L8L6 764 aaKnown RBP9.61□□□□□ -0.87
CD47-204ENST00000471694 PPP2R3CQ969Q6 453 aa9.61□□□□□ -0.87
CD47-204ENST00000471694 PTPRKQ15262 1439 aa9.61□□□□□ -0.87
CD47-204ENST00000471694 PRDM1O75626 825 aa9.61□□□□□ -0.87
CD47-204ENST00000471694 LIN9Q5TKA1 542 aa9.61□□□□□ -0.87
CD47-204ENST00000471694 NEK11Q8NG66 645 aa9.61□□□□□ -0.87
CD47-204ENST00000471694 ADD3Q9UEY8 706 aaKnown RBP9.61□□□□□ -0.87
CD47-204ENST00000471694 SLC8A2Q9UPR5 921 aa9.61□□□□□ -0.87
CD47-204ENST00000471694 ABCC2Q92887 1545 aa9.61□□□□□ -0.87
CD47-204ENST00000471694 GAS7O60861 476 aa9.61□□□□□ -0.87
CD47-204ENST00000471694 TXKP42681 527 aa9.61□□□□□ -0.87
CD47-204ENST00000471694 ICA1Q05084 483 aa9.61□□□□□ -0.87
CD47-204ENST00000471694 MAP9Q49MG5 647 aa9.61□□□□□ -0.87
CD47-204ENST00000471694 TPH2Q8IWU9 490 aa9.61□□□□□ -0.87
CD47-204ENST00000471694 YAF2Q8IY57 180 aa9.61□□□□□ -0.87
CD47-204ENST00000471694 WDR17Q8IZU2 1322 aa9.61□□□□□ -0.87
CD47-204ENST00000471694 EYA2O00167 538 aa9.61□□□□□ -0.87
CD47-204ENST00000471694 TLR3O15455 904 aaKnown RBP9.61□□□□□ -0.87
CD47-204ENST00000471694 ZNF174Q15697 407 aa9.61□□□□□ -0.87
CD47-204ENST00000471694 SYNDIG1Q9H7V2 258 aa9.61□□□□□ -0.87
CD47-204ENST00000471694 NKTRP30414 1462 aaKnown RBP9.6□□□□□ -0.87
CD47-204ENST00000471694 TNNC2P02585 160 aa9.6□□□□□ -0.87
CD47-204ENST00000471694 NPR1P16066 1061 aa9.6□□□□□ -0.87
CD47-204ENST00000471694 ATP2A2P16615 1042 aaKnown RBP9.6□□□□□ -0.87
CD47-204ENST00000471694 ZNF157P51786 506 aaPredicted RBP9.6□□□□□ -0.87
CD47-204ENST00000471694 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.6□□□□□ -0.87
CD47-204ENST00000471694 POLGP54098 1239 aaPredicted RBP9.6□□□□□ -0.87
CD47-204ENST00000471694 GCKRQ14397 625 aa9.6□□□□□ -0.87
CD47-204ENST00000471694 NECAB1Q8N987 351 aa9.6□□□□□ -0.87
CD47-204ENST00000471694 PPANQ9NQ55 473 aaKnown RBP9.6□□□□□ -0.87
CD47-204ENST00000471694 PNMA2Q9UL42 364 aa9.6□□□□□ -0.87
CD47-204ENST00000471694 ZNF215Q9UL58 517 aaPredicted RBP9.6□□□□□ -0.87
CD47-204ENST00000471694 B4E1Z4 1266 aa9.6□□□□□ -0.87
CD47-204ENST00000471694 GIPC1O14908 333 aa9.6□□□□□ -0.87
CD47-204ENST00000471694 TNNI1P19237 187 aa9.6□□□□□ -0.87
CD47-204ENST00000471694 TRIM27P14373 513 aa9.6□□□□□ -0.87
CD47-204ENST00000471694 KIF11P52732 1056 aa9.6□□□□□ -0.87
CD47-204ENST00000471694 INF2Q27J81 1249 aa9.6□□□□□ -0.87
CD47-204ENST00000471694 MIGA2Q7L4E1 593 aa9.6□□□□□ -0.87
CD47-204ENST00000471694 CFAP74Q9C0B2 1584 aa9.6□□□□□ -0.87
CD47-204ENST00000471694 XDHP47989 1333 aa9.6□□□□□ -0.87
CD47-204ENST00000471694 MCM3P25205 808 aa9.6□□□□□ -0.87
CD47-204ENST00000471694 TIMM10P62072 90 aa9.6□□□□□ -0.87
CD47-204ENST00000471694 YWHAEP62258 255 aaKnown RBP9.6□□□□□ -0.87
CD47-204ENST00000471694 CTDSPL2Q05D32 466 aa9.6□□□□□ -0.87
CD47-204ENST00000471694 TFDP1Q14186 410 aa9.6□□□□□ -0.87
CD47-204ENST00000471694 MAATS1Q7Z4T9 603 aa9.6□□□□□ -0.87
CD47-204ENST00000471694 NLRP7Q8WX94 980 aa9.6□□□□□ -0.87
CD47-204ENST00000471694 GBP3Q9H0R5 595 aa9.6□□□□□ -0.87
CD47-204ENST00000471694 DNM3Q9UQ16 869 aa9.6□□□□□ -0.87
CD47-204ENST00000471694 KIF21AQ7Z4S6 1674 aa9.59□□□□□ -0.87
CD47-204ENST00000471694 MRE11P49959 708 aa9.59□□□□□ -0.87
CD47-204ENST00000471694 MXRA7P84157 204 aa9.59□□□□□ -0.87
CD47-204ENST00000471694 PPFIA1Q13136 1202 aa9.59□□□□□ -0.87
CD47-204ENST00000471694 STX1AQ16623 288 aa9.59□□□□□ -0.87
CD47-204ENST00000471694 EEPD1Q7L9B9 569 aa9.59□□□□□ -0.87
CD47-204ENST00000471694 CCDC155Q8N6L0 562 aa9.59□□□□□ -0.87
CD47-204ENST00000471694 SKA2Q8WVK7 121 aaPredicted RBP9.59□□□□□ -0.87
CD47-204ENST00000471694 LMBR1Q8WVP7 490 aa9.59□□□□□ -0.87
CD47-204ENST00000471694 TCEANC2Q96MN5 208 aa9.59□□□□□ -0.87
CD47-204ENST00000471694 KCNJ6P48051 423 aa9.59□□□□□ -0.87
CD47-204ENST00000471694 ODR4Q5SWX8 454 aa9.59□□□□□ -0.87
CD47-204ENST00000471694 ZNF449Q6P9G9 518 aa9.59□□□□□ -0.87
CD47-204ENST00000471694 TMC6Q7Z403 805 aa9.59□□□□□ -0.87
CD47-204ENST00000471694 NBPF11Q86T75 865 aa9.59□□□□□ -0.87
CD47-204ENST00000471694 KIF28PB7ZC32 967 aa9.59□□□□□ -0.87
CD47-204ENST00000471694 GMNNO75496 209 aa9.59□□□□□ -0.87
CD47-204ENST00000471694 ATP8B2P98198 1209 aa9.59□□□□□ -0.87
CD47-204ENST00000471694 PSMD2Q13200 908 aa9.59□□□□□ -0.87
CD47-204ENST00000471694 FAM47AQ5JRC9 791 aa9.59□□□□□ -0.87
CD47-204ENST00000471694 MASTLQ96GX5 879 aa9.59□□□□□ -0.87
CD47-204ENST00000471694 USP17L3A6NCW0 530 aa9.59□□□□□ -0.87
CD47-204ENST00000471694 USP17L4A6NCW7 530 aa9.59□□□□□ -0.87
CD47-204ENST00000471694 KBTBD13C9JR72 458 aa9.59□□□□□ -0.87
CD47-204ENST00000471694 POTEB2H3BUK9 544 aa9.59□□□□□ -0.87
CD47-204ENST00000471694 ATP2C2O75185 946 aa9.59□□□□□ -0.87
CD47-204ENST00000471694 LIG4P49917 911 aa9.59□□□□□ -0.87
CD47-204ENST00000471694 KRT33BQ14525 404 aa9.59□□□□□ -0.87
CD47-204ENST00000471694 PIK3AP1Q6ZUJ8 805 aa9.59□□□□□ -0.87
CD47-204ENST00000471694 USP17L1Q7RTZ2 530 aa9.59□□□□□ -0.87
CD47-204ENST00000471694 RNF216Q9NWF9 866 aaPredicted RBP9.59□□□□□ -0.87
CD47-204ENST00000471694 KCNG1Q9UIX4 513 aa9.59□□□□□ -0.87
CD47-204ENST00000471694 MOSPD1Q9UJG1 213 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms