RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 TOP6BLQ8N6T0 577 aa6.75□□□□□ -1.33
GPNMB-207ENST00000468723 KIAA1324LA8MWY0 1029 aaPredicted RBP6.74□□□□□ -1.33
GPNMB-207ENST00000468723 MINDY4BA8MYZ0 360 aa6.74□□□□□ -1.33
GPNMB-207ENST00000468723 ADAMTS4O75173 837 aa6.74□□□□□ -1.33
GPNMB-207ENST00000468723 RLBP1P12271 317 aa6.74□□□□□ -1.33
GPNMB-207ENST00000468723 GBP2P32456 591 aaPredicted RBP6.74□□□□□ -1.33
GPNMB-207ENST00000468723 ETF1P62495 437 aaKnown RBP6.74□□□□□ -1.33
GPNMB-207ENST00000468723 CYP27C1Q4G0S4 372 aa6.74□□□□□ -1.33
GPNMB-207ENST00000468723 RELL1Q8IUW5 271 aa6.74□□□□□ -1.33
GPNMB-207ENST00000468723 ZNF507Q8TCN5 953 aa6.74□□□□□ -1.33
GPNMB-207ENST00000468723 DUSP23Q9BVJ7 150 aa6.74□□□□□ -1.33
GPNMB-207ENST00000468723 FBRSQ9HAH7 460 aa6.74□□□□□ -1.33
GPNMB-207ENST00000468723 ZC3H7BQ9UGR2 993 aaKnown RBP6.74□□□□□ -1.33
GPNMB-207ENST00000468723 CCDC9Q9Y3X0 531 aaKnown RBP6.74□□□□□ -1.33
GPNMB-207ENST00000468723 SNCAIPQ9Y6H5 919 aa6.74□□□□□ -1.33
GPNMB-207ENST00000468723 PF4P02776 101 aa6.73□□□□□ -1.33
GPNMB-207ENST00000468723 SPINK2P20155 84 aa6.73□□□□□ -1.33
GPNMB-207ENST00000468723 GRK4P32298 578 aa6.73□□□□□ -1.33
GPNMB-207ENST00000468723 ITGAEP38570 1179 aa6.73□□□□□ -1.33
GPNMB-207ENST00000468723 FAM160A1Q05DH4 1040 aa6.73□□□□□ -1.33
GPNMB-207ENST00000468723 CPSF6Q16630 551 aaKnown RBP eCLIP6.73□□□□□ -1.33
GPNMB-207ENST00000468723 BNC2Q6ZN30 1099 aaPredicted RBP6.73□□□□□ -1.33
GPNMB-207ENST00000468723 DTX1Q86Y01 620 aa6.73□□□□□ -1.33
GPNMB-207ENST00000468723 FAM181AQ8N9Y4 354 aa6.73□□□□□ -1.33
GPNMB-207ENST00000468723 PSMG3-AS1Q96PY0 264 aa6.73□□□□□ -1.33
GPNMB-207ENST00000468723 WNT10AQ9GZT5 417 aa6.73□□□□□ -1.33
GPNMB-207ENST00000468723 COPRSQ9NQ92 184 aa6.73□□□□□ -1.33
GPNMB-207ENST00000468723 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.72□□□□□ -1.33
GPNMB-207ENST00000468723 GFRA2O00451 464 aa6.72□□□□□ -1.33
GPNMB-207ENST00000468723 CAMK2GQ13555 558 aaPredicted RBP6.72□□□□□ -1.33
GPNMB-207ENST00000468723 MRPL58Q14197 206 aaKnown RBP6.72□□□□□ -1.33
GPNMB-207ENST00000468723 NKG7Q16617 165 aa6.72□□□□□ -1.33
GPNMB-207ENST00000468723 MSMPQ1L6U9 139 aa6.72□□□□□ -1.33
GPNMB-207ENST00000468723 TSNAXIP1Q2TAA8 658 aa6.72□□□□□ -1.33
GPNMB-207ENST00000468723 TMEM74Q96NL1 305 aa6.72□□□□□ -1.33
GPNMB-207ENST00000468723 U3KQE9 123 aa6.72□□□□□ -1.33
GPNMB-207ENST00000468723 ARMCX6Q7L4S7 300 aa6.71□□□□□ -1.34
GPNMB-207ENST00000468723 TMEM87AQ8NBN3 555 aa6.71□□□□□ -1.34
GPNMB-207ENST00000468723 KCT2Q8NC54 265 aa6.71□□□□□ -1.34
GPNMB-207ENST00000468723 XAGE3Q8WTP9 111 aa6.71□□□□□ -1.34
GPNMB-207ENST00000468723 RSRP1Q9BUV0 290 aa6.71□□□□□ -1.34
GPNMB-207ENST00000468723 BCL11AQ9H165 835 aa6.71□□□□□ -1.34
GPNMB-207ENST00000468723 PRDM10Q9NQV6 1147 aa6.71□□□□□ -1.34
GPNMB-207ENST00000468723 KBTBD4Q9NVX7 518 aa6.71□□□□□ -1.34
GPNMB-207ENST00000468723 WNT11O96014 354 aa6.7□□□□□ -1.34
GPNMB-207ENST00000468723 F13A1P00488 732 aa6.7□□□□□ -1.34
GPNMB-207ENST00000468723 RPL6Q02878 288 aaKnown RBP6.7□□□□□ -1.34
GPNMB-207ENST00000468723 LMNB2Q03252 620 aa6.7□□□□□ -1.34
GPNMB-207ENST00000468723 ARHGAP27Q6ZUM4 889 aa6.7□□□□□ -1.34
GPNMB-207ENST00000468723 RBAK-RBAKDNI3L0D1 243 aa6.69□□□□□ -1.34
GPNMB-207ENST00000468723 PGRP06401 933 aa6.69□□□□□ -1.34
GPNMB-207ENST00000468723 GP2P55259 537 aaKnown RBP6.69□□□□□ -1.34
GPNMB-207ENST00000468723 SLBPQ14493 270 aaKnown RBP eCLIP6.69□□□□□ -1.34
GPNMB-207ENST00000468723 HID1Q8IV36 788 aa6.69□□□□□ -1.34
GPNMB-207ENST00000468723 PLD6Q8N2A8 252 aaKnown RBP6.69□□□□□ -1.34
GPNMB-207ENST00000468723 GOLM1Q8NBJ4 401 aa6.69□□□□□ -1.34
GPNMB-207ENST00000468723 RHOVQ96L33 236 aa6.69□□□□□ -1.34
GPNMB-207ENST00000468723 HEXIM2Q96MH2 286 aaKnown RBP6.69□□□□□ -1.34
GPNMB-207ENST00000468723 DPH2Q9BQC3 489 aaPredicted RBP6.69□□□□□ -1.34
GPNMB-207ENST00000468723 KRTAP9-2Q9BYQ4 174 aa6.69□□□□□ -1.34
GPNMB-207ENST00000468723 FOXQ1Q9C009 403 aa6.69□□□□□ -1.34
GPNMB-207ENST00000468723 CCDC39Q9UFE4 941 aa6.69□□□□□ -1.34
GPNMB-207ENST00000468723 GGT7Q9UJ14 662 aa6.69□□□□□ -1.34
GPNMB-207ENST00000468723 ANGEL1Q9UNK9 670 aaKnown RBP6.69□□□□□ -1.34
GPNMB-207ENST00000468723 CORINQ9Y5Q5 1042 aa6.69□□□□□ -1.34
GPNMB-207ENST00000468723 TLR3O15455 904 aaKnown RBP6.68□□□□□ -1.34
GPNMB-207ENST00000468723 LRIG2O94898 1065 aa6.68□□□□□ -1.34
GPNMB-207ENST00000468723 BPNT1O95861 308 aa6.68□□□□□ -1.34
GPNMB-207ENST00000468723 ITIH2P19823 946 aa6.68□□□□□ -1.34
GPNMB-207ENST00000468723 PWP1Q13610 501 aa6.68□□□□□ -1.34
GPNMB-207ENST00000468723 SNAP47Q5SQN1 464 aa6.68□□□□□ -1.34
GPNMB-207ENST00000468723 DIEXFQ68CQ4 756 aaKnown RBP6.68□□□□□ -1.34
GPNMB-207ENST00000468723 GATAD2BQ8WXI9 593 aa6.68□□□□□ -1.34
GPNMB-207ENST00000468723 MIPEPQ99797 713 aa6.68□□□□□ -1.34
GPNMB-207ENST00000468723 BSDC1Q9NW68 430 aaPredicted RBP6.68□□□□□ -1.34
GPNMB-207ENST00000468723 OAS3Q9Y6K5 1087 aaKnown RBP6.68□□□□□ -1.34
GPNMB-207ENST00000468723 FAM221AA4D161 298 aa6.67□□□□□ -1.34
GPNMB-207ENST00000468723 GRIN3BO60391 1043 aa6.67□□□□□ -1.34
GPNMB-207ENST00000468723 CILPO75339 1184 aa6.67□□□□□ -1.34
GPNMB-207ENST00000468723 SLITRK5O94991 958 aa6.67□□□□□ -1.34
GPNMB-207ENST00000468723 EOMESO95936 686 aa6.67□□□□□ -1.34
GPNMB-207ENST00000468723 BNIP3Q12983 259 aa6.67□□□□□ -1.34
GPNMB-207ENST00000468723 LDLRAD1Q5T700 205 aa6.67□□□□□ -1.34
GPNMB-207ENST00000468723 PRAMEF13Q5VWM6 474 aa6.67□□□□□ -1.34
GPNMB-207ENST00000468723 FAM214BQ7L5A3 538 aa6.67□□□□□ -1.34
GPNMB-207ENST00000468723 ERMP1Q7Z2K6 904 aa6.67□□□□□ -1.34
GPNMB-207ENST00000468723 CCDC84Q86UT8 332 aaPredicted RBP6.67□□□□□ -1.34
GPNMB-207ENST00000468723 FBXO27Q8NI29 283 aa6.67□□□□□ -1.34
GPNMB-207ENST00000468723 RIN3Q8TB24 985 aa6.67□□□□□ -1.34
GPNMB-207ENST00000468723 BACH2Q9BYV9 841 aa6.67□□□□□ -1.34
GPNMB-207ENST00000468723 TJP2Q9UDY2 1190 aa6.67□□□□□ -1.34
GPNMB-207ENST00000468723 KRTAP9-6A0A140TA67 174 aa6.66□□□□□ -1.34
GPNMB-207ENST00000468723 RBM47A0AV96 593 aaKnown RBP6.66□□□□□ -1.34
GPNMB-207ENST00000468723 PLCG1P19174 1290 aa6.66□□□□□ -1.34
GPNMB-207ENST00000468723 OXCT1P55809 520 aa6.66□□□□□ -1.34
GPNMB-207ENST00000468723 PDE4BQ07343 736 aa6.66□□□□□ -1.34
GPNMB-207ENST00000468723 FBXL19Q6PCT2 694 aa6.66□□□□□ -1.34
GPNMB-207ENST00000468723 HS2ST1Q7LGA3 356 aa6.66□□□□□ -1.34
GPNMB-207ENST00000468723 NETO1Q8TDF5 533 aa6.66□□□□□ -1.34
GPNMB-207ENST00000468723 TMEM87BQ96K49 555 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms