RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 PI4KBQ9UBF8 816 aa14.01□□□□□ -0.17
CDHR3-205ENST00000468143 KCNH4Q9UQ05 1017 aa14.01□□□□□ -0.17
CDHR3-205ENST00000468143 AK9Q5TCS8 1911 aa14.01□□□□□ -0.17
CDHR3-205ENST00000468143 NOM1Q5C9Z4 860 aaKnown RBP14□□□□□ -0.17
CDHR3-205ENST00000468143 CRACR2BQ8N4Y2 399 aaPredicted RBP14□□□□□ -0.17
CDHR3-205ENST00000468143 RIOK1Q9BRS2 568 aaKnown RBP14□□□□□ -0.17
CDHR3-205ENST00000468143 ECHDC1Q9NTX5 307 aa14□□□□□ -0.17
CDHR3-205ENST00000468143 AFG3L2Q9Y4W6 797 aa14□□□□□ -0.17
CDHR3-205ENST00000468143 TCRBV5S4A2TA0A5A2 114 aa13.99□□□□□ -0.17
CDHR3-205ENST00000468143 TRIM75PA6NK02 468 aa13.99□□□□□ -0.17
CDHR3-205ENST00000468143 PDHXO00330 501 aa13.99□□□□□ -0.17
CDHR3-205ENST00000468143 CXCL11O14625 94 aa13.99□□□□□ -0.17
CDHR3-205ENST00000468143 ECM2O94769 699 aaPredicted RBP13.99□□□□□ -0.17
CDHR3-205ENST00000468143 CAP2P40123 477 aa13.99□□□□□ -0.17
CDHR3-205ENST00000468143 MOGSQ13724 837 aa13.99□□□□□ -0.17
CDHR3-205ENST00000468143 FOXP4Q8IVH2 680 aaPredicted RBP13.99□□□□□ -0.17
CDHR3-205ENST00000468143 CD99L2Q8TCZ2 262 aa13.99□□□□□ -0.17
CDHR3-205ENST00000468143 TRIM34Q9BYJ4 488 aa13.99□□□□□ -0.17
CDHR3-205ENST00000468143 HERC5Q9UII4 1024 aaKnown RBP13.99□□□□□ -0.17
CDHR3-205ENST00000468143 MYO5AQ9Y4I1 1855 aaKnown RBP13.99□□□□□ -0.17
CDHR3-205ENST00000468143 MAST2Q6P0Q8 1798 aa13.99□□□□□ -0.17
CDHR3-205ENST00000468143 HLA-DOAP06340 250 aa13.98□□□□□ -0.17
CDHR3-205ENST00000468143 JAG1P78504 1218 aa13.98□□□□□ -0.17
CDHR3-205ENST00000468143 CAP1Q01518 475 aa13.98□□□□□ -0.17
CDHR3-205ENST00000468143 SP3Q02447 781 aa13.98□□□□□ -0.17
CDHR3-205ENST00000468143 SHROOM1Q2M3G4 852 aaPredicted RBP13.98□□□□□ -0.17
CDHR3-205ENST00000468143 GPAT2Q6NUI2 795 aa13.98□□□□□ -0.17
CDHR3-205ENST00000468143 GADL1Q6ZQY3 521 aa13.98□□□□□ -0.17
CDHR3-205ENST00000468143 ANKRD23Q86SG2 305 aa13.98□□□□□ -0.17
CDHR3-205ENST00000468143 LCORLQ8N3X6 602 aa13.98□□□□□ -0.17
CDHR3-205ENST00000468143 OTUD7AQ8TE49 926 aaPredicted RBP13.98□□□□□ -0.17
CDHR3-205ENST00000468143 DNAJC18Q9H819 358 aa13.98□□□□□ -0.17
CDHR3-205ENST00000468143 ARMT1Q9H993 441 aa13.98□□□□□ -0.17
CDHR3-205ENST00000468143 TRIM17Q9Y577 477 aa13.98□□□□□ -0.17
CDHR3-205ENST00000468143 SUPT16HQ9Y5B9 1047 aaKnown RBP13.98□□□□□ -0.17
CDHR3-205ENST00000468143 COL2A1P02458 1487 aaPredicted RBP13.98□□□□□ -0.17
CDHR3-205ENST00000468143 DOCK2Q92608 1830 aa13.97□□□□□ -0.17
CDHR3-205ENST00000468143 GDF11O95390 407 aa13.97□□□□□ -0.17
CDHR3-205ENST00000468143 ADD2P35612 726 aa13.97□□□□□ -0.17
CDHR3-205ENST00000468143 SPP2Q13103 211 aa13.97□□□□□ -0.17
CDHR3-205ENST00000468143 ANKRD45Q5TZF3 282 aa13.97□□□□□ -0.17
CDHR3-205ENST00000468143 EXOC6Q8TAG9 804 aa13.97□□□□□ -0.17
CDHR3-205ENST00000468143 SDR42E1Q8WUS8 393 aa13.97□□□□□ -0.17
CDHR3-205ENST00000468143 ERO1AQ96HE7 468 aa13.97□□□□□ -0.17
CDHR3-205ENST00000468143 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.97□□□□□ -0.17
CDHR3-205ENST00000468143 CPA4Q9UI42 421 aa13.97□□□□□ -0.17
CDHR3-205ENST00000468143 A0A0G2JLL6 359 aaPredicted RBP13.96□□□□□ -0.17
CDHR3-205ENST00000468143 PRKAB2O43741 272 aa13.96□□□□□ -0.17
CDHR3-205ENST00000468143 TLR2O60603 784 aa13.96□□□□□ -0.17
CDHR3-205ENST00000468143 MBD4O95243 580 aa13.96□□□□□ -0.17
CDHR3-205ENST00000468143 CYP2C8P10632 490 aa13.96□□□□□ -0.17
CDHR3-205ENST00000468143 PLCD1P51178 756 aa13.96□□□□□ -0.17
CDHR3-205ENST00000468143 EVX2Q03828 476 aa13.96□□□□□ -0.17
CDHR3-205ENST00000468143 TMED8Q6PL24 325 aaPredicted RBP13.96□□□□□ -0.17
CDHR3-205ENST00000468143 PRRT2Q7Z6L0 340 aaPredicted RBP13.96□□□□□ -0.17
CDHR3-205ENST00000468143 CERS3Q8IU89 383 aa13.96□□□□□ -0.17
CDHR3-205ENST00000468143 GPATCH3Q96I76 525 aa13.96□□□□□ -0.17
CDHR3-205ENST00000468143 CRNKL1Q9BZJ0 848 aaKnown RBP13.96□□□□□ -0.17
CDHR3-205ENST00000468143 HPS5Q9UPZ3 1129 aa13.96□□□□□ -0.17
CDHR3-205ENST00000468143 USP17L5A8MUK1 530 aa13.95□□□□□ -0.18
CDHR3-205ENST00000468143 POLR3DP05423 398 aaPredicted RBP13.95□□□□□ -0.18
CDHR3-205ENST00000468143 PKN2Q16513 984 aaKnown RBP13.95□□□□□ -0.18
CDHR3-205ENST00000468143 FASTKD5Q7L8L6 764 aaKnown RBP13.95□□□□□ -0.18
CDHR3-205ENST00000468143 OTOP1Q7RTM1 612 aa13.95□□□□□ -0.18
CDHR3-205ENST00000468143 TTC6Q86TZ1 520 aa13.95□□□□□ -0.18
CDHR3-205ENST00000468143 METTL16Q86W50 562 aaKnown RBP13.95□□□□□ -0.18
CDHR3-205ENST00000468143 ZCCHC17Q9NP64 241 aaKnown RBP13.95□□□□□ -0.18
CDHR3-205ENST00000468143 MCM9Q9NXL9 1143 aa13.95□□□□□ -0.18
CDHR3-205ENST00000468143 CYP2D6P10635 497 aa13.94□□□□□ -0.18
CDHR3-205ENST00000468143 HDAC1Q13547 482 aaPredicted RBP13.94□□□□□ -0.18
CDHR3-205ENST00000468143 UBE3CQ15386 1083 aa13.94□□□□□ -0.18
CDHR3-205ENST00000468143 ZSCAN25Q6NSZ9 544 aa13.94□□□□□ -0.18
CDHR3-205ENST00000468143 FBXO46Q6PJ61 603 aaPredicted RBP13.94□□□□□ -0.18
CDHR3-205ENST00000468143 ZNF280CQ8ND82 737 aa13.94□□□□□ -0.18
CDHR3-205ENST00000468143 ARHGAP39Q9C0H5 1083 aa13.94□□□□□ -0.18
CDHR3-205ENST00000468143 PUS7LQ9H0K6 701 aaKnown RBP13.94□□□□□ -0.18
CDHR3-205ENST00000468143 EFCC1Q9HA90 598 aa13.94□□□□□ -0.18
CDHR3-205ENST00000468143 ZBTB47Q9UFB7 747 aaPredicted RBP13.94□□□□□ -0.18
CDHR3-205ENST00000468143 SERPINB13Q9UIV8 391 aa13.94□□□□□ -0.18
CDHR3-205ENST00000468143 LAMB1P07942 1786 aa13.94□□□□□ -0.18
CDHR3-205ENST00000468143 HMGCS2P54868 508 aa13.93□□□□□ -0.18
CDHR3-205ENST00000468143 TREML2Q5T2D2 321 aa13.93□□□□□ -0.18
CDHR3-205ENST00000468143 C17orf99Q6UX52 265 aa13.93□□□□□ -0.18
CDHR3-205ENST00000468143 AS3MTQ9HBK9 375 aa13.93□□□□□ -0.18
CDHR3-205ENST00000468143 DCP1AQ9NPI6 582 aaPredicted RBP13.93□□□□□ -0.18
CDHR3-205ENST00000468143 GH2P01242 217 aa13.92□□□□□ -0.18
CDHR3-205ENST00000468143 IGHDP01880 384 aa13.92□□□□□ -0.18
CDHR3-205ENST00000468143 ASNSP08243 561 aa13.92□□□□□ -0.18
CDHR3-205ENST00000468143 SOX10P56693 466 aa13.92□□□□□ -0.18
CDHR3-205ENST00000468143 IRX6P78412 446 aaPredicted RBP13.92□□□□□ -0.18
CDHR3-205ENST00000468143 LACTBP83111 547 aaPredicted RBP13.92□□□□□ -0.18
CDHR3-205ENST00000468143 B4GALNT3Q6L9W6 998 aa13.92□□□□□ -0.18
CDHR3-205ENST00000468143 TATDN1Q6P1N9 297 aa13.92□□□□□ -0.18
CDHR3-205ENST00000468143 KBTBD3Q8NAB2 608 aa13.92□□□□□ -0.18
CDHR3-205ENST00000468143 PI4K2BQ8TCG2 481 aa13.92□□□□□ -0.18
CDHR3-205ENST00000468143 GCC1Q96CN9 775 aa13.92□□□□□ -0.18
CDHR3-205ENST00000468143 PARK7Q99497 189 aaKnown RBP13.92□□□□□ -0.18
CDHR3-205ENST00000468143 EHD4Q9H223 541 aa13.92□□□□□ -0.18
CDHR3-205ENST00000468143 ZBTB21Q9ULJ3 1066 aa13.92□□□□□ -0.18
CDHR3-205ENST00000468143 PTPN22Q9Y2R2 807 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms