RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 CCDC13Q8IYE1 715 aa10.2□□□□□ -0.78
SMARCE1-207ENST00000469334 ENOX1Q8TC92 643 aaKnown RBP10.2□□□□□ -0.78
SMARCE1-207ENST00000469334 COG3Q96JB2 828 aa10.2□□□□□ -0.78
SMARCE1-207ENST00000469334 PLCD4Q9BRC7 762 aa10.2□□□□□ -0.78
SMARCE1-207ENST00000469334 AGXT2Q9BYV1 514 aa10.2□□□□□ -0.78
SMARCE1-207ENST00000469334 DDX20Q9UHI6 824 aaKnown RBP10.2□□□□□ -0.78
SMARCE1-207ENST00000469334 HPSEQ9Y251 543 aa10.2□□□□□ -0.78
SMARCE1-207ENST00000469334 A0A1B0GTH6 734 aa10.19□□□□□ -0.78
SMARCE1-207ENST00000469334 MPHOSPH10O00566 681 aaKnown RBP10.19□□□□□ -0.78
SMARCE1-207ENST00000469334 TAF5LO75529 589 aa10.19□□□□□ -0.78
SMARCE1-207ENST00000469334 FBLN1P23142 703 aa10.19□□□□□ -0.78
SMARCE1-207ENST00000469334 GCKP35557 465 aa10.19□□□□□ -0.78
SMARCE1-207ENST00000469334 APBA1Q02410 837 aa10.19□□□□□ -0.78
SMARCE1-207ENST00000469334 MTF1Q14872 753 aa10.19□□□□□ -0.78
SMARCE1-207ENST00000469334 NR1I3Q14994 352 aa10.19□□□□□ -0.78
SMARCE1-207ENST00000469334 PDCD2Q16342 344 aaPredicted RBP10.19□□□□□ -0.78
SMARCE1-207ENST00000469334 FILIP1LQ4L180 1135 aa10.19□□□□□ -0.78
SMARCE1-207ENST00000469334 SULT6B1Q6IMI4 303 aa10.19□□□□□ -0.78
SMARCE1-207ENST00000469334 CCNI2Q6ZMN8 369 aaPredicted RBP10.19□□□□□ -0.78
SMARCE1-207ENST00000469334 TMTC1Q8IUR5 882 aa10.19□□□□□ -0.78
SMARCE1-207ENST00000469334 ANKRD24Q8TF21 1146 aa10.19□□□□□ -0.78
SMARCE1-207ENST00000469334 AENQ8WTP8 325 aaKnown RBP10.19□□□□□ -0.78
SMARCE1-207ENST00000469334 RIN2Q8WYP3 895 aaPredicted RBP10.19□□□□□ -0.78
SMARCE1-207ENST00000469334 EPN3Q9H201 632 aa10.19□□□□□ -0.78
SMARCE1-207ENST00000469334 BABAM1Q9NWV8 329 aa10.19□□□□□ -0.78
SMARCE1-207ENST00000469334 SAMM50Q9Y512 469 aa10.19□□□□□ -0.78
SMARCE1-207ENST00000469334 SNUPNO95149 360 aaKnown RBP10.19□□□□□ -0.78
SMARCE1-207ENST00000469334 IPO7O95373 1038 aaKnown RBP10.19□□□□□ -0.78
SMARCE1-207ENST00000469334 PRPHP41219 470 aa10.19□□□□□ -0.78
SMARCE1-207ENST00000469334 HSP90AB2PQ58FF8 381 aa10.19□□□□□ -0.78
SMARCE1-207ENST00000469334 MYSM1Q5VVJ2 828 aa10.19□□□□□ -0.78
SMARCE1-207ENST00000469334 CDCA2Q69YH5 1023 aaPredicted RBP10.19□□□□□ -0.78
SMARCE1-207ENST00000469334 KDM7AQ6ZMT4 941 aa10.19□□□□□ -0.78
SMARCE1-207ENST00000469334 MLKLQ8NB16 471 aa10.19□□□□□ -0.78
SMARCE1-207ENST00000469334 P3H4Q92791 437 aa10.19□□□□□ -0.78
SMARCE1-207ENST00000469334 ZNF274Q96GC6 653 aaPredicted RBP10.19□□□□□ -0.78
SMARCE1-207ENST00000469334 FSD1Q9BTV5 496 aa10.19□□□□□ -0.78
SMARCE1-207ENST00000469334 CPSF2Q9P2I0 782 aaKnown RBP10.19□□□□□ -0.78
SMARCE1-207ENST00000469334 TAOK2Q9UL54 1235 aa10.19□□□□□ -0.78
SMARCE1-207ENST00000469334 CLIC4Q9Y696 253 aa10.19□□□□□ -0.78
SMARCE1-207ENST00000469334 ITIH6Q6UXX5 1313 aa10.18□□□□□ -0.78
SMARCE1-207ENST00000469334 PSMD14O00487 310 aa10.18□□□□□ -0.78
SMARCE1-207ENST00000469334 MFAP3LO75121 409 aa10.18□□□□□ -0.78
SMARCE1-207ENST00000469334 PPP6R2O75170 966 aa10.18□□□□□ -0.78
SMARCE1-207ENST00000469334 NAA35Q5VZE5 725 aa10.18□□□□□ -0.78
SMARCE1-207ENST00000469334 ANO1Q5XXA6 986 aa10.18□□□□□ -0.78
SMARCE1-207ENST00000469334 SYNE3Q6ZMZ3 975 aa10.18□□□□□ -0.78
SMARCE1-207ENST00000469334 FAM43BQ6ZT52 329 aaPredicted RBP10.18□□□□□ -0.78
SMARCE1-207ENST00000469334 TRIML1Q8N9V2 468 aa10.18□□□□□ -0.78
SMARCE1-207ENST00000469334 RUFY1Q96T51 708 aa10.18□□□□□ -0.78
SMARCE1-207ENST00000469334 NUCKS1Q9H1E3 243 aaKnown RBP10.18□□□□□ -0.78
SMARCE1-207ENST00000469334 TAF6LQ9Y6J9 622 aa10.18□□□□□ -0.78
SMARCE1-207ENST00000469334 MRC1P22897 1456 aa10.18□□□□□ -0.78
SMARCE1-207ENST00000469334 MROH7-TTC4A0A0A0MT08 1334 aa10.18□□□□□ -0.78
SMARCE1-207ENST00000469334 RIMBP3CA6NJZ7 1639 aa10.18□□□□□ -0.78
SMARCE1-207ENST00000469334 RIMBP3BA6NNM3 1639 aa10.18□□□□□ -0.78
SMARCE1-207ENST00000469334 RIMBP3Q9UFD9 1639 aa10.18□□□□□ -0.78
SMARCE1-207ENST00000469334 ATP5JP18859 108 aa10.18□□□□□ -0.78
SMARCE1-207ENST00000469334 GBP2P32456 591 aaPredicted RBP10.18□□□□□ -0.78
SMARCE1-207ENST00000469334 EIF4A2Q14240 407 aaKnown RBP10.18□□□□□ -0.78
SMARCE1-207ENST00000469334 NAA25Q14CX7 972 aa10.18□□□□□ -0.78
SMARCE1-207ENST00000469334 CYB5D1Q6P9G0 228 aa10.18□□□□□ -0.78
SMARCE1-207ENST00000469334 DHX32Q7L7V1 743 aaKnown RBP10.18□□□□□ -0.78
SMARCE1-207ENST00000469334 C1orf131Q8NDD1 294 aaKnown RBP10.18□□□□□ -0.78
SMARCE1-207ENST00000469334 WWC3Q9ULE0 1092 aa10.18□□□□□ -0.78
SMARCE1-207ENST00000469334 TMEM131LA2VDJ0 1609 aa10.17□□□□□ -0.78
SMARCE1-207ENST00000469334 ALKQ9UM73 1620 aa10.17□□□□□ -0.78
SMARCE1-207ENST00000469334 SLC39A14Q15043 492 aa10.17□□□□□ -0.78
SMARCE1-207ENST00000469334 NCAPH2Q6IBW4 605 aa10.17□□□□□ -0.78
SMARCE1-207ENST00000469334 CCDC121Q6ZUS5 278 aa10.17□□□□□ -0.78
SMARCE1-207ENST00000469334 WAPLQ7Z5K2 1190 aa10.17□□□□□ -0.78
SMARCE1-207ENST00000469334 CEP57Q86XR8 500 aa10.17□□□□□ -0.78
SMARCE1-207ENST00000469334 EHBP1Q8NDI1 1231 aa10.17□□□□□ -0.78
SMARCE1-207ENST00000469334 ZNF473Q8WTR7 871 aaKnown RBP10.17□□□□□ -0.78
SMARCE1-207ENST00000469334 SAAL1Q96ER3 474 aa10.17□□□□□ -0.78
SMARCE1-207ENST00000469334 CTAGE1Q96RT6 745 aa10.17□□□□□ -0.78
SMARCE1-207ENST00000469334 CDC5LQ99459 802 aaKnown RBP10.17□□□□□ -0.78
SMARCE1-207ENST00000469334 EHD4Q9H223 541 aa10.17□□□□□ -0.78
SMARCE1-207ENST00000469334 NFE2L3Q9Y4A8 694 aa10.17□□□□□ -0.78
SMARCE1-207ENST00000469334 DDX60Q8IY21 1712 aaKnown RBP10.17□□□□□ -0.78
SMARCE1-207ENST00000469334 PEAK1Q9H792 1746 aa10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 LIN7AO14910 233 aaPredicted RBP10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 SEMA3EO15041 775 aa10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 MYBL2P10244 700 aa10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 PBX1P40424 430 aa10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 FOSBP53539 338 aa10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 ITIH3Q06033 890 aa10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 NNTQ13423 1086 aa10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 TRIM14Q14142 442 aa10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 RNF187Q5TA31 235 aaPredicted RBP10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 PAPD7Q5XG87 772 aaKnown RBP10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 CCDC102BQ68D86 513 aa10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 EMBQ6PCB8 327 aa10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 C6orf89Q6UWU4 347 aa10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 TTLL7Q6ZT98 887 aa10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 AACSQ86V21 672 aa10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 FUKQ8N0W3 1084 aa10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 MICAL1Q8TDZ2 1067 aa10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 CCDC114Q96M63 670 aa10.16□□□□□ -0.78
SMARCE1-207ENST00000469334 TMX4Q9H1E5 349 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms