RNA–Protein interactions for RNA: ENST00000471039.1

SCNM1-205, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-205ENST00000471039 HLA-DOAP06340 250 aa14.92□□□□□ -0.02
SCNM1-205ENST00000471039 GJA5P36382 358 aa14.92□□□□□ -0.02
SCNM1-205ENST00000471039 MAP3K9P80192 1104 aa14.92□□□□□ -0.02
SCNM1-205ENST00000471039 NOL9Q5SY16 702 aaKnown RBP14.92□□□□□ -0.02
SCNM1-205ENST00000471039 TTC22Q5TAA0 569 aa14.92□□□□□ -0.02
SCNM1-205ENST00000471039 ZKSCAN4Q969J2 545 aaPredicted RBP14.92□□□□□ -0.02
SCNM1-205ENST00000471039 RILPL2Q969X0 211 aa14.92□□□□□ -0.02
SCNM1-205ENST00000471039 ZIC5Q96T25 663 aa14.92□□□□□ -0.02
SCNM1-205ENST00000471039 SEC62Q99442 399 aaKnown RBP14.92□□□□□ -0.02
SCNM1-205ENST00000471039 DCP1AQ9NPI6 582 aaPredicted RBP14.92□□□□□ -0.02
SCNM1-205ENST00000471039 HERC5Q9UII4 1024 aaKnown RBP14.92□□□□□ -0.02
SCNM1-205ENST00000471039 PHF20L1A8MW92 1017 aa14.91□□□□□ -0.02
SCNM1-205ENST00000471039 TBC1D12O60347 775 aa14.91□□□□□ -0.02
SCNM1-205ENST00000471039 ZBTB48P10074 688 aaPredicted RBP14.91□□□□□ -0.02
SCNM1-205ENST00000471039 MAP2K2P36507 400 aa14.91□□□□□ -0.02
SCNM1-205ENST00000471039 MKRN3Q13064 507 aaKnown RBP14.91□□□□□ -0.02
SCNM1-205ENST00000471039 SPRYD7Q5W111 196 aa14.91□□□□□ -0.02
SCNM1-205ENST00000471039 METTL16Q86W50 562 aaKnown RBP14.91□□□□□ -0.02
SCNM1-205ENST00000471039 OPTNQ96CV9 577 aa14.91□□□□□ -0.02
SCNM1-205ENST00000471039 STRBPQ96SI9 672 aaKnown RBP14.91□□□□□ -0.02
SCNM1-205ENST00000471039 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.91□□□□□ -0.02
SCNM1-205ENST00000471039 ATP8A2Q9NTI2 1148 aa14.91□□□□□ -0.02
SCNM1-205ENST00000471039 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.91□□□□□ -0.02
SCNM1-205ENST00000471039 PI4KBQ9UBF8 816 aa14.91□□□□□ -0.02
SCNM1-205ENST00000471039 A0A0D9SFI3 127 aa14.9□□□□□ -0.02
SCNM1-205ENST00000471039 SPDYE5A6NIY4 337 aa14.9□□□□□ -0.02
SCNM1-205ENST00000471039 ERICH6BQ5W0A0 696 aa14.9□□□□□ -0.02
SCNM1-205ENST00000471039 TICAM2Q86XR7 235 aa14.9□□□□□ -0.02
SCNM1-205ENST00000471039 SCYL3Q8IZE3 742 aa14.9□□□□□ -0.02
SCNM1-205ENST00000471039 CNKSR2Q8WXI2 1034 aa14.9□□□□□ -0.02
SCNM1-205ENST00000471039 SLC10A4Q96EP9 437 aa14.9□□□□□ -0.02
SCNM1-205ENST00000471039 EHD4Q9H223 541 aa14.9□□□□□ -0.02
SCNM1-205ENST00000471039 EPB41L4AQ9HCS5 686 aaPredicted RBP14.9□□□□□ -0.02
SCNM1-205ENST00000471039 MCM9Q9NXL9 1143 aa14.9□□□□□ -0.02
SCNM1-205ENST00000471039 SLC4A4Q9Y6R1 1079 aa14.9□□□□□ -0.02
SCNM1-205ENST00000471039 KIF23Q02241 960 aaPredicted RBP14.89□□□□□ -0.03
SCNM1-205ENST00000471039 EVX2Q03828 476 aa14.89□□□□□ -0.03
SCNM1-205ENST00000471039 SKAP1Q86WV1 359 aa14.89□□□□□ -0.03
SCNM1-205ENST00000471039 CRACR2BQ8N4Y2 399 aaPredicted RBP14.89□□□□□ -0.03
SCNM1-205ENST00000471039 OTUD5Q96G74 571 aa14.89□□□□□ -0.03
SCNM1-205ENST00000471039 FAM227BQ96M60 508 aa14.89□□□□□ -0.03
SCNM1-205ENST00000471039 MYH4Q9Y623 1939 aa14.89□□□□□ -0.03
SCNM1-205ENST00000471039 ROBO3Q96MS0 1386 aa14.88□□□□□ -0.03
SCNM1-205ENST00000471039 POLR3DP05423 398 aaPredicted RBP14.88□□□□□ -0.03
SCNM1-205ENST00000471039 HSPA1AP0DMV8 641 aaKnown RBP14.88□□□□□ -0.03
SCNM1-205ENST00000471039 HSPA1BP0DMV9 641 aaKnown RBP14.88□□□□□ -0.03
SCNM1-205ENST00000471039 CYP2D6P10635 497 aa14.88□□□□□ -0.03
SCNM1-205ENST00000471039 GNAT2P19087 354 aa14.88□□□□□ -0.03
SCNM1-205ENST00000471039 PLCD1P51178 756 aa14.88□□□□□ -0.03
SCNM1-205ENST00000471039 NMIQ13287 307 aaPredicted RBP14.88□□□□□ -0.03
SCNM1-205ENST00000471039 CCDC129Q6ZRS4 1044 aa14.88□□□□□ -0.03
SCNM1-205ENST00000471039 TTC6Q86TZ1 520 aa14.88□□□□□ -0.03
SCNM1-205ENST00000471039 ERO1BQ86YB8 467 aa14.88□□□□□ -0.03
SCNM1-205ENST00000471039 TRIM34Q9BYJ4 488 aa14.88□□□□□ -0.03
SCNM1-205ENST00000471039 ARPP21Q9UBL0 812 aaPredicted RBP14.88□□□□□ -0.03
SCNM1-205ENST00000471039 SERPINB13Q9UIV8 391 aa14.88□□□□□ -0.03
SCNM1-205ENST00000471039 GSG1L2A8MUP6 293 aa14.87□□□□□ -0.03
SCNM1-205ENST00000471039 FOXP2O15409 715 aa14.87□□□□□ -0.03
SCNM1-205ENST00000471039 CTNND1O60716 968 aaKnown RBP14.87□□□□□ -0.03
SCNM1-205ENST00000471039 SDSP20132 328 aa14.87□□□□□ -0.03
SCNM1-205ENST00000471039 MAP2K1Q02750 393 aaPredicted RBP14.87□□□□□ -0.03
SCNM1-205ENST00000471039 GABPAQ06546 454 aa14.87□□□□□ -0.03
SCNM1-205ENST00000471039 PPIL2Q13356 520 aa14.87□□□□□ -0.03
SCNM1-205ENST00000471039 RRP1BQ14684 758 aaKnown RBP14.87□□□□□ -0.03
SCNM1-205ENST00000471039 DDRGK1Q96HY6 314 aa14.87□□□□□ -0.03
SCNM1-205ENST00000471039 HELLSQ9NRZ9 838 aa14.87□□□□□ -0.03
SCNM1-205ENST00000471039 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.87□□□□□ -0.03
SCNM1-205ENST00000471039 CYP2D7A0A087X1C5 515 aa14.86□□□□□ -0.03
SCNM1-205ENST00000471039 MANSC4A6NHS7 340 aaPredicted RBP14.86□□□□□ -0.03
SCNM1-205ENST00000471039 SREBF2Q12772 1141 aa14.86□□□□□ -0.03
SCNM1-205ENST00000471039 GIMAP6Q6P9H5 292 aa14.86□□□□□ -0.03
SCNM1-205ENST00000471039 ZNF589Q86UQ0 364 aaPredicted RBP14.86□□□□□ -0.03
SCNM1-205ENST00000471039 FOXP4Q8IVH2 680 aaPredicted RBP14.86□□□□□ -0.03
SCNM1-205ENST00000471039 WBP1LQ9NX94 342 aa14.86□□□□□ -0.03
SCNM1-205ENST00000471039 PPP4R2Q9NY27 417 aa14.86□□□□□ -0.03
SCNM1-205ENST00000471039 PARP14Q460N5 1801 aa14.86□□□□□ -0.03
SCNM1-205ENST00000471039 CCDC171Q6TFL3 1326 aa14.86□□□□□ -0.03
SCNM1-205ENST00000471039 USP17L12C9JPN9 530 aa14.85□□□□□ -0.03
SCNM1-205ENST00000471039 USP17L21D6R901 530 aa14.85□□□□□ -0.03
SCNM1-205ENST00000471039 SMIM22K7EJ46 135 aa14.85□□□□□ -0.03
SCNM1-205ENST00000471039 HIP1O00291 1037 aa14.85□□□□□ -0.03
SCNM1-205ENST00000471039 IRF6O14896 467 aa14.85□□□□□ -0.03
SCNM1-205ENST00000471039 GDF11O95390 407 aa14.85□□□□□ -0.03
SCNM1-205ENST00000471039 PTPRAP18433 802 aa14.85□□□□□ -0.03
SCNM1-205ENST00000471039 SHMT1P34896 483 aa14.85□□□□□ -0.03
SCNM1-205ENST00000471039 CAP2P40123 477 aa14.85□□□□□ -0.03
SCNM1-205ENST00000471039 TDO2P48775 406 aa14.85□□□□□ -0.03
SCNM1-205ENST00000471039 PPATQ06203 517 aa14.85□□□□□ -0.03
SCNM1-205ENST00000471039 SHROOM1Q2M3G4 852 aaPredicted RBP14.85□□□□□ -0.03
SCNM1-205ENST00000471039 MCMDC2Q4G0Z9 681 aa14.85□□□□□ -0.03
SCNM1-205ENST00000471039 C12orf60Q5U649 245 aa14.85□□□□□ -0.03
SCNM1-205ENST00000471039 TATDN1Q6P1N9 297 aa14.85□□□□□ -0.03
SCNM1-205ENST00000471039 CTR9Q6PD62 1173 aa14.85□□□□□ -0.03
SCNM1-205ENST00000471039 AMOTL1Q8IY63 956 aa14.85□□□□□ -0.03
SCNM1-205ENST00000471039 REM2Q8IYK8 340 aaPredicted RBP14.85□□□□□ -0.03
SCNM1-205ENST00000471039 SLC44A5Q8NCS7 719 aa14.85□□□□□ -0.03
SCNM1-205ENST00000471039 PICK1Q9NRD5 415 aa14.85□□□□□ -0.03
SCNM1-205ENST00000471039 DIAPH3Q9NSV4 1193 aa14.85□□□□□ -0.03
SCNM1-205ENST00000471039 SBK1Q52WX2 424 aa14.84□□□□□ -0.03
SCNM1-205ENST00000471039 VPS53Q5VIR6 699 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms