RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 GFRA2O00451 464 aa5.84□□□□□ -1.47
COPS3-206ENST00000471414 CDK8P49336 464 aa5.84□□□□□ -1.47
COPS3-206ENST00000471414 LIG3P49916 1009 aa5.84□□□□□ -1.47
COPS3-206ENST00000471414 CCDC85BQ15834 202 aaPredicted RBP5.84□□□□□ -1.47
COPS3-206ENST00000471414 SPRED2Q7Z698 418 aa5.84□□□□□ -1.47
COPS3-206ENST00000471414 STK11IPQ8N1F8 1099 aa5.84□□□□□ -1.47
COPS3-206ENST00000471414 TOP6BLQ8N6T0 577 aa5.84□□□□□ -1.47
COPS3-206ENST00000471414 NETO1Q8TDF5 533 aa5.84□□□□□ -1.47
COPS3-206ENST00000471414 PLPPR2Q96GM1 343 aa5.84□□□□□ -1.47
COPS3-206ENST00000471414 NOC4LQ9BVI4 516 aaKnown RBP5.84□□□□□ -1.47
COPS3-206ENST00000471414 FBRSQ9HAH7 460 aa5.84□□□□□ -1.47
COPS3-206ENST00000471414 USP31Q70CQ4 1352 aa5.83□□□□□ -1.48
COPS3-206ENST00000471414 EOMESO95936 686 aa5.83□□□□□ -1.48
COPS3-206ENST00000471414 CEACAM5P06731 702 aa5.83□□□□□ -1.48
COPS3-206ENST00000471414 ITGB5P18084 799 aa5.83□□□□□ -1.48
COPS3-206ENST00000471414 ERCC3P19447 782 aa5.83□□□□□ -1.48
COPS3-206ENST00000471414 SLBPQ14493 270 aaKnown RBP eCLIP5.83□□□□□ -1.48
COPS3-206ENST00000471414 IFI16Q16666 785 aaKnown RBP5.83□□□□□ -1.48
COPS3-206ENST00000471414 KRTAP19-1Q8IUB9 90 aa5.83□□□□□ -1.48
COPS3-206ENST00000471414 KCT2Q8NC54 265 aa5.83□□□□□ -1.48
COPS3-206ENST00000471414 AGBL5Q8NDL9 886 aa5.83□□□□□ -1.48
COPS3-206ENST00000471414 FLCNQ8NFG4 579 aa5.83□□□□□ -1.48
COPS3-206ENST00000471414 WNT10AQ9GZT5 417 aa5.83□□□□□ -1.48
COPS3-206ENST00000471414 PRDM10Q9NQV6 1147 aa5.83□□□□□ -1.48
COPS3-206ENST00000471414 PCDHB5Q9Y5E4 795 aa5.83□□□□□ -1.48
COPS3-206ENST00000471414 TACC3Q9Y6A5 838 aa5.83□□□□□ -1.48
COPS3-206ENST00000471414 LRIG2O94898 1065 aa5.82□□□□□ -1.48
COPS3-206ENST00000471414 TFE3P19532 575 aaPredicted RBP5.82□□□□□ -1.48
COPS3-206ENST00000471414 TAGLNQ01995 201 aaKnown RBP5.82□□□□□ -1.48
COPS3-206ENST00000471414 PRKCQQ04759 706 aa5.82□□□□□ -1.48
COPS3-206ENST00000471414 TAF1CQ15572 869 aaPredicted RBP5.82□□□□□ -1.48
COPS3-206ENST00000471414 ZNF574Q6ZN55 896 aaPredicted RBP5.82□□□□□ -1.48
COPS3-206ENST00000471414 C22orf34Q6ZV56 151 aa5.82□□□□□ -1.48
COPS3-206ENST00000471414 ARMCX6Q7L4S7 300 aa5.82□□□□□ -1.48
COPS3-206ENST00000471414 HDXQ7Z353 690 aa5.82□□□□□ -1.48
COPS3-206ENST00000471414 ZNF507Q8TCN5 953 aa5.82□□□□□ -1.48
COPS3-206ENST00000471414 ELMO3Q96BJ8 720 aa5.82□□□□□ -1.48
COPS3-206ENST00000471414 VAV3Q9UKW4 847 aa5.82□□□□□ -1.48
COPS3-206ENST00000471414 SLC5A6Q9Y289 635 aa5.82□□□□□ -1.48
COPS3-206ENST00000471414 SLITRK5O94991 958 aa5.81□□□□□ -1.48
COPS3-206ENST00000471414 PSMD2Q13200 908 aa5.81□□□□□ -1.48
COPS3-206ENST00000471414 SEPT6Q14141 434 aa5.81□□□□□ -1.48
COPS3-206ENST00000471414 NKG7Q16617 165 aa5.81□□□□□ -1.48
COPS3-206ENST00000471414 WIPI1Q5MNZ9 446 aaPredicted RBP5.81□□□□□ -1.48
COPS3-206ENST00000471414 SPACA3Q8IXA5 215 aa5.81□□□□□ -1.48
COPS3-206ENST00000471414 CRELD1Q96HD1 420 aa5.81□□□□□ -1.48
COPS3-206ENST00000471414 FAM161BQ96MY7 647 aa5.81□□□□□ -1.48
COPS3-206ENST00000471414 SSU72Q9NP77 194 aaKnown RBP5.81□□□□□ -1.48
COPS3-206ENST00000471414 PRAMEF27A3QJZ7 478 aa5.8□□□□□ -1.48
COPS3-206ENST00000471414 RLBP1P12271 317 aa5.8□□□□□ -1.48
COPS3-206ENST00000471414 FUT4P22083 530 aa5.8□□□□□ -1.48
COPS3-206ENST00000471414 CCDC27Q2M243 656 aa5.8□□□□□ -1.48
COPS3-206ENST00000471414 TP53INP2Q8IXH6 220 aa5.8□□□□□ -1.48
COPS3-206ENST00000471414 PHC3Q8NDX5 983 aa5.8□□□□□ -1.48
COPS3-206ENST00000471414 GTF2IRD1Q9UHL9 959 aa5.8□□□□□ -1.48
COPS3-206ENST00000471414 MAPK8IP1Q9UQF2 711 aa5.8□□□□□ -1.48
COPS3-206ENST00000471414 SNX11Q9Y5W9 270 aa5.8□□□□□ -1.48
COPS3-206ENST00000471414 TMEM265A0A087WTH1 108 aa5.79□□□□□ -1.48
COPS3-206ENST00000471414 PAX4O43316 350 aa5.79□□□□□ -1.48
COPS3-206ENST00000471414 CD8BP10966 210 aa5.79□□□□□ -1.48
COPS3-206ENST00000471414 BNIP3Q12983 259 aa5.79□□□□□ -1.48
COPS3-206ENST00000471414 NKPD1Q17RQ9 610 aa5.79□□□□□ -1.48
COPS3-206ENST00000471414 CDC37L1Q7L3B6 337 aa5.79□□□□□ -1.48
COPS3-206ENST00000471414 CCDC84Q86UT8 332 aaPredicted RBP5.79□□□□□ -1.48
COPS3-206ENST00000471414 FOXQ1Q9C009 403 aa5.79□□□□□ -1.48
COPS3-206ENST00000471414 GZF1Q9H116 711 aaPredicted RBP5.79□□□□□ -1.48
COPS3-206ENST00000471414 TLR6Q9Y2C9 796 aa5.79□□□□□ -1.48
COPS3-206ENST00000471414 CNTNAP4Q9C0A0 1308 aa5.78□□□□□ -1.48
COPS3-206ENST00000471414 CST3P01034 146 aaPredicted RBP5.78□□□□□ -1.48
COPS3-206ENST00000471414 ZNF865P0CJ78 1059 aaPredicted RBP5.78□□□□□ -1.48
COPS3-206ENST00000471414 GRK4P32298 578 aa5.78□□□□□ -1.48
COPS3-206ENST00000471414 TSNAXIP1Q2TAA8 658 aa5.78□□□□□ -1.48
COPS3-206ENST00000471414 HID1Q8IV36 788 aa5.78□□□□□ -1.48
COPS3-206ENST00000471414 MRPL41Q8IXM3 137 aaKnown RBP5.78□□□□□ -1.48
COPS3-206ENST00000471414 MFSD2AQ8NA29 543 aa5.78□□□□□ -1.48
COPS3-206ENST00000471414 HRASLS5Q96KN8 279 aa5.78□□□□□ -1.48
COPS3-206ENST00000471414 RHOVQ96L33 236 aa5.78□□□□□ -1.48
COPS3-206ENST00000471414 MIR1-1HGQ9H1L0 117 aa5.78□□□□□ -1.48
COPS3-206ENST00000471414 PICK1Q9NRD5 415 aa5.78□□□□□ -1.48
COPS3-206ENST00000471414 ADAMTS6Q9UKP5 1117 aa5.78□□□□□ -1.48
COPS3-206ENST00000471414 FAM221AA4D161 298 aa5.77□□□□□ -1.49
COPS3-206ENST00000471414 SORBS3O60504 671 aa5.77□□□□□ -1.49
COPS3-206ENST00000471414 PAPLNO95428 1278 aa5.77□□□□□ -1.49
COPS3-206ENST00000471414 CD96P40200 585 aa5.77□□□□□ -1.49
COPS3-206ENST00000471414 XPCQ01831 940 aaPredicted RBP5.77□□□□□ -1.49
COPS3-206ENST00000471414 RPL6Q02878 288 aaKnown RBP5.77□□□□□ -1.49
COPS3-206ENST00000471414 MAP3K11Q16584 847 aa5.77□□□□□ -1.49
COPS3-206ENST00000471414 AOC3Q16853 763 aa5.77□□□□□ -1.49
COPS3-206ENST00000471414 ZNF792Q3KQV3 632 aa5.77□□□□□ -1.49
COPS3-206ENST00000471414 PRDM5Q9NQX1 630 aaPredicted RBP5.77□□□□□ -1.49
COPS3-206ENST00000471414 MBNL3Q9NUK0 354 aaKnown RBP5.77□□□□□ -1.49
COPS3-206ENST00000471414 PITPNM2Q9BZ72 1349 aa5.76□□□□□ -1.49
COPS3-206ENST00000471414 CILPO75339 1184 aa5.76□□□□□ -1.49
COPS3-206ENST00000471414 RNASE1P07998 156 aaKnown RBP5.76□□□□□ -1.49
COPS3-206ENST00000471414 JUNBP17275 347 aaPredicted RBP5.76□□□□□ -1.49
COPS3-206ENST00000471414 ITIH2P19823 946 aa5.76□□□□□ -1.49
COPS3-206ENST00000471414 CLCN7P51798 805 aa5.76□□□□□ -1.49
COPS3-206ENST00000471414 ETF1P62495 437 aaKnown RBP5.76□□□□□ -1.49
COPS3-206ENST00000471414 LMNB2Q03252 620 aa5.76□□□□□ -1.49
COPS3-206ENST00000471414 PRAMEF13Q5VWM6 474 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms