RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 DBNLQ9UJU6 430 aaKnown RBP30.06■■■□□ 2.4
PTCH1-210ENST00000468211 TRIM75PA6NK02 468 aa30.05■■■□□ 2.4
PTCH1-210ENST00000468211 OSBPP22059 807 aa30.05■■■□□ 2.4
PTCH1-210ENST00000468211 ZAP70P43403 619 aa30.05■■■□□ 2.4
PTCH1-210ENST00000468211 PANK1Q8TE04 598 aa30.05■■■□□ 2.4
PTCH1-210ENST00000468211 TMEM106CQ9BVX2 250 aa30.05■■■□□ 2.4
PTCH1-210ENST00000468211 CCDC8Q9H0W5 538 aaPredicted RBP30.05■■■□□ 2.4
PTCH1-210ENST00000468211 AATFQ9NY61 560 aaKnown RBP eCLIP30.05■■■□□ 2.4
PTCH1-210ENST00000468211 SRRDQ9UH36 339 aa30.05■■■□□ 2.4
PTCH1-210ENST00000468211 NAA16Q6N069 864 aaPredicted RBP30.04■■■□□ 2.4
PTCH1-210ENST00000468211 EAF2Q96CJ1 260 aaPredicted RBP30.04■■■□□ 2.4
PTCH1-210ENST00000468211 ZNF512BQ96KM6 892 aaPredicted RBP30.04■■■□□ 2.4
PTCH1-210ENST00000468211 PIH1D3Q9NQM4 214 aaKnown RBP30.04■■■□□ 2.4
PTCH1-210ENST00000468211 FMNL1O95466 1100 aaPredicted RBP30.03■■■□□ 2.4
PTCH1-210ENST00000468211 PRMT2P55345 433 aa30.03■■■□□ 2.4
PTCH1-210ENST00000468211 CEP85Q6P2H3 762 aa30.03■■■□□ 2.4
PTCH1-210ENST00000468211 LOC285556D6RIA3 1793 aa30.02■■■□□ 2.4
PTCH1-210ENST00000468211 SLC4A8Q2Y0W8 1093 aa30.01■■■□□ 2.39
PTCH1-210ENST00000468211 DOCK3Q8IZD9 2030 aa30■■■□□ 2.39
PTCH1-210ENST00000468211 PPP4CP60510 307 aa30■■■□□ 2.39
PTCH1-210ENST00000468211 TREML2Q5T2D2 321 aa30■■■□□ 2.39
PTCH1-210ENST00000468211 NOL10Q9BSC4 688 aaKnown RBP30■■■□□ 2.39
PTCH1-210ENST00000468211 SLC45A1Q9Y2W3 748 aa30■■■□□ 2.39
PTCH1-210ENST00000468211 CAP2P40123 477 aa29.99■■■□□ 2.39
PTCH1-210ENST00000468211 MAPKAPK5Q8IW41 473 aa29.99■■■□□ 2.39
PTCH1-210ENST00000468211 TGFBRAP1Q8WUH2 860 aa29.99■■■□□ 2.39
PTCH1-210ENST00000468211 EXOC6BQ9Y2D4 811 aa29.99■■■□□ 2.39
PTCH1-210ENST00000468211 MYPNQ86TC9 1320 aa29.98■■■□□ 2.39
PTCH1-210ENST00000468211 BAG3O95817 575 aa29.98■■■□□ 2.39
PTCH1-210ENST00000468211 SPP2Q13103 211 aa29.98■■■□□ 2.39
PTCH1-210ENST00000468211 MTFR1Q15390 333 aa29.98■■■□□ 2.39
PTCH1-210ENST00000468211 NDUFB9Q9Y6M9 179 aa29.98■■■□□ 2.39
PTCH1-210ENST00000468211 HOXD10P28358 340 aa29.97■■■□□ 2.39
PTCH1-210ENST00000468211 DYNLL1P63167 89 aaKnown RBP29.97■■■□□ 2.39
PTCH1-210ENST00000468211 PRKCZQ05513 592 aa29.97■■■□□ 2.39
PTCH1-210ENST00000468211 GABRQQ9UN88 632 aa29.97■■■□□ 2.39
PTCH1-210ENST00000468211 AGTPBP1Q9UPW5 1226 aa29.97■■■□□ 2.39
PTCH1-210ENST00000468211 FLT1P17948 1338 aa29.96■■■□□ 2.39
PTCH1-210ENST00000468211 MYH1P12882 1939 aa29.96■■■□□ 2.39
PTCH1-210ENST00000468211 FCGRTP55899 365 aa29.96■■■□□ 2.39
PTCH1-210ENST00000468211 JAG1P78504 1218 aa29.96■■■□□ 2.39
PTCH1-210ENST00000468211 RAET1EQ8TD07 263 aa29.96■■■□□ 2.39
PTCH1-210ENST00000468211 DNAJC18Q9H819 358 aa29.96■■■□□ 2.39
PTCH1-210ENST00000468211 PI4KBQ9UBF8 816 aa29.96■■■□□ 2.39
PTCH1-210ENST00000468211 HERC5Q9UII4 1024 aaKnown RBP29.96■■■□□ 2.39
PTCH1-210ENST00000468211 PLCG2P16885 1265 aa29.95■■■□□ 2.39
PTCH1-210ENST00000468211 GRK4P32298 578 aa29.95■■■□□ 2.39
PTCH1-210ENST00000468211 ZNF280CQ8ND82 737 aa29.95■■■□□ 2.39
PTCH1-210ENST00000468211 SHROOM1Q2M3G4 852 aaPredicted RBP29.94■■■□□ 2.38
PTCH1-210ENST00000468211 SMCR8Q8TEV9 937 aaPredicted RBP29.94■■■□□ 2.38
PTCH1-210ENST00000468211 DHX36Q9H2U1 1008 aaKnown RBP29.94■■■□□ 2.38
PTCH1-210ENST00000468211 ANTXR1Q9H6X2 564 aa29.94■■■□□ 2.38
PTCH1-210ENST00000468211 PALD1Q9ULE6 856 aa29.94■■■□□ 2.38
PTCH1-210ENST00000468211 CYP7A1P22680 504 aa29.93■■■□□ 2.38
PTCH1-210ENST00000468211 HMGCS2P54868 508 aa29.93■■■□□ 2.38
PTCH1-210ENST00000468211 PROCA1Q8NCQ7 364 aaPredicted RBP29.93■■■□□ 2.38
PTCH1-210ENST00000468211 USP17L5A8MUK1 530 aa29.92■■■□□ 2.38
PTCH1-210ENST00000468211 IDH1O75874 414 aaKnown RBP29.92■■■□□ 2.38
PTCH1-210ENST00000468211 AACSQ86V21 672 aa29.92■■■□□ 2.38
PTCH1-210ENST00000468211 SHISA4Q96DD7 197 aa29.92■■■□□ 2.38
PTCH1-210ENST00000468211 SAP30BPQ9UHR5 308 aaKnown RBP29.92■■■□□ 2.38
PTCH1-210ENST00000468211 METTL16Q86W50 562 aaKnown RBP29.91■■■□□ 2.38
PTCH1-210ENST00000468211 ANKRD13CQ8N6S4 541 aa29.91■■■□□ 2.38
PTCH1-210ENST00000468211 MIGA1Q8NAN2 632 aa29.9■■■□□ 2.38
PTCH1-210ENST00000468211 IL1RAPL2Q9NP60 686 aa29.9■■■□□ 2.38
PTCH1-210ENST00000468211 SH3D19Q5HYK7 790 aa29.89■■■□□ 2.38
PTCH1-210ENST00000468211 ERC1Q8IUD2 1116 aa29.89■■■□□ 2.38
PTCH1-210ENST00000468211 FOXP4Q8IVH2 680 aaPredicted RBP29.89■■■□□ 2.38
PTCH1-210ENST00000468211 MAGEB6Q8N7X4 407 aa29.89■■■□□ 2.38
PTCH1-210ENST00000468211 TBC1D2Q9BYX2 928 aa29.89■■■□□ 2.38
PTCH1-210ENST00000468211 IGSF3O75054 1194 aa29.88■■■□□ 2.37
PTCH1-210ENST00000468211 CCL5P13501 91 aa29.88■■■□□ 2.37
PTCH1-210ENST00000468211 FLT3LGP49771 235 aa29.88■■■□□ 2.37
PTCH1-210ENST00000468211 GDF11O95390 407 aa29.87■■■□□ 2.37
PTCH1-210ENST00000468211 SIRT2Q8IXJ6 389 aa29.87■■■□□ 2.37
PTCH1-210ENST00000468211 CRACR2BQ8N4Y2 399 aaPredicted RBP29.87■■■□□ 2.37
PTCH1-210ENST00000468211 RHPN1Q8TCX5 695 aa29.87■■■□□ 2.37
PTCH1-210ENST00000468211 WDR18Q9BV38 432 aa29.87■■■□□ 2.37
PTCH1-210ENST00000468211 BIN2Q9UBW5 565 aaPredicted RBP29.87■■■□□ 2.37
PTCH1-210ENST00000468211 PNMA3Q9UL41 463 aa29.87■■■□□ 2.37
PTCH1-210ENST00000468211 COG6Q9Y2V7 657 aa29.87■■■□□ 2.37
PTCH1-210ENST00000468211 TNPO2O14787 897 aaKnown RBP29.86■■■□□ 2.37
PTCH1-210ENST00000468211 ELNP15502 786 aa29.86■■■□□ 2.37
PTCH1-210ENST00000468211 MTMR2Q13614 643 aa29.86■■■□□ 2.37
PTCH1-210ENST00000468211 ASCC2Q9H1I8 757 aaPredicted RBP29.86■■■□□ 2.37
PTCH1-210ENST00000468211 AS3MTQ9HBK9 375 aa29.86■■■□□ 2.37
PTCH1-210ENST00000468211 ADCY3O60266 1144 aa29.85■■■□□ 2.37
PTCH1-210ENST00000468211 ASNSP08243 561 aa29.85■■■□□ 2.37
PTCH1-210ENST00000468211 FAM110CQ1W6H9 321 aa29.85■■■□□ 2.37
PTCH1-210ENST00000468211 SLAIN1Q8ND83 568 aa29.85■■■□□ 2.37
PTCH1-210ENST00000468211 CEP290O15078 2479 aa29.85■■■□□ 2.37
PTCH1-210ENST00000468211 APBB1O00213 710 aa29.84■■■□□ 2.37
PTCH1-210ENST00000468211 BACE1P56817 501 aa29.84■■■□□ 2.37
PTCH1-210ENST00000468211 RNF208Q9H0X6 261 aa29.84■■■□□ 2.37
PTCH1-210ENST00000468211 ZBTB40Q9NUA8 1239 aa29.84■■■□□ 2.37
PTCH1-210ENST00000468211 ZBTB21Q9ULJ3 1066 aa29.84■■■□□ 2.37
PTCH1-210ENST00000468211 PLXNB2O15031 1838 aa29.83■■■□□ 2.37
PTCH1-210ENST00000468211 GJB1P08034 283 aa29.83■■■□□ 2.37
PTCH1-210ENST00000468211 TRIM34Q9BYJ4 488 aa29.83■■■□□ 2.37
PTCH1-210ENST00000468211 UNC93B1Q9H1C4 597 aa29.83■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms