RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 NPHP4O75161 1426 aaPredicted RBP11.86□□□□□ -0.51
RRP1B-202ENST00000470886 MBD4O95243 580 aa11.86□□□□□ -0.51
RRP1B-202ENST00000470886 STX17P56962 302 aa11.86□□□□□ -0.51
RRP1B-202ENST00000470886 WHAMMP3Q1A5X7 153 aa11.86□□□□□ -0.51
RRP1B-202ENST00000470886 BICDL1Q6ZP65 573 aa11.86□□□□□ -0.51
RRP1B-202ENST00000470886 CRACR2BQ8N4Y2 399 aaPredicted RBP11.86□□□□□ -0.51
RRP1B-202ENST00000470886 CCDC155Q8N6L0 562 aa11.86□□□□□ -0.51
RRP1B-202ENST00000470886 TMOD2Q9NZR1 351 aa11.86□□□□□ -0.51
RRP1B-202ENST00000470886 RASAL2Q9UJF2 1139 aa11.86□□□□□ -0.51
RRP1B-202ENST00000470886 PLEKHG2Q9H7P9 1386 aa11.86□□□□□ -0.51
RRP1B-202ENST00000470886 VGLL3A8MV65 326 aa11.86□□□□□ -0.51
RRP1B-202ENST00000470886 B4E1Z4 1266 aa11.86□□□□□ -0.51
RRP1B-202ENST00000470886 WDHD1O75717 1129 aaPredicted RBP11.86□□□□□ -0.51
RRP1B-202ENST00000470886 PFKFB1P16118 471 aa11.86□□□□□ -0.51
RRP1B-202ENST00000470886 PLCG2P16885 1265 aa11.86□□□□□ -0.51
RRP1B-202ENST00000470886 PARP10Q53GL7 1025 aa11.86□□□□□ -0.51
RRP1B-202ENST00000470886 UNC5CLQ8IV45 518 aa11.86□□□□□ -0.51
RRP1B-202ENST00000470886 POLR3EQ9NVU0 708 aa11.86□□□□□ -0.51
RRP1B-202ENST00000470886 POLR2DO15514 142 aaKnown RBP11.86□□□□□ -0.51
RRP1B-202ENST00000470886 DMTNQ08495 405 aa11.86□□□□□ -0.51
RRP1B-202ENST00000470886 PAK1Q13153 545 aa11.86□□□□□ -0.51
RRP1B-202ENST00000470886 KRT79Q5XKE5 535 aa11.86□□□□□ -0.51
RRP1B-202ENST00000470886 SAMD1Q6SPF0 538 aaPredicted RBP11.86□□□□□ -0.51
RRP1B-202ENST00000470886 CERS3Q8IU89 383 aa11.86□□□□□ -0.51
RRP1B-202ENST00000470886 SARM1Q6SZW1 724 aa11.85□□□□□ -0.51
RRP1B-202ENST00000470886 CCDC91Q7Z6B0 441 aa11.85□□□□□ -0.51
RRP1B-202ENST00000470886 ZSCAN29Q8IWY8 852 aaPredicted RBP11.85□□□□□ -0.51
RRP1B-202ENST00000470886 AFAP1L1Q8TED9 768 aa11.85□□□□□ -0.51
RRP1B-202ENST00000470886 LPIN2Q92539 896 aa11.85□□□□□ -0.51
RRP1B-202ENST00000470886 WWC3Q9ULE0 1092 aa11.85□□□□□ -0.51
RRP1B-202ENST00000470886 DENND2AQ9ULE3 1009 aa11.85□□□□□ -0.51
RRP1B-202ENST00000470886 PYCARDQ9ULZ3 195 aa11.85□□□□□ -0.51
RRP1B-202ENST00000470886 ZMYM6O95789 1325 aa11.85□□□□□ -0.51
RRP1B-202ENST00000470886 TTC31Q49AM3 519 aaPredicted RBP11.85□□□□□ -0.51
RRP1B-202ENST00000470886 VWA3BQ502W6 1294 aa11.85□□□□□ -0.51
RRP1B-202ENST00000470886 B4GALNT4Q76KP1 1039 aa11.85□□□□□ -0.51
RRP1B-202ENST00000470886 TBC1D5Q92609 795 aa11.85□□□□□ -0.51
RRP1B-202ENST00000470886 STX10O60499 249 aa11.85□□□□□ -0.51
RRP1B-202ENST00000470886 PDE8AO60658 829 aa11.85□□□□□ -0.51
RRP1B-202ENST00000470886 PPP6R2O75170 966 aa11.85□□□□□ -0.51
RRP1B-202ENST00000470886 RHOXF2BP0C7M4 288 aa11.85□□□□□ -0.51
RRP1B-202ENST00000470886 EZRP15311 586 aaKnown RBP11.85□□□□□ -0.51
RRP1B-202ENST00000470886 MATR3P43243 847 aaKnown RBP eCLIP11.85□□□□□ -0.51
RRP1B-202ENST00000470886 NAPAP54920 295 aa11.85□□□□□ -0.51
RRP1B-202ENST00000470886 KIAA0753Q2KHM9 967 aa11.85□□□□□ -0.51
RRP1B-202ENST00000470886 FBXO18Q8NFZ0 1043 aa11.85□□□□□ -0.51
RRP1B-202ENST00000470886 KLHDC4Q8TBB5 520 aa11.85□□□□□ -0.51
RRP1B-202ENST00000470886 PSMD1Q99460 953 aa11.85□□□□□ -0.51
RRP1B-202ENST00000470886 RHOXF2Q9BQY4 288 aa11.85□□□□□ -0.51
RRP1B-202ENST00000470886 ANKRD2Q9GZV1 360 aa11.85□□□□□ -0.51
RRP1B-202ENST00000470886 TSKSQ9UJT2 592 aa11.85□□□□□ -0.51
RRP1B-202ENST00000470886 ZNF215Q9UL58 517 aaPredicted RBP11.85□□□□□ -0.51
RRP1B-202ENST00000470886 PCDHA7Q9UN72 937 aa11.85□□□□□ -0.51
RRP1B-202ENST00000470886 MROH5Q6ZUA9 1318 aa11.85□□□□□ -0.51
RRP1B-202ENST00000470886 MPHOSPH10O00566 681 aaKnown RBP11.85□□□□□ -0.51
RRP1B-202ENST00000470886 TBCAO75347 108 aaKnown RBP11.85□□□□□ -0.51
RRP1B-202ENST00000470886 CIAO1O76071 339 aa11.85□□□□□ -0.51
RRP1B-202ENST00000470886 HLA-DOAP06340 250 aa11.85□□□□□ -0.51
RRP1B-202ENST00000470886 NECTIN1Q15223 517 aa11.85□□□□□ -0.51
RRP1B-202ENST00000470886 DZIP3Q86Y13 1208 aaKnown RBP11.85□□□□□ -0.51
RRP1B-202ENST00000470886 MMRN2Q9H8L6 949 aa11.85□□□□□ -0.51
RRP1B-202ENST00000470886 BCCIPQ9P287 314 aaKnown RBP eCLIP11.85□□□□□ -0.51
RRP1B-202ENST00000470886 CEMIPQ8WUJ3 1361 aa11.84□□□□□ -0.51
RRP1B-202ENST00000470886 HSPD1P10809 573 aaKnown RBP11.84□□□□□ -0.51
RRP1B-202ENST00000470886 GTF2A1P52655 376 aaPredicted RBP11.84□□□□□ -0.51
RRP1B-202ENST00000470886 CNNM4Q6P4Q7 775 aa11.84□□□□□ -0.51
RRP1B-202ENST00000470886 HEATR3Q7Z4Q2 680 aa11.84□□□□□ -0.51
RRP1B-202ENST00000470886 RRP36Q96EU6 259 aaKnown RBP11.84□□□□□ -0.51
RRP1B-202ENST00000470886 NYXQ9GZU5 481 aa11.84□□□□□ -0.51
RRP1B-202ENST00000470886 STX8Q9UNK0 236 aa11.84□□□□□ -0.51
RRP1B-202ENST00000470886 PHLPP2Q6ZVD8 1323 aa11.84□□□□□ -0.51
RRP1B-202ENST00000470886 SH3TC1Q8TE82 1336 aa11.84□□□□□ -0.51
RRP1B-202ENST00000470886 ADCK5Q3MIX3 580 aa11.84□□□□□ -0.51
RRP1B-202ENST00000470886 TCERG1LQ5VWI1 586 aa11.84□□□□□ -0.51
RRP1B-202ENST00000470886 PAIP2Q9BPZ3 127 aaKnown RBP11.84□□□□□ -0.51
RRP1B-202ENST00000470886 ATG3Q9NT62 314 aa11.84□□□□□ -0.51
RRP1B-202ENST00000470886 ERVV-2B6SEH9 535 aa11.84□□□□□ -0.51
RRP1B-202ENST00000470886 MNAT1P51948 309 aa11.84□□□□□ -0.51
RRP1B-202ENST00000470886 LRMPQ12912 555 aa11.84□□□□□ -0.51
RRP1B-202ENST00000470886 TTC38Q5R3I4 469 aa11.84□□□□□ -0.51
RRP1B-202ENST00000470886 UBA5Q9GZZ9 404 aa11.84□□□□□ -0.51
RRP1B-202ENST00000470886 GOPCQ9HD26 462 aa11.84□□□□□ -0.51
RRP1B-202ENST00000470886 VWA3AA6NCI4 1184 aa11.83□□□□□ -0.51
RRP1B-202ENST00000470886 PDIA3P30101 505 aaKnown RBP11.83□□□□□ -0.51
RRP1B-202ENST00000470886 IL17RAQ96F46 866 aa11.83□□□□□ -0.51
RRP1B-202ENST00000470886 SPTLC3Q9NUV7 552 aa11.83□□□□□ -0.51
RRP1B-202ENST00000470886 CTNND2Q9UQB3 1225 aa11.83□□□□□ -0.51
RRP1B-202ENST00000470886 PHKG2P15735 406 aa11.83□□□□□ -0.52
RRP1B-202ENST00000470886 ITGA6P23229 1130 aa11.83□□□□□ -0.52
RRP1B-202ENST00000470886 ZMYM1Q5SVZ6 1142 aa11.83□□□□□ -0.52
RRP1B-202ENST00000470886 CFAP58Q5T655 872 aa11.83□□□□□ -0.52
RRP1B-202ENST00000470886 KRBA2Q6ZNG9 492 aa11.83□□□□□ -0.52
RRP1B-202ENST00000470886 RPGRQ92834 1020 aaKnown RBP11.83□□□□□ -0.52
RRP1B-202ENST00000470886 ARHGAP23Q9P227 1491 aa11.83□□□□□ -0.52
RRP1B-202ENST00000470886 RBM5P52756 815 aaKnown RBP eCLIP11.83□□□□□ -0.52
RRP1B-202ENST00000470886 TBC1D8BQ0IIM8 1120 aa11.83□□□□□ -0.52
RRP1B-202ENST00000470886 NOSTRINQ8IVI9 506 aa11.83□□□□□ -0.52
RRP1B-202ENST00000470886 ZNF496Q96IT1 587 aaPredicted RBP11.83□□□□□ -0.52
RRP1B-202ENST00000470886 LZTS2Q9BRK4 669 aa11.83□□□□□ -0.52
RRP1B-202ENST00000470886 NUCKS1Q9H1E3 243 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms