RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 RNF41Q9H4P4 317 aaPredicted RBP20.72■□□□□ 0.91
RPL39-202ENST00000468844 GREB1LQ9C091 1923 aaPredicted RBP20.72■□□□□ 0.91
RPL39-202ENST00000468844 B4E1Z4 1266 aa20.72■□□□□ 0.91
RPL39-202ENST00000468844 PRDM1O75626 825 aa20.72■□□□□ 0.91
RPL39-202ENST00000468844 TRDNQ13061 729 aa20.72■□□□□ 0.91
RPL39-202ENST00000468844 RALYLQ86SE5 291 aaKnown RBP20.72■□□□□ 0.91
RPL39-202ENST00000468844 HACL1Q9UJ83 578 aa20.72■□□□□ 0.91
RPL39-202ENST00000468844 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.72■□□□□ 0.91
RPL39-202ENST00000468844 HMGB1P09429 215 aaKnown RBP20.71■□□□□ 0.91
RPL39-202ENST00000468844 TTC6Q86TZ1 520 aa20.71■□□□□ 0.91
RPL39-202ENST00000468844 DHX36Q9H2U1 1008 aaKnown RBP20.71■□□□□ 0.91
RPL39-202ENST00000468844 CNNM2Q9H8M5 875 aa20.71■□□□□ 0.91
RPL39-202ENST00000468844 ADARB2Q9NS39 739 aaKnown RBP20.71■□□□□ 0.91
RPL39-202ENST00000468844 SCAF8Q9UPN6 1271 aaKnown RBP20.71■□□□□ 0.91
RPL39-202ENST00000468844 ATAD5Q96QE3 1844 aa20.71■□□□□ 0.91
RPL39-202ENST00000468844 ST18O60284 1047 aa20.7■□□□□ 0.91
RPL39-202ENST00000468844 SLC3A2P08195 630 aaKnown RBP20.7■□□□□ 0.91
RPL39-202ENST00000468844 DHX32Q7L7V1 743 aaKnown RBP20.7■□□□□ 0.91
RPL39-202ENST00000468844 CHST3Q7LGC8 479 aa20.7■□□□□ 0.91
RPL39-202ENST00000468844 FAM83AQ86UY5 434 aa20.7■□□□□ 0.91
RPL39-202ENST00000468844 SLC44A5Q8NCS7 719 aa20.7■□□□□ 0.91
RPL39-202ENST00000468844 FAM151AQ8WW52 585 aa20.7■□□□□ 0.91
RPL39-202ENST00000468844 TOMM22Q9NS69 142 aa20.7■□□□□ 0.91
RPL39-202ENST00000468844 MYH4Q9Y623 1939 aa20.7■□□□□ 0.9
RPL39-202ENST00000468844 PCP11498 1178 aaKnown RBP20.7■□□□□ 0.9
RPL39-202ENST00000468844 EXOSC10Q01780 885 aaKnown RBP20.7■□□□□ 0.9
RPL39-202ENST00000468844 GABPAQ06546 454 aa20.7■□□□□ 0.9
RPL39-202ENST00000468844 PDE4BQ07343 736 aa20.7■□□□□ 0.9
RPL39-202ENST00000468844 RRP12Q5JTH9 1297 aaKnown RBP20.7■□□□□ 0.9
RPL39-202ENST00000468844 C16orf86Q6ZW13 317 aa20.7■□□□□ 0.9
RPL39-202ENST00000468844 KRT23Q9C075 422 aa20.7■□□□□ 0.9
RPL39-202ENST00000468844 DCAF8L1A6NGE4 600 aa20.69■□□□□ 0.9
RPL39-202ENST00000468844 KDM4AO75164 1064 aa20.69■□□□□ 0.9
RPL39-202ENST00000468844 ANTXR2P58335 489 aa20.69■□□□□ 0.9
RPL39-202ENST00000468844 CYB5R4Q7L1T6 521 aa20.69■□□□□ 0.9
RPL39-202ENST00000468844 ZSCAN29Q8IWY8 852 aaPredicted RBP20.69■□□□□ 0.9
RPL39-202ENST00000468844 LRRC2Q9BYS8 371 aa20.69■□□□□ 0.9
RPL39-202ENST00000468844 TMEM39BQ9GZU3 492 aa20.69■□□□□ 0.9
RPL39-202ENST00000468844 SERPINB13Q9UIV8 391 aa20.69■□□□□ 0.9
RPL39-202ENST00000468844 ORC4O43929 436 aa20.68■□□□□ 0.9
RPL39-202ENST00000468844 HLA-DOAP06340 250 aa20.68■□□□□ 0.9
RPL39-202ENST00000468844 SLURP2P0DP57 97 aa20.68■□□□□ 0.9
RPL39-202ENST00000468844 MCM5P33992 734 aa20.68■□□□□ 0.9
RPL39-202ENST00000468844 ANGEL2Q5VTE6 544 aaKnown RBP20.68■□□□□ 0.9
RPL39-202ENST00000468844 CDAN1Q8IWY9 1227 aa20.68■□□□□ 0.9
RPL39-202ENST00000468844 SNX21Q969T3 373 aa20.68■□□□□ 0.9
RPL39-202ENST00000468844 EHD4Q9H223 541 aa20.68■□□□□ 0.9
RPL39-202ENST00000468844 PDRG1Q9NUG6 133 aa20.68■□□□□ 0.9
RPL39-202ENST00000468844 AK2P54819 239 aa20.68■□□□□ 0.9
RPL39-202ENST00000468844 CSRNP1Q96S65 589 aa20.68■□□□□ 0.9
RPL39-202ENST00000468844 TBC1D2Q9BYX2 928 aa20.68■□□□□ 0.9
RPL39-202ENST00000468844 ZSWIM5Q9P217 1185 aa20.68■□□□□ 0.9
RPL39-202ENST00000468844 PI4KBQ9UBF8 816 aa20.68■□□□□ 0.9
RPL39-202ENST00000468844 POTECB2RU33 542 aa20.67■□□□□ 0.9
RPL39-202ENST00000468844 CDK8P49336 464 aa20.67■□□□□ 0.9
RPL39-202ENST00000468844 TNFAIP1Q13829 316 aa20.67■□□□□ 0.9
RPL39-202ENST00000468844 IL27Q8NEV9 243 aa20.67■□□□□ 0.9
RPL39-202ENST00000468844 DNAJC18Q9H819 358 aa20.67■□□□□ 0.9
RPL39-202ENST00000468844 GGA3Q9NZ52 723 aa20.67■□□□□ 0.9
RPL39-202ENST00000468844 PGAP2Q9UHJ9 254 aa20.67■□□□□ 0.9
RPL39-202ENST00000468844 PRC1O43663 620 aa20.66■□□□□ 0.9
RPL39-202ENST00000468844 TNNI2P48788 182 aa20.66■□□□□ 0.9
RPL39-202ENST00000468844 RASA3Q14644 834 aa20.66■□□□□ 0.9
RPL39-202ENST00000468844 ESR2Q92731 530 aa20.66■□□□□ 0.9
RPL39-202ENST00000468844 RANBP6O60518 1105 aaKnown RBP20.66■□□□□ 0.9
RPL39-202ENST00000468844 EPHX2P34913 555 aa20.66■□□□□ 0.9
RPL39-202ENST00000468844 TOB2Q14106 344 aaPredicted RBP20.66■□□□□ 0.9
RPL39-202ENST00000468844 Q6ZUG5 572 aa20.66■□□□□ 0.9
RPL39-202ENST00000468844 ALDH8A1Q9H2A2 487 aaPredicted RBP20.66■□□□□ 0.9
RPL39-202ENST00000468844 MKNK2Q9HBH9 465 aa20.66■□□□□ 0.9
RPL39-202ENST00000468844 WDR19Q8NEZ3 1342 aa20.66■□□□□ 0.9
RPL39-202ENST00000468844 RASA1P20936 1047 aa20.65■□□□□ 0.9
RPL39-202ENST00000468844 NOL8Q76FK4 1167 aaKnown RBP20.65■□□□□ 0.9
RPL39-202ENST00000468844 METTL16Q86W50 562 aaKnown RBP20.65■□□□□ 0.9
RPL39-202ENST00000468844 TEPSINQ96N21 525 aa20.65■□□□□ 0.9
RPL39-202ENST00000468844 AGXT2Q9BYV1 514 aa20.65■□□□□ 0.9
RPL39-202ENST00000468844 IQCA1LA6NCM1 817 aa20.65■□□□□ 0.9
RPL39-202ENST00000468844 FAM196BA6NMK8 535 aa20.65■□□□□ 0.9
RPL39-202ENST00000468844 APOBEC3FQ8IUX4 373 aaKnown RBP20.65■□□□□ 0.9
RPL39-202ENST00000468844 DEFB129Q9H1M3 183 aa20.65■□□□□ 0.9
RPL39-202ENST00000468844 ZNF287Q9HBT7 754 aa20.65■□□□□ 0.9
RPL39-202ENST00000468844 SHMT1P34896 483 aa20.64■□□□□ 0.89
RPL39-202ENST00000468844 FAM47AQ5JRC9 791 aa20.64■□□□□ 0.89
RPL39-202ENST00000468844 USP50Q70EL3 339 aaPredicted RBP20.64■□□□□ 0.89
RPL39-202ENST00000468844 HSCBQ8IWL3 235 aa20.64■□□□□ 0.89
RPL39-202ENST00000468844 FBXL16Q8N461 479 aa20.64■□□□□ 0.89
RPL39-202ENST00000468844 ZKSCAN3Q9BRR0 538 aa20.64■□□□□ 0.89
RPL39-202ENST00000468844 LARP6Q9BRS8 491 aaKnown RBP20.64■□□□□ 0.89
RPL39-202ENST00000468844 TAF1DQ9H5J8 278 aaPredicted RBP20.64■□□□□ 0.89
RPL39-202ENST00000468844 GPHNQ9NQX3 736 aaPredicted RBP20.64■□□□□ 0.89
RPL39-202ENST00000468844 SWAP70Q9UH65 585 aa20.64■□□□□ 0.89
RPL39-202ENST00000468844 PITPNM2Q9BZ72 1349 aa20.64■□□□□ 0.89
RPL39-202ENST00000468844 FOXP4Q8IVH2 680 aaPredicted RBP20.63■□□□□ 0.89
RPL39-202ENST00000468844 CRACR2BQ8N4Y2 399 aaPredicted RBP20.63■□□□□ 0.89
RPL39-202ENST00000468844 TSPY2A6NKD2 308 aa20.63■□□□□ 0.89
RPL39-202ENST00000468844 BRF1Q92994 677 aa20.63■□□□□ 0.89
RPL39-202ENST00000468844 K7ELQ4 463 aaPredicted RBP20.62■□□□□ 0.89
RPL39-202ENST00000468844 MCM2P49736 904 aa20.62■□□□□ 0.89
RPL39-202ENST00000468844 NT5C2P49902 561 aa20.62■□□□□ 0.89
RPL39-202ENST00000468844 FGD1P98174 961 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms