RNA–Protein interactions for RNA: ENST00000468958.1

ABCF1-204, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-204ENST00000468958 RWDD1Q9H446 243 aaPredicted RBP15.28■□□□□ 0.04
ABCF1-204ENST00000468958 DNAJC18Q9H819 358 aa15.28■□□□□ 0.04
ABCF1-204ENST00000468958 KCNH4Q9UQ05 1017 aa15.28■□□□□ 0.04
ABCF1-204ENST00000468958 MAP4K4O95819 1239 aaPredicted RBP15.27■□□□□ 0.04
ABCF1-204ENST00000468958 IFIT2P09913 472 aaKnown RBP15.27■□□□□ 0.04
ABCF1-204ENST00000468958 PTPRAP18433 802 aa15.27■□□□□ 0.04
ABCF1-204ENST00000468958 JAG1P78504 1218 aa15.27■□□□□ 0.04
ABCF1-204ENST00000468958 HDAC1Q13547 482 aaPredicted RBP15.27■□□□□ 0.04
ABCF1-204ENST00000468958 SHROOM1Q2M3G4 852 aaPredicted RBP15.27■□□□□ 0.04
ABCF1-204ENST00000468958 SCYL3Q8IZE3 742 aa15.27■□□□□ 0.04
ABCF1-204ENST00000468958 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.27■□□□□ 0.04
ABCF1-204ENST00000468958 GCC1Q96CN9 775 aa15.27■□□□□ 0.04
ABCF1-204ENST00000468958 DCTPP1Q9H773 170 aa15.27■□□□□ 0.04
ABCF1-204ENST00000468958 HTTP42858 3142 aa15.27■□□□□ 0.03
ABCF1-204ENST00000468958 CCDC85CA6NKD9 419 aa15.26■□□□□ 0.03
ABCF1-204ENST00000468958 GOLIM4O00461 696 aa15.26■□□□□ 0.03
ABCF1-204ENST00000468958 TBC1D12O60347 775 aa15.26■□□□□ 0.03
ABCF1-204ENST00000468958 CETPP11597 493 aa15.26■□□□□ 0.03
ABCF1-204ENST00000468958 SNAPC2Q13487 334 aa15.26■□□□□ 0.03
ABCF1-204ENST00000468958 TAF1CQ15572 869 aaPredicted RBP15.26■□□□□ 0.03
ABCF1-204ENST00000468958 SLC4A8Q2Y0W8 1093 aa15.26■□□□□ 0.03
ABCF1-204ENST00000468958 EXOC6Q8TAG9 804 aa15.26■□□□□ 0.03
ABCF1-204ENST00000468958 CD99L2Q8TCZ2 262 aa15.26■□□□□ 0.03
ABCF1-204ENST00000468958 DNAJC2Q99543 621 aaKnown RBP15.26■□□□□ 0.03
ABCF1-204ENST00000468958 RIOK1Q9BRS2 568 aaKnown RBP15.26■□□□□ 0.03
ABCF1-204ENST00000468958 LRRCC1Q9C099 1032 aa15.26■□□□□ 0.03
ABCF1-204ENST00000468958 BOLA2Q9H3K6 86 aa15.26■□□□□ 0.03
ABCF1-204ENST00000468958 TCRBV5S4A2TA0A5A2 114 aa15.25■□□□□ 0.03
ABCF1-204ENST00000468958 BAG3O95817 575 aa15.25■□□□□ 0.03
ABCF1-204ENST00000468958 PDE6AP16499 860 aa15.25■□□□□ 0.03
ABCF1-204ENST00000468958 EVX2Q03828 476 aa15.25■□□□□ 0.03
ABCF1-204ENST00000468958 GPAT2Q6NUI2 795 aa15.25■□□□□ 0.03
ABCF1-204ENST00000468958 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.25■□□□□ 0.03
ABCF1-204ENST00000468958 SAP30BPQ9UHR5 308 aaKnown RBP15.25■□□□□ 0.03
ABCF1-204ENST00000468958 PALD1Q9ULE6 856 aa15.25■□□□□ 0.03
ABCF1-204ENST00000468958 AFG3L2Q9Y4W6 797 aa15.25■□□□□ 0.03
ABCF1-204ENST00000468958 ZHX2Q9Y6X8 837 aa15.25■□□□□ 0.03
ABCF1-204ENST00000468958 ADGRA2Q96PE1 1338 aa15.24■□□□□ 0.03
ABCF1-204ENST00000468958 CTNND1O60716 968 aaKnown RBP15.24■□□□□ 0.03
ABCF1-204ENST00000468958 IGSF3O75054 1194 aa15.24■□□□□ 0.03
ABCF1-204ENST00000468958 ATP5JP18859 108 aa15.24■□□□□ 0.03
ABCF1-204ENST00000468958 OTUD7BQ6GQQ9 843 aa15.24■□□□□ 0.03
ABCF1-204ENST00000468958 NOL10Q9BSC4 688 aaKnown RBP15.24■□□□□ 0.03
ABCF1-204ENST00000468958 HPS5Q9UPZ3 1129 aa15.24■□□□□ 0.03
ABCF1-204ENST00000468958 CENPFP49454 3210 aa15.23■□□□□ 0.03
ABCF1-204ENST00000468958 ZNF532Q9HCE3 1301 aa15.23■□□□□ 0.03
ABCF1-204ENST00000468958 A0A0G2JLL6 359 aaPredicted RBP15.23■□□□□ 0.03
ABCF1-204ENST00000468958 PLCG2P16885 1265 aa15.23■□□□□ 0.03
ABCF1-204ENST00000468958 MAP3K12Q12852 859 aa15.23■□□□□ 0.03
ABCF1-204ENST00000468958 TSHZ3Q63HK5 1081 aa15.23■□□□□ 0.03
ABCF1-204ENST00000468958 OTOP1Q7RTM1 612 aa15.23■□□□□ 0.03
ABCF1-204ENST00000468958 PRRT2Q7Z6L0 340 aaPredicted RBP15.23■□□□□ 0.03
ABCF1-204ENST00000468958 METTL16Q86W50 562 aaKnown RBP15.23■□□□□ 0.03
ABCF1-204ENST00000468958 GPATCH3Q96I76 525 aa15.23■□□□□ 0.03
ABCF1-204ENST00000468958 HAUS7Q99871 368 aa15.23■□□□□ 0.03
ABCF1-204ENST00000468958 PAG1Q9NWQ8 432 aa15.23■□□□□ 0.03
ABCF1-204ENST00000468958 RBBP6Q7Z6E9 1792 aaKnown RBP15.23■□□□□ 0.03
ABCF1-204ENST00000468958 CTGFP29279 349 aa15.22■□□□□ 0.03
ABCF1-204ENST00000468958 CAP2P40123 477 aa15.22■□□□□ 0.03
ABCF1-204ENST00000468958 SP3Q02447 781 aa15.22■□□□□ 0.03
ABCF1-204ENST00000468958 SLC9C2Q5TAH2 1124 aa15.22■□□□□ 0.03
ABCF1-204ENST00000468958 ANKRD23Q86SG2 305 aa15.22■□□□□ 0.03
ABCF1-204ENST00000468958 LCORLQ8N3X6 602 aa15.22■□□□□ 0.03
ABCF1-204ENST00000468958 ARHGAP39Q9C0H5 1083 aa15.22■□□□□ 0.03
ABCF1-204ENST00000468958 ZFYVE28Q9HCC9 887 aa15.22■□□□□ 0.03
ABCF1-204ENST00000468958 PICK1Q9NRD5 415 aa15.22■□□□□ 0.03
ABCF1-204ENST00000468958 PI4KBQ9UBF8 816 aa15.22■□□□□ 0.03
ABCF1-204ENST00000468958 TRIM17Q9Y577 477 aa15.22■□□□□ 0.03
ABCF1-204ENST00000468958 PDHXO00330 501 aa15.21■□□□□ 0.03
ABCF1-204ENST00000468958 CXCL11O14625 94 aa15.21■□□□□ 0.03
ABCF1-204ENST00000468958 TLR2O60603 784 aa15.21■□□□□ 0.03
ABCF1-204ENST00000468958 ADD2P35612 726 aa15.21■□□□□ 0.03
ABCF1-204ENST00000468958 TTF1Q15361 905 aaPredicted RBP15.21■□□□□ 0.03
ABCF1-204ENST00000468958 FBXO46Q6PJ61 603 aaPredicted RBP15.21■□□□□ 0.03
ABCF1-204ENST00000468958 OTUD7AQ8TE49 926 aaPredicted RBP15.21■□□□□ 0.03
ABCF1-204ENST00000468958 ZCCHC17Q9NP64 241 aaKnown RBP15.21■□□□□ 0.03
ABCF1-204ENST00000468958 HERC5Q9UII4 1024 aaKnown RBP15.21■□□□□ 0.03
ABCF1-204ENST00000468958 BRCA2P51587 3418 aa15.2■□□□□ 0.02
ABCF1-204ENST00000468958 TRIM75PA6NK02 468 aa15.2■□□□□ 0.02
ABCF1-204ENST00000468958 CYP2C8P10632 490 aa15.2■□□□□ 0.02
ABCF1-204ENST00000468958 PLCD1P51178 756 aa15.2■□□□□ 0.02
ABCF1-204ENST00000468958 IRX6P78412 446 aaPredicted RBP15.2■□□□□ 0.02
ABCF1-204ENST00000468958 C17orf99Q6UX52 265 aa15.2■□□□□ 0.02
ABCF1-204ENST00000468958 SDR42E1Q8WUS8 393 aa15.2■□□□□ 0.02
ABCF1-204ENST00000468958 DHX36Q9H2U1 1008 aaKnown RBP15.2■□□□□ 0.02
ABCF1-204ENST00000468958 CPA4Q9UI42 421 aa15.2■□□□□ 0.02
ABCF1-204ENST00000468958 DOCK3Q8IZD9 2030 aa15.19■□□□□ 0.02
ABCF1-204ENST00000468958 MAGEB6P1A0A0J9YX57 407 aa15.19■□□□□ 0.02
ABCF1-204ENST00000468958 SMIM22K7EJ46 135 aa15.19■□□□□ 0.02
ABCF1-204ENST00000468958 ECM2O94769 699 aaPredicted RBP15.19■□□□□ 0.02
ABCF1-204ENST00000468958 GDF11O95390 407 aa15.19■□□□□ 0.02
ABCF1-204ENST00000468958 USP5P45974 858 aa15.19■□□□□ 0.02
ABCF1-204ENST00000468958 SOX10P56693 466 aa15.19■□□□□ 0.02
ABCF1-204ENST00000468958 PKN2Q16513 984 aaKnown RBP15.19■□□□□ 0.02
ABCF1-204ENST00000468958 TREML2Q5T2D2 321 aa15.19■□□□□ 0.02
ABCF1-204ENST00000468958 ERICH6BQ5W0A0 696 aa15.19■□□□□ 0.02
ABCF1-204ENST00000468958 GADL1Q6ZQY3 521 aa15.19■□□□□ 0.02
ABCF1-204ENST00000468958 ERO1AQ96HE7 468 aa15.19■□□□□ 0.02
ABCF1-204ENST00000468958 ARMT1Q9H993 441 aa15.19■□□□□ 0.02
ABCF1-204ENST00000468958 PLXNB2O15031 1838 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms