RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 SART3Q15020 963 aaKnown RBP16.96■□□□□ 0.31
CBWD3-205ENST00000469687 ZRSR1Q15695 479 aaKnown RBP16.96■□□□□ 0.31
CBWD3-205ENST00000469687 DIS3L2Q8IYB7 885 aaKnown RBP16.96■□□□□ 0.31
CBWD3-205ENST00000469687 ZNF654Q8IZM8 581 aa16.96■□□□□ 0.31
CBWD3-205ENST00000469687 FAM84BQ96KN1 310 aaPredicted RBP16.96■□□□□ 0.31
CBWD3-205ENST00000469687 BSDC1Q9NW68 430 aaPredicted RBP16.96■□□□□ 0.31
CBWD3-205ENST00000469687 LTBP4Q8N2S1 1624 aa16.95■□□□□ 0.3
CBWD3-205ENST00000469687 NR5A1Q13285 461 aa16.95■□□□□ 0.3
CBWD3-205ENST00000469687 UBE4AQ14139 1066 aa16.95■□□□□ 0.3
CBWD3-205ENST00000469687 RESP18Q5W5W9 173 aa16.95■□□□□ 0.3
CBWD3-205ENST00000469687 NOSTRINQ8IVI9 506 aa16.95■□□□□ 0.3
CBWD3-205ENST00000469687 SRP68Q9UHB9 627 aaKnown RBP16.95■□□□□ 0.3
CBWD3-205ENST00000469687 TNKSO95271 1327 aa16.95■□□□□ 0.3
CBWD3-205ENST00000469687 ERICH2A1L162 156 aa16.95■□□□□ 0.3
CBWD3-205ENST00000469687 RIOK3O14730 519 aaKnown RBP16.95■□□□□ 0.3
CBWD3-205ENST00000469687 PRDM1O75626 825 aa16.95■□□□□ 0.3
CBWD3-205ENST00000469687 PIP4K2BP78356 416 aa16.95■□□□□ 0.3
CBWD3-205ENST00000469687 NCAPHQ15003 741 aa16.95■□□□□ 0.3
CBWD3-205ENST00000469687 SEC23AQ15436 765 aa16.95■□□□□ 0.3
CBWD3-205ENST00000469687 CRACR2BQ8N4Y2 399 aaPredicted RBP16.95■□□□□ 0.3
CBWD3-205ENST00000469687 FANCBQ8NB91 859 aa16.95■□□□□ 0.3
CBWD3-205ENST00000469687 SHISA4Q96DD7 197 aa16.95■□□□□ 0.3
CBWD3-205ENST00000469687 PDCL3Q9H2J4 239 aa16.95■□□□□ 0.3
CBWD3-205ENST00000469687 USP27XA6NNY8 438 aa16.94■□□□□ 0.3
CBWD3-205ENST00000469687 GTF2F1P35269 517 aaKnown RBP eCLIP16.94■□□□□ 0.3
CBWD3-205ENST00000469687 RBM6P78332 1123 aaKnown RBP16.94■□□□□ 0.3
CBWD3-205ENST00000469687 LONRF3Q496Y0 759 aa16.94■□□□□ 0.3
CBWD3-205ENST00000469687 TRIM22Q8IYM9 498 aa16.94■□□□□ 0.3
CBWD3-205ENST00000469687 JMYQ8N9B5 988 aa16.94■□□□□ 0.3
CBWD3-205ENST00000469687 OXER1Q8TDS5 423 aa16.94■□□□□ 0.3
CBWD3-205ENST00000469687 BPIFA3Q9BQP9 254 aa16.94■□□□□ 0.3
CBWD3-205ENST00000469687 UBAC1Q9BSL1 405 aa16.94■□□□□ 0.3
CBWD3-205ENST00000469687 RNF41Q9H4P4 317 aaPredicted RBP16.94■□□□□ 0.3
CBWD3-205ENST00000469687 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.94■□□□□ 0.3
CBWD3-205ENST00000469687 DUOX1Q9NRD9 1551 aa16.94■□□□□ 0.3
CBWD3-205ENST00000469687 GNL3LQ9NVN8 582 aaKnown RBP16.94■□□□□ 0.3
CBWD3-205ENST00000469687 GTF2E1P29083 439 aaPredicted RBP16.94■□□□□ 0.3
CBWD3-205ENST00000469687 TIGD1Q96MW7 591 aa16.94■□□□□ 0.3
CBWD3-205ENST00000469687 XPO4Q9C0E2 1151 aaKnown RBP16.94■□□□□ 0.3
CBWD3-205ENST00000469687 BAZ2BQ9UIF8 2168 aaKnown RBP16.93■□□□□ 0.3
CBWD3-205ENST00000469687 FOXN1O15353 648 aa16.93■□□□□ 0.3
CBWD3-205ENST00000469687 CCZ1BP86790 482 aa16.93■□□□□ 0.3
CBWD3-205ENST00000469687 CCZ1P86791 482 aaPredicted RBP16.93■□□□□ 0.3
CBWD3-205ENST00000469687 CAVIN4Q5BKX8 364 aa16.93■□□□□ 0.3
CBWD3-205ENST00000469687 METTL16Q86W50 562 aaKnown RBP16.93■□□□□ 0.3
CBWD3-205ENST00000469687 ZNF710Q8N1W2 664 aa16.93■□□□□ 0.3
CBWD3-205ENST00000469687 ENAHQ8N8S7 591 aaPredicted RBP16.93■□□□□ 0.3
CBWD3-205ENST00000469687 HSD3B7Q9H2F3 369 aa16.93■□□□□ 0.3
CBWD3-205ENST00000469687 IFNKQ9P0W0 207 aa16.93■□□□□ 0.3
CBWD3-205ENST00000469687 TUBE1Q9UJT0 475 aa16.93■□□□□ 0.3
CBWD3-205ENST00000469687 FAM237AA0A1B0GTK4 181 aa16.92■□□□□ 0.3
CBWD3-205ENST00000469687 hCG_1642624A0A1W2PR95 340 aa16.92■□□□□ 0.3
CBWD3-205ENST00000469687 DEXIO95424 95 aa16.92■□□□□ 0.3
CBWD3-205ENST00000469687 SLC51AQ86UW1 340 aa16.92■□□□□ 0.3
CBWD3-205ENST00000469687 AMIGO3Q86WK7 504 aa16.92■□□□□ 0.3
CBWD3-205ENST00000469687 FOXP4Q8IVH2 680 aaPredicted RBP16.92■□□□□ 0.3
CBWD3-205ENST00000469687 WASF1Q92558 559 aa16.92■□□□□ 0.3
CBWD3-205ENST00000469687 TFCP2L1Q9NZI6 479 aa16.92■□□□□ 0.3
CBWD3-205ENST00000469687 ANAPC4Q9UJX5 808 aa16.92■□□□□ 0.3
CBWD3-205ENST00000469687 KCNH3Q9ULD8 1083 aa16.92■□□□□ 0.3
CBWD3-205ENST00000469687 PCDHB6Q9Y5E3 794 aa16.92■□□□□ 0.3
CBWD3-205ENST00000469687 CUTAO60888 179 aa16.92■□□□□ 0.3
CBWD3-205ENST00000469687 SMC2O95347 1197 aa16.92■□□□□ 0.3
CBWD3-205ENST00000469687 LMOD1P29536 600 aaPredicted RBP16.92■□□□□ 0.3
CBWD3-205ENST00000469687 ESR2Q92731 530 aa16.92■□□□□ 0.3
CBWD3-205ENST00000469687 ARID3AQ99856 593 aa16.92■□□□□ 0.3
CBWD3-205ENST00000469687 JAG2Q9Y219 1238 aa16.92■□□□□ 0.3
CBWD3-205ENST00000469687 ZNF831Q5JPB2 1677 aa16.92■□□□□ 0.3
CBWD3-205ENST00000469687 SKILP12757 684 aa16.91■□□□□ 0.3
CBWD3-205ENST00000469687 ATP1A3P13637 1013 aa16.91■□□□□ 0.3
CBWD3-205ENST00000469687 ATP2B1P20020 1258 aa16.91■□□□□ 0.3
CBWD3-205ENST00000469687 SAFBQ15424 915 aaKnown RBP eCLIP16.91■□□□□ 0.3
CBWD3-205ENST00000469687 TMTC2Q8N394 836 aa16.91■□□□□ 0.3
CBWD3-205ENST00000469687 KRI1Q8N9T8 703 aaKnown RBP16.91■□□□□ 0.3
CBWD3-205ENST00000469687 FAM205CA6NFA0 338 aa16.91■□□□□ 0.3
CBWD3-205ENST00000469687 TNNT1P13805 278 aa16.91■□□□□ 0.3
CBWD3-205ENST00000469687 MTA3Q9BTC8 594 aa16.91■□□□□ 0.3
CBWD3-205ENST00000469687 FOXP1Q9H334 677 aaPredicted RBP16.91■□□□□ 0.3
CBWD3-205ENST00000469687 VPS54Q9P1Q0 977 aa16.91■□□□□ 0.3
CBWD3-205ENST00000469687 CCDC196A0A1B0GTZ2 297 aa16.9■□□□□ 0.3
CBWD3-205ENST00000469687 PLEKHA8P1O95397 391 aa16.9■□□□□ 0.3
CBWD3-205ENST00000469687 CHAF1AQ13111 956 aaPredicted RBP16.9■□□□□ 0.3
CBWD3-205ENST00000469687 TPD52L1Q16890 204 aaPredicted RBP16.9■□□□□ 0.3
CBWD3-205ENST00000469687 FAM182BQ5T319 152 aa16.9■□□□□ 0.3
CBWD3-205ENST00000469687 CTR9Q6PD62 1173 aa16.9■□□□□ 0.3
CBWD3-205ENST00000469687 KRBA2Q6ZNG9 492 aa16.9■□□□□ 0.3
CBWD3-205ENST00000469687 FBXO33Q7Z6M2 555 aa16.9■□□□□ 0.3
CBWD3-205ENST00000469687 CNNM3Q8NE01 707 aa16.9■□□□□ 0.3
CBWD3-205ENST00000469687 ZSCAN10Q96SZ4 725 aaPredicted RBP16.9■□□□□ 0.3
CBWD3-205ENST00000469687 FBXO2Q9UK22 296 aaPredicted RBP16.9■□□□□ 0.3
CBWD3-205ENST00000469687 CNTNAP4Q9C0A0 1308 aa16.9■□□□□ 0.3
CBWD3-205ENST00000469687 RPS8P62241 208 aaKnown RBP16.89■□□□□ 0.3
CBWD3-205ENST00000469687 MECOMQ03112 1051 aa16.89■□□□□ 0.3
CBWD3-205ENST00000469687 EARS2Q5JPH6 523 aaKnown RBP16.89■□□□□ 0.3
CBWD3-205ENST00000469687 SLC10A5Q5PT55 438 aa16.89■□□□□ 0.3
CBWD3-205ENST00000469687 TXNRD3Q86VQ6 643 aa16.89■□□□□ 0.3
CBWD3-205ENST00000469687 NSUN4Q96CB9 384 aaKnown RBP16.89■□□□□ 0.3
CBWD3-205ENST00000469687 CABP5Q9NP86 173 aa16.89■□□□□ 0.3
CBWD3-205ENST00000469687 AATFQ9NY61 560 aaKnown RBP eCLIP16.89■□□□□ 0.3
CBWD3-205ENST00000469687 DLEC1Q9Y238 1755 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms