RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 CDX2Q99626 313 aaPredicted RBP11.11□□□□□ -0.63
SYNGAP1-205ENST00000470232 PFASO15067 1338 aa11.1□□□□□ -0.63
SYNGAP1-205ENST00000470232 COL6A1P12109 1028 aa11.1□□□□□ -0.63
SYNGAP1-205ENST00000470232 COL9A1P20849 921 aa11.1□□□□□ -0.63
SYNGAP1-205ENST00000470232 TRIM32Q13049 653 aa11.1□□□□□ -0.63
SYNGAP1-205ENST00000470232 PDE3AQ14432 1141 aa11.1□□□□□ -0.63
SYNGAP1-205ENST00000470232 DIXDC1Q155Q3 683 aa11.1□□□□□ -0.63
SYNGAP1-205ENST00000470232 LRRC26Q2I0M4 334 aa11.1□□□□□ -0.63
SYNGAP1-205ENST00000470232 TREML2Q5T2D2 321 aa11.1□□□□□ -0.63
SYNGAP1-205ENST00000470232 MAP3K21Q5TCX8 1036 aa11.1□□□□□ -0.63
SYNGAP1-205ENST00000470232 ZFPM1Q8IX07 1006 aa11.1□□□□□ -0.63
SYNGAP1-205ENST00000470232 ZGPATQ8N5A5 531 aaKnown RBP11.1□□□□□ -0.63
SYNGAP1-205ENST00000470232 VGLL2Q8N8G2 317 aa11.1□□□□□ -0.63
SYNGAP1-205ENST00000470232 SOCS4Q8WXH5 440 aa11.1□□□□□ -0.63
SYNGAP1-205ENST00000470232 LPIN2Q92539 896 aa11.1□□□□□ -0.63
SYNGAP1-205ENST00000470232 SEMA6BQ9H3T3 888 aa11.1□□□□□ -0.63
SYNGAP1-205ENST00000470232 PRKRIP1Q9H875 184 aaPredicted RBP11.1□□□□□ -0.63
SYNGAP1-205ENST00000470232 DNAH12Q6ZR08 3092 aa11.1□□□□□ -0.63
SYNGAP1-205ENST00000470232 EYSQ5T1H1 3165 aa11.09□□□□□ -0.63
SYNGAP1-205ENST00000470232 TBC1D12O60347 775 aa11.09□□□□□ -0.63
SYNGAP1-205ENST00000470232 ZKSCAN1P17029 563 aaPredicted RBP11.09□□□□□ -0.63
SYNGAP1-205ENST00000470232 FGFR2P21802 821 aa11.09□□□□□ -0.63
SYNGAP1-205ENST00000470232 SPP2Q13103 211 aa11.09□□□□□ -0.63
SYNGAP1-205ENST00000470232 ZNF280CQ8ND82 737 aa11.09□□□□□ -0.63
SYNGAP1-205ENST00000470232 TRIB2Q92519 343 aa11.09□□□□□ -0.63
SYNGAP1-205ENST00000470232 OSBPL5Q9H0X9 879 aaPredicted RBP11.09□□□□□ -0.63
SYNGAP1-205ENST00000470232 AS3MTQ9HBK9 375 aa11.09□□□□□ -0.63
SYNGAP1-205ENST00000470232 MRS2Q9HD23 443 aa11.09□□□□□ -0.63
SYNGAP1-205ENST00000470232 DENND2AQ9ULE3 1009 aa11.09□□□□□ -0.63
SYNGAP1-205ENST00000470232 PRUNE2Q8WUY3 3088 aa11.08□□□□□ -0.64
SYNGAP1-205ENST00000470232 PRDX5P30044 214 aa11.08□□□□□ -0.64
SYNGAP1-205ENST00000470232 MAPK4P31152 587 aa11.08□□□□□ -0.64
SYNGAP1-205ENST00000470232 RGS2P41220 211 aa11.08□□□□□ -0.64
SYNGAP1-205ENST00000470232 IRX3P78415 501 aaPredicted RBP11.08□□□□□ -0.64
SYNGAP1-205ENST00000470232 CACNB2Q08289 660 aaPredicted RBP11.08□□□□□ -0.64
SYNGAP1-205ENST00000470232 RABL6Q3YEC7 729 aaPredicted RBP11.08□□□□□ -0.64
SYNGAP1-205ENST00000470232 GPRC5AQ8NFJ5 357 aa11.08□□□□□ -0.64
SYNGAP1-205ENST00000470232 SENP6Q9GZR1 1112 aaPredicted RBP11.08□□□□□ -0.64
SYNGAP1-205ENST00000470232 ASCC2Q9H1I8 757 aaPredicted RBP11.08□□□□□ -0.64
SYNGAP1-205ENST00000470232 BICC1Q9H694 974 aaKnown RBP11.08□□□□□ -0.64
SYNGAP1-205ENST00000470232 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.08□□□□□ -0.64
SYNGAP1-205ENST00000470232 CWC22Q9HCG8 908 aaKnown RBP11.08□□□□□ -0.64
SYNGAP1-205ENST00000470232 MORF4L1Q9UBU8 362 aa11.08□□□□□ -0.64
SYNGAP1-205ENST00000470232 SALL1Q9NSC2 1324 aa11.08□□□□□ -0.64
SYNGAP1-205ENST00000470232 PTPRFP10586 1907 aa11.07□□□□□ -0.64
SYNGAP1-205ENST00000470232 ATRNL1Q5VV63 1379 aa11.07□□□□□ -0.64
SYNGAP1-205ENST00000470232 USP17L5A8MUK1 530 aa11.07□□□□□ -0.64
SYNGAP1-205ENST00000470232 TNFRSF10AO00220 468 aa11.07□□□□□ -0.64
SYNGAP1-205ENST00000470232 SEMA3EO15041 775 aa11.07□□□□□ -0.64
SYNGAP1-205ENST00000470232 NBPF7P0C2Y1 421 aaPredicted RBP11.07□□□□□ -0.64
SYNGAP1-205ENST00000470232 HMGCS2P54868 508 aa11.07□□□□□ -0.64
SYNGAP1-205ENST00000470232 LHX8Q68G74 356 aa11.07□□□□□ -0.64
SYNGAP1-205ENST00000470232 GTF3C2Q8WUA4 911 aaPredicted RBP11.07□□□□□ -0.64
SYNGAP1-205ENST00000470232 KAZALD1Q96I82 304 aa11.07□□□□□ -0.64
SYNGAP1-205ENST00000470232 SSUH2Q9Y2M2 353 aa11.07□□□□□ -0.64
SYNGAP1-205ENST00000470232 MYH13Q9UKX3 1938 aa11.07□□□□□ -0.64
SYNGAP1-205ENST00000470232 DOCK2Q92608 1830 aa11.07□□□□□ -0.64
SYNGAP1-205ENST00000470232 UTYO14607 1347 aa11.07□□□□□ -0.64
SYNGAP1-205ENST00000470232 COL2A1P02458 1487 aaPredicted RBP11.06□□□□□ -0.64
SYNGAP1-205ENST00000470232 DOCK1Q14185 1865 aa11.06□□□□□ -0.64
SYNGAP1-205ENST00000470232 DDTLA6NHG4 134 aaPredicted RBP11.06□□□□□ -0.64
SYNGAP1-205ENST00000470232 MSCO60682 206 aa11.06□□□□□ -0.64
SYNGAP1-205ENST00000470232 GLRX3O76003 335 aaKnown RBP11.06□□□□□ -0.64
SYNGAP1-205ENST00000470232 FOSL2P15408 326 aa11.06□□□□□ -0.64
SYNGAP1-205ENST00000470232 SMAD3P84022 425 aaKnown RBP11.06□□□□□ -0.64
SYNGAP1-205ENST00000470232 EXOSC9Q06265 439 aaKnown RBP11.06□□□□□ -0.64
SYNGAP1-205ENST00000470232 PICALMQ13492 652 aa11.06□□□□□ -0.64
SYNGAP1-205ENST00000470232 CCDC184Q52MB2 194 aa11.06□□□□□ -0.64
SYNGAP1-205ENST00000470232 SH3D19Q5HYK7 790 aa11.06□□□□□ -0.64
SYNGAP1-205ENST00000470232 TJAP1Q5JTD0 557 aa11.06□□□□□ -0.64
SYNGAP1-205ENST00000470232 SPTY2D1Q68D10 685 aaPredicted RBP11.06□□□□□ -0.64
SYNGAP1-205ENST00000470232 SH3BP5LQ7L8J4 393 aa11.06□□□□□ -0.64
SYNGAP1-205ENST00000470232 DZIP1Q86YF9 867 aaKnown RBP11.06□□□□□ -0.64
SYNGAP1-205ENST00000470232 FAM9BQ8IZU0 186 aa11.06□□□□□ -0.64
SYNGAP1-205ENST00000470232 FAM163AQ96GL9 167 aaPredicted RBP11.06□□□□□ -0.64
SYNGAP1-205ENST00000470232 TMOD4Q9NZQ9 345 aa11.06□□□□□ -0.64
SYNGAP1-205ENST00000470232 FANCIQ9NVI1 1328 aa11.06□□□□□ -0.64
SYNGAP1-205ENST00000470232 EYA2O00167 538 aa11.05□□□□□ -0.64
SYNGAP1-205ENST00000470232 MAP4K4O95819 1239 aaPredicted RBP11.05□□□□□ -0.64
SYNGAP1-205ENST00000470232 HOXA7P31268 230 aaPredicted RBP11.05□□□□□ -0.64
SYNGAP1-205ENST00000470232 MFSD14CQ5VZR4 134 aa11.05□□□□□ -0.64
SYNGAP1-205ENST00000470232 WDR63Q8IWG1 891 aa11.05□□□□□ -0.64
SYNGAP1-205ENST00000470232 MYLIPQ8WY64 445 aa11.05□□□□□ -0.64
SYNGAP1-205ENST00000470232 PHIPQ8WWQ0 1821 aa11.05□□□□□ -0.64
SYNGAP1-205ENST00000470232 TMEM265A0A087WTH1 108 aa11.04□□□□□ -0.64
SYNGAP1-205ENST00000470232 C19orf81C9J6K1 198 aa11.04□□□□□ -0.64
SYNGAP1-205ENST00000470232 CCND3P30281 292 aaPredicted RBP11.04□□□□□ -0.64
SYNGAP1-205ENST00000470232 CAP2P40123 477 aa11.04□□□□□ -0.64
SYNGAP1-205ENST00000470232 SHHQ15465 462 aa11.04□□□□□ -0.64
SYNGAP1-205ENST00000470232 PLEKHH3Q7Z736 793 aa11.04□□□□□ -0.64
SYNGAP1-205ENST00000470232 CCDC84Q86UT8 332 aaPredicted RBP11.04□□□□□ -0.64
SYNGAP1-205ENST00000470232 ANKRD44Q8N8A2 993 aa11.04□□□□□ -0.64
SYNGAP1-205ENST00000470232 KLHDC4Q8TBB5 520 aa11.04□□□□□ -0.64
SYNGAP1-205ENST00000470232 FAM122AQ96E09 287 aa11.04□□□□□ -0.64
SYNGAP1-205ENST00000470232 EDC3Q96F86 508 aaKnown RBP11.04□□□□□ -0.64
SYNGAP1-205ENST00000470232 P2RX7Q99572 595 aaKnown RBP11.04□□□□□ -0.64
SYNGAP1-205ENST00000470232 APBA2Q99767 749 aa11.04□□□□□ -0.64
SYNGAP1-205ENST00000470232 CEP126Q9P2H0 1117 aa11.04□□□□□ -0.64
SYNGAP1-205ENST00000470232 FBXO3Q9UK99 471 aa11.04□□□□□ -0.64
SYNGAP1-205ENST00000470232 GAKO14976 1311 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms