RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 SH3BP5LQ7L8J4 393 aa8.58□□□□□ -1.04
HDAC1-204ENST00000471488 ZNF280CQ8ND82 737 aa8.58□□□□□ -1.04
HDAC1-204ENST00000471488 KAZALD1Q96I82 304 aa8.58□□□□□ -1.04
HDAC1-204ENST00000471488 TMOD4Q9NZQ9 345 aa8.58□□□□□ -1.04
HDAC1-204ENST00000471488 DOCK2Q92608 1830 aa8.58□□□□□ -1.04
HDAC1-204ENST00000471488 ENTPD3O75355 529 aa8.57□□□□□ -1.04
HDAC1-204ENST00000471488 ATP2B3Q16720 1220 aa8.57□□□□□ -1.04
HDAC1-204ENST00000471488 VGLL2Q8N8G2 317 aa8.57□□□□□ -1.04
HDAC1-204ENST00000471488 PROCA1Q8NCQ7 364 aaPredicted RBP8.57□□□□□ -1.04
HDAC1-204ENST00000471488 LPIN2Q92539 896 aa8.57□□□□□ -1.04
HDAC1-204ENST00000471488 SYMPKQ92797 1274 aaKnown RBP8.57□□□□□ -1.04
HDAC1-204ENST00000471488 TRIM34Q9BYJ4 488 aa8.57□□□□□ -1.04
HDAC1-204ENST00000471488 SEMA6BQ9H3T3 888 aa8.57□□□□□ -1.04
HDAC1-204ENST00000471488 PRKRIP1Q9H875 184 aaPredicted RBP8.57□□□□□ -1.04
HDAC1-204ENST00000471488 DDX4Q9NQI0 724 aaKnown RBP8.57□□□□□ -1.04
HDAC1-204ENST00000471488 GJD2Q9UKL4 321 aa8.57□□□□□ -1.04
HDAC1-204ENST00000471488 DOCK3Q8IZD9 2030 aa8.57□□□□□ -1.04
HDAC1-204ENST00000471488 DOCK1Q14185 1865 aa8.57□□□□□ -1.04
HDAC1-204ENST00000471488 USP17L5A8MUK1 530 aa8.56□□□□□ -1.04
HDAC1-204ENST00000471488 RGS2P41220 211 aa8.56□□□□□ -1.04
HDAC1-204ENST00000471488 PHKA1P46020 1223 aa8.56□□□□□ -1.04
HDAC1-204ENST00000471488 MTMR2Q13614 643 aa8.56□□□□□ -1.04
HDAC1-204ENST00000471488 SHHQ15465 462 aa8.56□□□□□ -1.04
HDAC1-204ENST00000471488 FAM109BQ6ICB4 259 aaPredicted RBP8.56□□□□□ -1.04
HDAC1-204ENST00000471488 SLF2Q8IX21 1173 aa8.56□□□□□ -1.04
HDAC1-204ENST00000471488 ANKRD44Q8N8A2 993 aa8.56□□□□□ -1.04
HDAC1-204ENST00000471488 GPRC5AQ8NFJ5 357 aa8.56□□□□□ -1.04
HDAC1-204ENST00000471488 SOCS4Q8WXH5 440 aa8.56□□□□□ -1.04
HDAC1-204ENST00000471488 AS3MTQ9HBK9 375 aa8.56□□□□□ -1.04
HDAC1-204ENST00000471488 CEP126Q9P2H0 1117 aa8.56□□□□□ -1.04
HDAC1-204ENST00000471488 DENND2AQ9ULE3 1009 aa8.56□□□□□ -1.04
HDAC1-204ENST00000471488 EYA2O00167 538 aa8.55□□□□□ -1.04
HDAC1-204ENST00000471488 FGFR2P21802 821 aa8.55□□□□□ -1.04
HDAC1-204ENST00000471488 RTP1P59025 263 aa8.55□□□□□ -1.04
HDAC1-204ENST00000471488 ZYXQ15942 572 aaKnown RBP8.55□□□□□ -1.04
HDAC1-204ENST00000471488 C9orf50Q5SZB4 431 aa8.55□□□□□ -1.04
HDAC1-204ENST00000471488 GJC2Q5T442 439 aaPredicted RBP8.55□□□□□ -1.04
HDAC1-204ENST00000471488 ANO1Q5XXA6 986 aa8.55□□□□□ -1.04
HDAC1-204ENST00000471488 ZGPATQ8N5A5 531 aaKnown RBP8.55□□□□□ -1.04
HDAC1-204ENST00000471488 P2RX7Q99572 595 aaKnown RBP8.55□□□□□ -1.04
HDAC1-204ENST00000471488 IDI2Q9BXS1 227 aa8.55□□□□□ -1.04
HDAC1-204ENST00000471488 EYSQ5T1H1 3165 aa8.55□□□□□ -1.04
HDAC1-204ENST00000471488 ATRNL1Q5VV63 1379 aa8.55□□□□□ -1.04
HDAC1-204ENST00000471488 VCANP13611 3396 aa8.55□□□□□ -1.04
HDAC1-204ENST00000471488 IL16Q14005 1332 aa8.54□□□□□ -1.04
HDAC1-204ENST00000471488 TNFRSF10AO00220 468 aa8.54□□□□□ -1.04
HDAC1-204ENST00000471488 GDF11O95390 407 aa8.54□□□□□ -1.04
HDAC1-204ENST00000471488 COL6A1P12109 1028 aa8.54□□□□□ -1.04
HDAC1-204ENST00000471488 ADORA1P30542 326 aa8.54□□□□□ -1.04
HDAC1-204ENST00000471488 MAPK4P31152 587 aa8.54□□□□□ -1.04
HDAC1-204ENST00000471488 HERVK_113P62684 666 aa8.54□□□□□ -1.04
HDAC1-204ENST00000471488 ATP2B2Q01814 1243 aa8.54□□□□□ -1.04
HDAC1-204ENST00000471488 CCDC27Q2M243 656 aa8.54□□□□□ -1.04
HDAC1-204ENST00000471488 RABL6Q3YEC7 729 aaPredicted RBP8.54□□□□□ -1.04
HDAC1-204ENST00000471488 MAP3K21Q5TCX8 1036 aa8.54□□□□□ -1.04
HDAC1-204ENST00000471488 MFSD14CQ5VZR4 134 aa8.54□□□□□ -1.04
HDAC1-204ENST00000471488 LHX8Q68G74 356 aa8.54□□□□□ -1.04
HDAC1-204ENST00000471488 GPR142Q7Z601 462 aa8.54□□□□□ -1.04
HDAC1-204ENST00000471488 PLEKHH3Q7Z736 793 aa8.54□□□□□ -1.04
HDAC1-204ENST00000471488 TRMT44Q8IYL2 757 aaKnown RBP8.54□□□□□ -1.04
HDAC1-204ENST00000471488 IL27Q8NEV9 243 aa8.54□□□□□ -1.04
HDAC1-204ENST00000471488 BADQ92934 168 aa8.54□□□□□ -1.04
HDAC1-204ENST00000471488 APBA2Q99767 749 aa8.54□□□□□ -1.04
HDAC1-204ENST00000471488 NOL10Q9BSC4 688 aaKnown RBP8.54□□□□□ -1.04
HDAC1-204ENST00000471488 OSBPL5Q9H0X9 879 aaPredicted RBP8.54□□□□□ -1.04
HDAC1-204ENST00000471488 PORCNQ9H237 461 aa8.54□□□□□ -1.04
HDAC1-204ENST00000471488 TXNRD2Q9NNW7 524 aa8.54□□□□□ -1.04
HDAC1-204ENST00000471488 RAI14Q9P0K7 980 aa8.54□□□□□ -1.04
HDAC1-204ENST00000471488 PTPRFP10586 1907 aa8.54□□□□□ -1.04
HDAC1-204ENST00000471488 MYH2Q9UKX2 1941 aa8.54□□□□□ -1.04
HDAC1-204ENST00000471488 LAMA2P24043 3122 aaKnown RBP8.53□□□□□ -1.04
HDAC1-204ENST00000471488 KBTBD13C9JR72 458 aa8.53□□□□□ -1.04
HDAC1-204ENST00000471488 ERVK-9P63128 1117 aa8.53□□□□□ -1.04
HDAC1-204ENST00000471488 ERVK-24P63145 666 aa8.53□□□□□ -1.04
HDAC1-204ENST00000471488 MECOMQ03112 1051 aa8.53□□□□□ -1.04
HDAC1-204ENST00000471488 CCDC184Q52MB2 194 aa8.53□□□□□ -1.04
HDAC1-204ENST00000471488 SPTY2D1Q68D10 685 aaPredicted RBP8.53□□□□□ -1.04
HDAC1-204ENST00000471488 ERICH6Q7L0X2 663 aa8.53□□□□□ -1.04
HDAC1-204ENST00000471488 CRACR2BQ8N4Y2 399 aaPredicted RBP8.53□□□□□ -1.04
HDAC1-204ENST00000471488 FERMT2Q96AC1 680 aa8.53□□□□□ -1.04
HDAC1-204ENST00000471488 FAM122AQ96E09 287 aa8.53□□□□□ -1.04
HDAC1-204ENST00000471488 EDC3Q96F86 508 aaKnown RBP8.53□□□□□ -1.04
HDAC1-204ENST00000471488 RNPC3Q96LT9 517 aaKnown RBP8.53□□□□□ -1.04
HDAC1-204ENST00000471488 FEZ1Q99689 392 aa8.53□□□□□ -1.04
HDAC1-204ENST00000471488 TTYH1Q9H313 450 aaPredicted RBP8.53□□□□□ -1.04
HDAC1-204ENST00000471488 IVNS1ABPQ9Y6Y0 642 aa8.53□□□□□ -1.04
HDAC1-204ENST00000471488 MROH7-TTC4A0A0A0MT08 1334 aa8.53□□□□□ -1.04
HDAC1-204ENST00000471488 KIF16BQ96L93 1317 aa8.53□□□□□ -1.04
HDAC1-204ENST00000471488 PHIPQ8WWQ0 1821 aa8.52□□□□□ -1.04
HDAC1-204ENST00000471488 GLRX3O76003 335 aaKnown RBP8.52□□□□□ -1.05
HDAC1-204ENST00000471488 XRCC5P13010 732 aaKnown RBP8.52□□□□□ -1.05
HDAC1-204ENST00000471488 CYP2C19P33261 490 aa8.52□□□□□ -1.05
HDAC1-204ENST00000471488 CAP2P40123 477 aa8.52□□□□□ -1.05
HDAC1-204ENST00000471488 TIMM10P62072 90 aa8.52□□□□□ -1.05
HDAC1-204ENST00000471488 RASGRF1Q13972 1273 aa8.52□□□□□ -1.05
HDAC1-204ENST00000471488 CCDC85BQ15834 202 aaPredicted RBP8.52□□□□□ -1.05
HDAC1-204ENST00000471488 Q3C1V9 767 aa8.52□□□□□ -1.05
HDAC1-204ENST00000471488 TRIM60Q495X7 471 aa8.52□□□□□ -1.05
HDAC1-204ENST00000471488 TJAP1Q5JTD0 557 aa8.52□□□□□ -1.05
HDAC1-204ENST00000471488 GORABQ5T7V8 394 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms