RNA–Protein interactions for RNA: ENST00000468619.5

SHANK2-214, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 2

Gene SHANK2, Length 2,775 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-214ENST00000468619 IGSF22Q8N9C0 903 aa15.26■□□□□ 0.03
SHANK2-214ENST00000468619 CDC27P30260 824 aa15.26■□□□□ 0.03
SHANK2-214ENST00000468619 DDB1Q16531 1140 aa15.26■□□□□ 0.03
SHANK2-214ENST00000468619 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.26■□□□□ 0.03
SHANK2-214ENST00000468619 THRAP3Q9Y2W1 955 aaKnown RBP15.26■□□□□ 0.03
SHANK2-214ENST00000468619 FAM169AQ9Y6X4 670 aa15.26■□□□□ 0.03
SHANK2-214ENST00000468619 CTAGE15A4D2H0 777 aa15.25■□□□□ 0.03
SHANK2-214ENST00000468619 CTAGE8P0CG41 777 aa15.25■□□□□ 0.03
SHANK2-214ENST00000468619 BRD2P25440 801 aaKnown RBP15.25■□□□□ 0.03
SHANK2-214ENST00000468619 FAM98CQ17RN3 349 aaKnown RBP15.25■□□□□ 0.03
SHANK2-214ENST00000468619 CWF19L2Q2TBE0 894 aaKnown RBP15.25■□□□□ 0.03
SHANK2-214ENST00000468619 SYNE3Q6ZMZ3 975 aa15.25■□□□□ 0.03
SHANK2-214ENST00000468619 CTAGE6Q86UF2 777 aa15.25■□□□□ 0.03
SHANK2-214ENST00000468619 CTAGE4Q8IX94 777 aa15.25■□□□□ 0.03
SHANK2-214ENST00000468619 CPLX3Q8WVH0 158 aa15.25■□□□□ 0.03
SHANK2-214ENST00000468619 SMARCC1Q92922 1105 aaPredicted RBP15.25■□□□□ 0.03
SHANK2-214ENST00000468619 GBP3Q9H0R5 595 aa15.25■□□□□ 0.03
SHANK2-214ENST00000468619 TMOD3Q9NYL9 352 aa15.25■□□□□ 0.03
SHANK2-214ENST00000468619 TUBE1Q9UJT0 475 aa15.25■□□□□ 0.03
SHANK2-214ENST00000468619 SALL1Q9NSC2 1324 aa15.25■□□□□ 0.03
SHANK2-214ENST00000468619 UBR2Q8IWV8 1755 aa15.25■□□□□ 0.03
SHANK2-214ENST00000468619 GLI3P10071 1580 aa15.25■□□□□ 0.03
SHANK2-214ENST00000468619 A0A0G2JLW4 131 aa15.25■□□□□ 0.03
SHANK2-214ENST00000468619 PTCD1O75127 700 aaKnown RBP15.25■□□□□ 0.03
SHANK2-214ENST00000468619 YEATS4O95619 227 aa15.25■□□□□ 0.03
SHANK2-214ENST00000468619 MYSM1Q5VVJ2 828 aa15.25■□□□□ 0.03
SHANK2-214ENST00000468619 RAD9BQ6WBX8 426 aa15.25■□□□□ 0.03
SHANK2-214ENST00000468619 CDC5LQ99459 802 aaKnown RBP15.25■□□□□ 0.03
SHANK2-214ENST00000468619 EHD4Q9H223 541 aa15.25■□□□□ 0.03
SHANK2-214ENST00000468619 POLR3EQ9NVU0 708 aa15.25■□□□□ 0.03
SHANK2-214ENST00000468619 U3KPZ7 1027 aaPredicted RBP15.25■□□□□ 0.03
SHANK2-214ENST00000468619 PAPPAQ13219 1627 aa15.25■□□□□ 0.03
SHANK2-214ENST00000468619 PRPF6O94906 941 aaKnown RBP15.24■□□□□ 0.03
SHANK2-214ENST00000468619 CMA1P23946 247 aa15.24■□□□□ 0.03
SHANK2-214ENST00000468619 PDIA3P30101 505 aaKnown RBP15.24■□□□□ 0.03
SHANK2-214ENST00000468619 PIP4K2AP48426 406 aaPredicted RBP15.24■□□□□ 0.03
SHANK2-214ENST00000468619 AKAP17AQ02040 695 aaKnown RBP15.24■□□□□ 0.03
SHANK2-214ENST00000468619 SLC35F6Q8N357 371 aa15.24■□□□□ 0.03
SHANK2-214ENST00000468619 USP21Q9UK80 565 aa15.24■□□□□ 0.03
SHANK2-214ENST00000468619 ADGRG1Q9Y653 693 aa15.24■□□□□ 0.03
SHANK2-214ENST00000468619 DOT1LQ8TEK3 1739 aa15.24■□□□□ 0.03
SHANK2-214ENST00000468619 CTAGE9A4FU28 777 aa15.24■□□□□ 0.03
SHANK2-214ENST00000468619 ABL1P00519 1130 aa15.24■□□□□ 0.03
SHANK2-214ENST00000468619 C8orf76Q96K31 380 aa15.24■□□□□ 0.03
SHANK2-214ENST00000468619 DBF4Q9UBU7 674 aaPredicted RBP15.24■□□□□ 0.03
SHANK2-214ENST00000468619 A0A0G2JS52 829 aa15.24■□□□□ 0.03
SHANK2-214ENST00000468619 EBAG9O00559 213 aa15.24■□□□□ 0.03
SHANK2-214ENST00000468619 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.24■□□□□ 0.03
SHANK2-214ENST00000468619 RAB11FIP4Q86YS3 637 aa15.24■□□□□ 0.03
SHANK2-214ENST00000468619 FOXP4Q8IVH2 680 aaPredicted RBP15.24■□□□□ 0.03
SHANK2-214ENST00000468619 TRMT44Q8IYL2 757 aaKnown RBP15.24■□□□□ 0.03
SHANK2-214ENST00000468619 FNBP4Q8N3X1 1017 aaPredicted RBP15.24■□□□□ 0.03
SHANK2-214ENST00000468619 PIGBQ92521 554 aa15.24■□□□□ 0.03
SHANK2-214ENST00000468619 JPH2Q9BR39 696 aaPredicted RBP15.24■□□□□ 0.03
SHANK2-214ENST00000468619 FAM107BQ9H098 131 aa15.24■□□□□ 0.03
SHANK2-214ENST00000468619 CCDC196A0A1B0GTZ2 297 aa15.23■□□□□ 0.03
SHANK2-214ENST00000468619 KIF28PB7ZC32 967 aa15.23■□□□□ 0.03
SHANK2-214ENST00000468619 SNRPA1P09661 255 aaKnown RBP15.23■□□□□ 0.03
SHANK2-214ENST00000468619 MYL6BP14649 208 aa15.23■□□□□ 0.03
SHANK2-214ENST00000468619 ANO1Q5XXA6 986 aa15.23■□□□□ 0.03
SHANK2-214ENST00000468619 CDCA7Q9BWT1 371 aaPredicted RBP15.23■□□□□ 0.03
SHANK2-214ENST00000468619 KAT14Q9H8E8 782 aa15.23■□□□□ 0.03
SHANK2-214ENST00000468619 KCPQ6ZWJ8 1503 aa15.23■□□□□ 0.03
SHANK2-214ENST00000468619 BMP6P22004 513 aa15.23■□□□□ 0.03
SHANK2-214ENST00000468619 TDO2P48775 406 aa15.23■□□□□ 0.03
SHANK2-214ENST00000468619 VPS72Q15906 364 aa15.23■□□□□ 0.03
SHANK2-214ENST00000468619 NCAPH2Q6IBW4 605 aa15.23■□□□□ 0.03
SHANK2-214ENST00000468619 GPHNQ9NQX3 736 aaPredicted RBP15.23■□□□□ 0.03
SHANK2-214ENST00000468619 RAI14Q9P0K7 980 aa15.23■□□□□ 0.03
SHANK2-214ENST00000468619 NFE2L3Q9Y4A8 694 aa15.23■□□□□ 0.03
SHANK2-214ENST00000468619 PCDHA5Q9Y5H7 936 aa15.23■□□□□ 0.03
SHANK2-214ENST00000468619 CDHR2Q9BYE9 1310 aa15.22■□□□□ 0.03
SHANK2-214ENST00000468619 ASAP1Q9ULH1 1129 aa15.22■□□□□ 0.03
SHANK2-214ENST00000468619 LAMB4A4D0S4 1761 aa15.22■□□□□ 0.03
SHANK2-214ENST00000468619 FOXN1O15353 648 aa15.22■□□□□ 0.03
SHANK2-214ENST00000468619 BARGINQ6ZT62 677 aa15.22■□□□□ 0.03
SHANK2-214ENST00000468619 MAP3K2Q9Y2U5 619 aa15.22■□□□□ 0.03
SHANK2-214ENST00000468619 AKR1B15C9JRZ8 316 aaPredicted RBP15.21■□□□□ 0.03
SHANK2-214ENST00000468619 KIF1CO43896 1103 aaKnown RBP15.21■□□□□ 0.03
SHANK2-214ENST00000468619 INPP5BP32019 993 aa15.21■□□□□ 0.03
SHANK2-214ENST00000468619 GGCXP38435 758 aa15.21■□□□□ 0.03
SHANK2-214ENST00000468619 FMR1Q06787 632 aaKnown RBP eCLIP15.21■□□□□ 0.03
SHANK2-214ENST00000468619 AIMP1Q12904 312 aaKnown RBP15.21■□□□□ 0.03
SHANK2-214ENST00000468619 PDIA6Q15084 440 aa15.21■□□□□ 0.03
SHANK2-214ENST00000468619 METTL16Q86W50 562 aaKnown RBP15.21■□□□□ 0.03
SHANK2-214ENST00000468619 MARCH10Q8NA82 808 aaPredicted RBP15.21■□□□□ 0.03
SHANK2-214ENST00000468619 TEX13AQ9BXU3 409 aaPredicted RBP15.21■□□□□ 0.03
SHANK2-214ENST00000468619 ZNF609O15014 1411 aa15.21■□□□□ 0.03
SHANK2-214ENST00000468619 ZMYND10O75800 440 aa15.21■□□□□ 0.03
SHANK2-214ENST00000468619 USP8P40818 1118 aa15.21■□□□□ 0.03
SHANK2-214ENST00000468619 LONRF3Q496Y0 759 aa15.21■□□□□ 0.03
SHANK2-214ENST00000468619 TTC19Q6DKK2 380 aaPredicted RBP15.21■□□□□ 0.03
SHANK2-214ENST00000468619 SHC4Q6S5L8 630 aa15.21■□□□□ 0.03
SHANK2-214ENST00000468619 DHX37Q8IY37 1157 aaKnown RBP15.21■□□□□ 0.03
SHANK2-214ENST00000468619 ACSBG1Q96GR2 724 aa15.21■□□□□ 0.03
SHANK2-214ENST00000468619 SUCLG2Q96I99 432 aa15.21■□□□□ 0.03
SHANK2-214ENST00000468619 HPCAL4Q9UM19 191 aa15.21■□□□□ 0.03
SHANK2-214ENST00000468619 SAMM50Q9Y512 469 aa15.21■□□□□ 0.03
SHANK2-214ENST00000468619 HMGB1P09429 215 aaKnown RBP15.2■□□□□ 0.02
SHANK2-214ENST00000468619 AARSP49588 968 aaKnown RBP eCLIP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms