RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 PCDHAC2Q9Y5I4 1007 aa11.5□□□□□ -0.57
CCM2-204ENST00000470837 MYO5AQ9Y4I1 1855 aaKnown RBP11.49□□□□□ -0.57
CCM2-204ENST00000470837 CHD4Q14839 1912 aa11.49□□□□□ -0.57
CCM2-204ENST00000470837 IFIT3O14879 490 aaKnown RBP11.49□□□□□ -0.57
CCM2-204ENST00000470837 ORC4O43929 436 aa11.49□□□□□ -0.57
CCM2-204ENST00000470837 PRDM1O75626 825 aa11.49□□□□□ -0.57
CCM2-204ENST00000470837 DDNO94850 711 aaPredicted RBP11.49□□□□□ -0.57
CCM2-204ENST00000470837 TSPY3P0CV98 308 aa11.49□□□□□ -0.57
CCM2-204ENST00000470837 TSPY8P0CW00 308 aa11.49□□□□□ -0.57
CCM2-204ENST00000470837 NFIAQ12857 509 aa11.49□□□□□ -0.57
CCM2-204ENST00000470837 TMEM67Q5HYA8 995 aa11.49□□□□□ -0.57
CCM2-204ENST00000470837 SAMD7Q7Z3H4 446 aa11.49□□□□□ -0.57
CCM2-204ENST00000470837 MB21D2Q8IYB1 491 aaPredicted RBP11.49□□□□□ -0.57
CCM2-204ENST00000470837 TMTC2Q8N394 836 aa11.49□□□□□ -0.57
CCM2-204ENST00000470837 MTA3Q9BTC8 594 aa11.49□□□□□ -0.57
CCM2-204ENST00000470837 NBPF3Q9H094 633 aa11.49□□□□□ -0.57
CCM2-204ENST00000470837 ALDH8A1Q9H2A2 487 aaPredicted RBP11.49□□□□□ -0.57
CCM2-204ENST00000470837 DDX4Q9NQI0 724 aaKnown RBP11.49□□□□□ -0.57
CCM2-204ENST00000470837 SH2B1Q9NRF2 756 aaPredicted RBP11.49□□□□□ -0.57
CCM2-204ENST00000470837 NEDD4P46934 1319 aa11.49□□□□□ -0.57
CCM2-204ENST00000470837 MYH2Q9UKX2 1941 aa11.48□□□□□ -0.57
CCM2-204ENST00000470837 SCN9AQ15858 1988 aa11.48□□□□□ -0.57
CCM2-204ENST00000470837 IQCA1LA6NCM1 817 aa11.48□□□□□ -0.57
CCM2-204ENST00000470837 CCDC69A6NI79 296 aa11.48□□□□□ -0.57
CCM2-204ENST00000470837 PLCD1P51178 756 aa11.48□□□□□ -0.57
CCM2-204ENST00000470837 NBPF9Q3BBW0 867 aa11.48□□□□□ -0.57
CCM2-204ENST00000470837 C16orf86Q6ZW13 317 aa11.48□□□□□ -0.57
CCM2-204ENST00000470837 CHST3Q7LGC8 479 aa11.48□□□□□ -0.57
CCM2-204ENST00000470837 FAM83AQ86UY5 434 aa11.48□□□□□ -0.57
CCM2-204ENST00000470837 APOBEC3FQ8IUX4 373 aaKnown RBP11.48□□□□□ -0.57
CCM2-204ENST00000470837 FOXP4Q8IVH2 680 aaPredicted RBP11.48□□□□□ -0.57
CCM2-204ENST00000470837 FAM151AQ8WW52 585 aa11.48□□□□□ -0.57
CCM2-204ENST00000470837 BRF1Q92994 677 aa11.48□□□□□ -0.57
CCM2-204ENST00000470837 HOOK2Q96ED9 719 aa11.48□□□□□ -0.57
CCM2-204ENST00000470837 DYNLL2Q96FJ2 89 aa11.48□□□□□ -0.57
CCM2-204ENST00000470837 TCEANC2Q96MN5 208 aa11.48□□□□□ -0.57
CCM2-204ENST00000470837 TTC14Q96N46 770 aa11.48□□□□□ -0.57
CCM2-204ENST00000470837 CSRNP1Q96S65 589 aa11.48□□□□□ -0.57
CCM2-204ENST00000470837 LRRC2Q9BYS8 371 aa11.48□□□□□ -0.57
CCM2-204ENST00000470837 EHD4Q9H223 541 aa11.48□□□□□ -0.57
CCM2-204ENST00000470837 ADARB2Q9NS39 739 aaKnown RBP11.48□□□□□ -0.57
CCM2-204ENST00000470837 ZSWIM5Q9P217 1185 aa11.48□□□□□ -0.57
CCM2-204ENST00000470837 FAM198AQ9UFP1 575 aa11.48□□□□□ -0.57
CCM2-204ENST00000470837 ANGEL1Q9UNK9 670 aaKnown RBP11.48□□□□□ -0.57
CCM2-204ENST00000470837 ROBO3Q96MS0 1386 aa11.48□□□□□ -0.57
CCM2-204ENST00000470837 GLTPD2A6NH11 291 aa11.47□□□□□ -0.57
CCM2-204ENST00000470837 FGRP09769 529 aa11.47□□□□□ -0.57
CCM2-204ENST00000470837 CDK8P49336 464 aa11.47□□□□□ -0.57
CCM2-204ENST00000470837 TFAP4Q01664 338 aa11.47□□□□□ -0.57
CCM2-204ENST00000470837 EXOSC10Q01780 885 aaKnown RBP11.47□□□□□ -0.57
CCM2-204ENST00000470837 WTAPQ15007 396 aa11.47□□□□□ -0.57
CCM2-204ENST00000470837 PPP4R3BQ5MIZ7 849 aa11.47□□□□□ -0.57
CCM2-204ENST00000470837 ZBED3Q96IU2 234 aaPredicted RBP11.47□□□□□ -0.57
CCM2-204ENST00000470837 TMX3Q96JJ7 454 aa11.47□□□□□ -0.57
CCM2-204ENST00000470837 INCENPQ9NQS7 918 aa11.47□□□□□ -0.57
CCM2-204ENST00000470837 HACL1Q9UJ83 578 aa11.47□□□□□ -0.57
CCM2-204ENST00000470837 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.47□□□□□ -0.57
CCM2-204ENST00000470837 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.47□□□□□ -0.57
CCM2-204ENST00000470837 SHTN1A0MZ66 631 aa11.46□□□□□ -0.57
CCM2-204ENST00000470837 DHX16O60231 1041 aaKnown RBP11.46□□□□□ -0.57
CCM2-204ENST00000470837 CD2BP2O95400 341 aaKnown RBP11.46□□□□□ -0.57
CCM2-204ENST00000470837 EPS15P42566 896 aa11.46□□□□□ -0.57
CCM2-204ENST00000470837 SLC4A3P48751 1232 aa11.46□□□□□ -0.57
CCM2-204ENST00000470837 IFIT1BQ5T764 474 aaKnown RBP11.46□□□□□ -0.57
CCM2-204ENST00000470837 CYB5R4Q7L1T6 521 aa11.46□□□□□ -0.57
CCM2-204ENST00000470837 FBXL16Q8N461 479 aa11.46□□□□□ -0.57
CCM2-204ENST00000470837 DCPSQ96C86 337 aaKnown RBP11.46□□□□□ -0.57
CCM2-204ENST00000470837 CCDC17Q96LX7 622 aa11.46□□□□□ -0.57
CCM2-204ENST00000470837 ZSCAN10Q96SZ4 725 aaPredicted RBP11.46□□□□□ -0.57
CCM2-204ENST00000470837 SLKQ9H2G2 1235 aaPredicted RBP11.46□□□□□ -0.57
CCM2-204ENST00000470837 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.46□□□□□ -0.57
CCM2-204ENST00000470837 HERC5Q9UII4 1024 aaKnown RBP11.46□□□□□ -0.57
CCM2-204ENST00000470837 ATRNL1Q5VV63 1379 aa11.45□□□□□ -0.58
CCM2-204ENST00000470837 TNKSO95271 1327 aa11.45□□□□□ -0.58
CCM2-204ENST00000470837 KLF18A0A0U1RQI7 1052 aa11.45□□□□□ -0.58
CCM2-204ENST00000470837 DDTLA6NHG4 134 aaPredicted RBP11.45□□□□□ -0.58
CCM2-204ENST00000470837 MPHOSPH10O00566 681 aaKnown RBP11.45□□□□□ -0.58
CCM2-204ENST00000470837 SH2B2O14492 632 aaPredicted RBP11.45□□□□□ -0.58
CCM2-204ENST00000470837 LIFRP42702 1097 aa11.45□□□□□ -0.58
CCM2-204ENST00000470837 TOB2Q14106 344 aaPredicted RBP11.45□□□□□ -0.58
CCM2-204ENST00000470837 RASA3Q14644 834 aa11.45□□□□□ -0.58
CCM2-204ENST00000470837 FAM47AQ5JRC9 791 aa11.45□□□□□ -0.58
CCM2-204ENST00000470837 ANGEL2Q5VTE6 544 aaKnown RBP11.45□□□□□ -0.58
CCM2-204ENST00000470837 CPLX2Q6PUV4 134 aaKnown RBP11.45□□□□□ -0.58
CCM2-204ENST00000470837 USP50Q70EL3 339 aaPredicted RBP11.45□□□□□ -0.58
CCM2-204ENST00000470837 CATIPQ7Z7H3 387 aa11.45□□□□□ -0.58
CCM2-204ENST00000470837 ZFPM1Q8IX07 1006 aa11.45□□□□□ -0.58
CCM2-204ENST00000470837 SPRYD3Q8NCJ5 442 aa11.45□□□□□ -0.58
CCM2-204ENST00000470837 L3MBTL3Q96JM7 780 aaPredicted RBP11.45□□□□□ -0.58
CCM2-204ENST00000470837 ZKSCAN3Q9BRR0 538 aa11.45□□□□□ -0.58
CCM2-204ENST00000470837 LARP6Q9BRS8 491 aaKnown RBP11.45□□□□□ -0.58
CCM2-204ENST00000470837 CABP5Q9NP86 173 aa11.45□□□□□ -0.58
CCM2-204ENST00000470837 SLC12A7Q9Y666 1083 aa11.45□□□□□ -0.58
CCM2-204ENST00000470837 COL2A1P02458 1487 aaPredicted RBP11.44□□□□□ -0.58
CCM2-204ENST00000470837 PSME4Q14997 1843 aa11.44□□□□□ -0.58
CCM2-204ENST00000470837 GOLGB1Q14789 3259 aaKnown RBP11.44□□□□□ -0.58
CCM2-204ENST00000470837 GOLGA8BA8MQT2 603 aa11.44□□□□□ -0.58
CCM2-204ENST00000470837 CPLX1O14810 134 aa11.44□□□□□ -0.58
CCM2-204ENST00000470837 RASA1P20936 1047 aa11.44□□□□□ -0.58
CCM2-204ENST00000470837 ANTXR2P58335 489 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms