RNA–Protein interactions for RNA: ENST00000471226.5

ABCF3-208, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-208ENST00000471226 MBD4O95243 580 aa18.31■□□□□ 0.52
ABCF3-208ENST00000471226 ZFYP08048 801 aaPredicted RBP18.31■□□□□ 0.52
ABCF3-208ENST00000471226 CTCFP49711 727 aaPredicted RBP18.31■□□□□ 0.52
ABCF3-208ENST00000471226 INHBEP58166 350 aa18.31■□□□□ 0.52
ABCF3-208ENST00000471226 SREBF2Q12772 1141 aa18.31■□□□□ 0.52
ABCF3-208ENST00000471226 FOXP4Q8IVH2 680 aaPredicted RBP18.31■□□□□ 0.52
ABCF3-208ENST00000471226 PLEKHM2Q8IWE5 1019 aa18.31■□□□□ 0.52
ABCF3-208ENST00000471226 PUS7LQ9H0K6 701 aaKnown RBP18.31■□□□□ 0.52
ABCF3-208ENST00000471226 OSBPL3Q9H4L5 887 aa18.31■□□□□ 0.52
ABCF3-208ENST00000471226 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.31■□□□□ 0.52
ABCF3-208ENST00000471226 PTPRFP10586 1907 aa18.3■□□□□ 0.52
ABCF3-208ENST00000471226 TESPA1A2RU30 521 aaPredicted RBP18.3■□□□□ 0.52
ABCF3-208ENST00000471226 HSPA8P11142 646 aaKnown RBP18.3■□□□□ 0.52
ABCF3-208ENST00000471226 MS4A4AQ96JQ5 239 aa18.3■□□□□ 0.52
ABCF3-208ENST00000471226 RNF186Q9NXI6 227 aa18.3■□□□□ 0.52
ABCF3-208ENST00000471226 SAGE1Q9NXZ1 904 aa18.3■□□□□ 0.52
ABCF3-208ENST00000471226 SAP30BPQ9UHR5 308 aaKnown RBP18.3■□□□□ 0.52
ABCF3-208ENST00000471226 FAM196BA6NMK8 535 aa18.29■□□□□ 0.52
ABCF3-208ENST00000471226 CTNND1O60716 968 aaKnown RBP18.29■□□□□ 0.52
ABCF3-208ENST00000471226 PPATQ06203 517 aa18.29■□□□□ 0.52
ABCF3-208ENST00000471226 PPIL2Q13356 520 aa18.29■□□□□ 0.52
ABCF3-208ENST00000471226 LRRFIP1Q32MZ4 808 aaKnown RBP18.29■□□□□ 0.52
ABCF3-208ENST00000471226 SCYL3Q8IZE3 742 aa18.29■□□□□ 0.52
ABCF3-208ENST00000471226 SDR42E1Q8WUS8 393 aa18.29■□□□□ 0.52
ABCF3-208ENST00000471226 APPBP2Q92624 585 aa18.29■□□□□ 0.52
ABCF3-208ENST00000471226 OTUD5Q96G74 571 aa18.29■□□□□ 0.52
ABCF3-208ENST00000471226 DCP1AQ9NPI6 582 aaPredicted RBP18.29■□□□□ 0.52
ABCF3-208ENST00000471226 CASP8AP2Q9UKL3 1982 aa18.28■□□□□ 0.52
ABCF3-208ENST00000471226 MYH8P13535 1937 aa18.28■□□□□ 0.52
ABCF3-208ENST00000471226 PRKAB2O43741 272 aa18.28■□□□□ 0.52
ABCF3-208ENST00000471226 HLA-DOAP06340 250 aa18.28■□□□□ 0.52
ABCF3-208ENST00000471226 RRP1BQ14684 758 aaKnown RBP18.28■□□□□ 0.52
ABCF3-208ENST00000471226 OSBP2Q969R2 916 aa18.28■□□□□ 0.52
ABCF3-208ENST00000471226 EVI5LQ96CN4 794 aa18.28■□□□□ 0.52
ABCF3-208ENST00000471226 FSD1Q9BTV5 496 aa18.28■□□□□ 0.52
ABCF3-208ENST00000471226 DNAJC18Q9H819 358 aa18.28■□□□□ 0.52
ABCF3-208ENST00000471226 ATP8A2Q9NTI2 1148 aa18.28■□□□□ 0.52
ABCF3-208ENST00000471226 IRF6O14896 467 aa18.27■□□□□ 0.52
ABCF3-208ENST00000471226 TRPA1O75762 1119 aa18.27■□□□□ 0.52
ABCF3-208ENST00000471226 GTF2A2P52657 109 aa18.27■□□□□ 0.52
ABCF3-208ENST00000471226 TTC6Q86TZ1 520 aa18.27■□□□□ 0.52
ABCF3-208ENST00000471226 STRBPQ96SI9 672 aaKnown RBP18.27■□□□□ 0.52
ABCF3-208ENST00000471226 EHD4Q9H223 541 aa18.27■□□□□ 0.52
ABCF3-208ENST00000471226 PTPRAP18433 802 aa18.26■□□□□ 0.51
ABCF3-208ENST00000471226 PDE4AP27815 886 aa18.26■□□□□ 0.51
ABCF3-208ENST00000471226 CAP2P40123 477 aa18.26■□□□□ 0.51
ABCF3-208ENST00000471226 PLCD1P51178 756 aa18.26■□□□□ 0.51
ABCF3-208ENST00000471226 LBX1P52954 281 aa18.26■□□□□ 0.51
ABCF3-208ENST00000471226 SLC4A8Q2Y0W8 1093 aa18.26■□□□□ 0.51
ABCF3-208ENST00000471226 ZMYM1Q5SVZ6 1142 aa18.26■□□□□ 0.51
ABCF3-208ENST00000471226 TICAM2Q86XR7 235 aa18.26■□□□□ 0.51
ABCF3-208ENST00000471226 IFNL1Q8IU54 200 aa18.26■□□□□ 0.51
ABCF3-208ENST00000471226 CRACR2BQ8N4Y2 399 aaPredicted RBP18.26■□□□□ 0.51
ABCF3-208ENST00000471226 PTPN18Q99952 460 aa18.26■□□□□ 0.51
ABCF3-208ENST00000471226 PRDM10Q9NQV6 1147 aa18.26■□□□□ 0.51
ABCF3-208ENST00000471226 TSKSQ9UJT2 592 aa18.26■□□□□ 0.51
ABCF3-208ENST00000471226 KCNH4Q9UQ05 1017 aa18.26■□□□□ 0.51
ABCF3-208ENST00000471226 IGF2BP3O00425 579 aaKnown RBP eCLIP18.25■□□□□ 0.51
ABCF3-208ENST00000471226 BRI3BPQ8WY22 251 aa18.25■□□□□ 0.51
ABCF3-208ENST00000471226 CFHR5Q9BXR6 569 aa18.25■□□□□ 0.51
ABCF3-208ENST00000471226 PICK1Q9NRD5 415 aa18.25■□□□□ 0.51
ABCF3-208ENST00000471226 MCM9Q9NXL9 1143 aa18.25■□□□□ 0.51
ABCF3-208ENST00000471226 SERPINB13Q9UIV8 391 aa18.25■□□□□ 0.51
ABCF3-208ENST00000471226 SLC4A4Q9Y6R1 1079 aa18.25■□□□□ 0.51
ABCF3-208ENST00000471226 CCL15-CCL14A0A0B4J2E2 113 aa18.24■□□□□ 0.51
ABCF3-208ENST00000471226 M0R2C6 588 aa18.24■□□□□ 0.51
ABCF3-208ENST00000471226 GPAA1O43292 621 aa18.24■□□□□ 0.51
ABCF3-208ENST00000471226 ALDH1A1P00352 501 aa18.24■□□□□ 0.51
ABCF3-208ENST00000471226 POLR3DP05423 398 aaPredicted RBP18.24■□□□□ 0.51
ABCF3-208ENST00000471226 GABPAQ06546 454 aa18.24■□□□□ 0.51
ABCF3-208ENST00000471226 SNAPC2Q13487 334 aa18.24■□□□□ 0.51
ABCF3-208ENST00000471226 CCL15Q16663 113 aa18.24■□□□□ 0.51
ABCF3-208ENST00000471226 TATDN1Q6P1N9 297 aa18.24■□□□□ 0.51
ABCF3-208ENST00000471226 SEC62Q99442 399 aaKnown RBP18.24■□□□□ 0.51
ABCF3-208ENST00000471226 TRIM34Q9BYJ4 488 aa18.24■□□□□ 0.51
ABCF3-208ENST00000471226 ZHX2Q9Y6X8 837 aa18.24■□□□□ 0.51
ABCF3-208ENST00000471226 GSG1L2A8MUP6 293 aa18.23■□□□□ 0.51
ABCF3-208ENST00000471226 CXCL11O14625 94 aa18.23■□□□□ 0.51
ABCF3-208ENST00000471226 CETPP11597 493 aa18.23■□□□□ 0.51
ABCF3-208ENST00000471226 GINM1Q9NU53 330 aa18.23■□□□□ 0.51
ABCF3-208ENST00000471226 AFG3L2Q9Y4W6 797 aa18.23■□□□□ 0.51
ABCF3-208ENST00000471226 TRIM6-TRIM34B2RNG4 842 aa18.22■□□□□ 0.51
ABCF3-208ENST00000471226 GNAT2P19087 354 aa18.22■□□□□ 0.51
ABCF3-208ENST00000471226 JAG1P78504 1218 aa18.22■□□□□ 0.51
ABCF3-208ENST00000471226 EVX2Q03828 476 aa18.22■□□□□ 0.51
ABCF3-208ENST00000471226 C12orf60Q5U649 245 aa18.22■□□□□ 0.51
ABCF3-208ENST00000471226 OTUD7BQ6GQQ9 843 aa18.22■□□□□ 0.51
ABCF3-208ENST00000471226 GIMAP6Q6P9H5 292 aa18.22■□□□□ 0.51
ABCF3-208ENST00000471226 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.22■□□□□ 0.51
ABCF3-208ENST00000471226 TAOK2Q9UL54 1235 aa18.22■□□□□ 0.51
ABCF3-208ENST00000471226 USP17L12C9JPN9 530 aa18.21■□□□□ 0.51
ABCF3-208ENST00000471226 USP17L21D6R901 530 aa18.21■□□□□ 0.51
ABCF3-208ENST00000471226 TBC1D8O95759 1140 aa18.21■□□□□ 0.51
ABCF3-208ENST00000471226 ASNSP08243 561 aa18.21■□□□□ 0.51
ABCF3-208ENST00000471226 CYP2D6P10635 497 aa18.21■□□□□ 0.51
ABCF3-208ENST00000471226 SHMT1P34896 483 aa18.21■□□□□ 0.51
ABCF3-208ENST00000471226 MOGSQ13724 837 aa18.21■□□□□ 0.51
ABCF3-208ENST00000471226 CCDC84Q86UT8 332 aaPredicted RBP18.21■□□□□ 0.51
ABCF3-208ENST00000471226 DDRGK1Q96HY6 314 aa18.21■□□□□ 0.51
ABCF3-208ENST00000471226 TBC1D2Q9BYX2 928 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms