RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 TTC22Q5TAA0 569 aa13.39□□□□□ -0.27
PRPF3-203ENST00000467514 GPR153Q6NV75 609 aa13.39□□□□□ -0.27
PRPF3-203ENST00000467514 PXYLP1Q8TE99 480 aa13.39□□□□□ -0.27
PRPF3-203ENST00000467514 FAM151AQ8WW52 585 aa13.39□□□□□ -0.27
PRPF3-203ENST00000467514 PUS3Q9BZE2 481 aaKnown RBP13.39□□□□□ -0.27
PRPF3-203ENST00000467514 ZBTB47Q9UFB7 747 aaPredicted RBP13.39□□□□□ -0.27
PRPF3-203ENST00000467514 APOBEC3HQ6NTF7 200 aaKnown RBP13.38□□□□□ -0.27
PRPF3-203ENST00000467514 ZSCAN29Q8IWY8 852 aaPredicted RBP13.38□□□□□ -0.27
PRPF3-203ENST00000467514 TDHQ8IZJ6 230 aa13.38□□□□□ -0.27
PRPF3-203ENST00000467514 KLHDC4Q8TBB5 520 aa13.38□□□□□ -0.27
PRPF3-203ENST00000467514 DIS3LQ8TF46 1054 aaKnown RBP13.38□□□□□ -0.27
PRPF3-203ENST00000467514 UBE2OQ9C0C9 1292 aaKnown RBP13.38□□□□□ -0.27
PRPF3-203ENST00000467514 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.38□□□□□ -0.27
PRPF3-203ENST00000467514 IL1RAPL2Q9NP60 686 aa13.38□□□□□ -0.27
PRPF3-203ENST00000467514 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.38□□□□□ -0.27
PRPF3-203ENST00000467514 DOCK2Q92608 1830 aa13.38□□□□□ -0.27
PRPF3-203ENST00000467514 CXCL11O14625 94 aa13.37□□□□□ -0.27
PRPF3-203ENST00000467514 CIAO1O76071 339 aa13.37□□□□□ -0.27
PRPF3-203ENST00000467514 BMP8BP34820 402 aa13.37□□□□□ -0.27
PRPF3-203ENST00000467514 G3BP1Q13283 466 aaKnown RBP eCLIP13.37□□□□□ -0.27
PRPF3-203ENST00000467514 ATG9AQ7Z3C6 839 aa13.37□□□□□ -0.27
PRPF3-203ENST00000467514 GDF15Q99988 308 aa13.37□□□□□ -0.27
PRPF3-203ENST00000467514 NBPF3Q9H094 633 aa13.37□□□□□ -0.27
PRPF3-203ENST00000467514 SUGT1Q9Y2Z0 365 aa13.37□□□□□ -0.27
PRPF3-203ENST00000467514 ZHX2Q9Y6X8 837 aa13.37□□□□□ -0.27
PRPF3-203ENST00000467514 UNC80Q8N2C7 3258 aa13.37□□□□□ -0.27
PRPF3-203ENST00000467514 IFIT1P09914 478 aaKnown RBP13.36□□□□□ -0.27
PRPF3-203ENST00000467514 MX1P20591 662 aa13.36□□□□□ -0.27
PRPF3-203ENST00000467514 MAGEA10P43363 369 aaPredicted RBP13.36□□□□□ -0.27
PRPF3-203ENST00000467514 IRF5Q13568 498 aa13.36□□□□□ -0.27
PRPF3-203ENST00000467514 NOL9Q5SY16 702 aaKnown RBP13.36□□□□□ -0.27
PRPF3-203ENST00000467514 GPAT2Q6NUI2 795 aa13.36□□□□□ -0.27
PRPF3-203ENST00000467514 HHIPL2Q6UWX4 724 aa13.36□□□□□ -0.27
PRPF3-203ENST00000467514 FBXO33Q7Z6M2 555 aa13.36□□□□□ -0.27
PRPF3-203ENST00000467514 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.36□□□□□ -0.27
PRPF3-203ENST00000467514 ANKRD13CQ8N6S4 541 aa13.36□□□□□ -0.27
PRPF3-203ENST00000467514 PAK6Q9NQU5 681 aaPredicted RBP13.36□□□□□ -0.27
PRPF3-203ENST00000467514 FBXO3Q9UK99 471 aa13.36□□□□□ -0.27
PRPF3-203ENST00000467514 PNMA3Q9UL41 463 aa13.36□□□□□ -0.27
PRPF3-203ENST00000467514 DDX60LQ5H9U9 1706 aaKnown RBP13.36□□□□□ -0.27
PRPF3-203ENST00000467514 A0A0G2JLL6 359 aaPredicted RBP13.35□□□□□ -0.27
PRPF3-203ENST00000467514 TRIM75PA6NK02 468 aa13.35□□□□□ -0.27
PRPF3-203ENST00000467514 PRRT2Q7Z6L0 340 aaPredicted RBP13.35□□□□□ -0.27
PRPF3-203ENST00000467514 SCYL3Q8IZE3 742 aa13.35□□□□□ -0.27
PRPF3-203ENST00000467514 ANKLE1Q8NAG6 615 aa13.35□□□□□ -0.27
PRPF3-203ENST00000467514 WDR66Q8TBY9 1149 aa13.35□□□□□ -0.27
PRPF3-203ENST00000467514 MRIQ9BWK5 157 aa13.35□□□□□ -0.27
PRPF3-203ENST00000467514 COL25A1Q9BXS0 654 aaPredicted RBP13.35□□□□□ -0.27
PRPF3-203ENST00000467514 SIL1Q9H173 461 aa13.35□□□□□ -0.27
PRPF3-203ENST00000467514 C11orf49Q9H6J7 331 aa13.35□□□□□ -0.27
PRPF3-203ENST00000467514 HMX1Q9NP08 348 aaPredicted RBP13.35□□□□□ -0.27
PRPF3-203ENST00000467514 MTMR10Q9NXD2 777 aa13.35□□□□□ -0.27
PRPF3-203ENST00000467514 ZNF112Q9UJU3 913 aa13.35□□□□□ -0.27
PRPF3-203ENST00000467514 DOCK1Q14185 1865 aa13.34□□□□□ -0.27
PRPF3-203ENST00000467514 EYA2O00167 538 aa13.34□□□□□ -0.27
PRPF3-203ENST00000467514 SEC24BO95487 1268 aa13.34□□□□□ -0.27
PRPF3-203ENST00000467514 HMGCRP04035 888 aa13.34□□□□□ -0.27
PRPF3-203ENST00000467514 OS9Q13438 667 aaPredicted RBP13.34□□□□□ -0.27
PRPF3-203ENST00000467514 MOGSQ13724 837 aa13.34□□□□□ -0.27
PRPF3-203ENST00000467514 LRIT3Q3SXY7 679 aa13.34□□□□□ -0.27
PRPF3-203ENST00000467514 CDC42EP5Q6NZY7 148 aa13.34□□□□□ -0.27
PRPF3-203ENST00000467514 CLASRPQ8N2M8 674 aaKnown RBP13.34□□□□□ -0.27
PRPF3-203ENST00000467514 PI4K2BQ8TCG2 481 aa13.34□□□□□ -0.27
PRPF3-203ENST00000467514 EAF2Q96CJ1 260 aaPredicted RBP13.34□□□□□ -0.27
PRPF3-203ENST00000467514 CRISPLD2Q9H0B8 497 aa13.34□□□□□ -0.27
PRPF3-203ENST00000467514 GPR108Q9NPR9 543 aa13.34□□□□□ -0.27
PRPF3-203ENST00000467514 USP40Q9NVE5 1235 aa13.34□□□□□ -0.27
PRPF3-203ENST00000467514 PTPRFP10586 1907 aa13.33□□□□□ -0.28
PRPF3-203ENST00000467514 PDE8BO95263 885 aa13.33□□□□□ -0.28
PRPF3-203ENST00000467514 SLC5A1P13866 664 aa13.33□□□□□ -0.28
PRPF3-203ENST00000467514 SDSP20132 328 aa13.33□□□□□ -0.28
PRPF3-203ENST00000467514 IL15P40933 162 aaPredicted RBP13.33□□□□□ -0.28
PRPF3-203ENST00000467514 TFCP2Q12800 502 aa13.33□□□□□ -0.28
PRPF3-203ENST00000467514 NFIAQ12857 509 aa13.33□□□□□ -0.28
PRPF3-203ENST00000467514 PUM3Q15397 648 aaKnown RBP13.33□□□□□ -0.28
PRPF3-203ENST00000467514 DIXDC1Q155Q3 683 aa13.33□□□□□ -0.28
PRPF3-203ENST00000467514 LRRC24Q50LG9 513 aa13.33□□□□□ -0.28
PRPF3-203ENST00000467514 SLC45A1Q9Y2W3 748 aa13.33□□□□□ -0.28
PRPF3-203ENST00000467514 DAGLAQ9Y4D2 1042 aa13.33□□□□□ -0.28
PRPF3-203ENST00000467514 DOCK3Q8IZD9 2030 aa13.33□□□□□ -0.28
PRPF3-203ENST00000467514 TTC41PQ6P2S7 1318 aa13.33□□□□□ -0.28
PRPF3-203ENST00000467514 RPTORQ8N122 1335 aa13.33□□□□□ -0.28
PRPF3-203ENST00000467514 LDHBP07195 334 aaKnown RBP13.32□□□□□ -0.28
PRPF3-203ENST00000467514 PTPRAP18433 802 aa13.32□□□□□ -0.28
PRPF3-203ENST00000467514 TSHZ3Q63HK5 1081 aa13.32□□□□□ -0.28
PRPF3-203ENST00000467514 FAM161BQ96MY7 647 aa13.32□□□□□ -0.28
PRPF3-203ENST00000467514 FAM110CQ1W6H9 321 aa13.31□□□□□ -0.28
PRPF3-203ENST00000467514 TNNI3KQ59H18 835 aa13.31□□□□□ -0.28
PRPF3-203ENST00000467514 AACSQ86V21 672 aa13.31□□□□□ -0.28
PRPF3-203ENST00000467514 ECHDC1Q9NTX5 307 aa13.31□□□□□ -0.28
PRPF3-203ENST00000467514 GNL3LQ9NVN8 582 aaKnown RBP13.31□□□□□ -0.28
PRPF3-203ENST00000467514 TLR7Q9NYK1 1049 aaKnown RBP13.31□□□□□ -0.28
PRPF3-203ENST00000467514 AGTPBP1Q9UPW5 1226 aa13.31□□□□□ -0.28
PRPF3-203ENST00000467514 FPGT-TNNI3KV9GXZ4 949 aa13.31□□□□□ -0.28
PRPF3-203ENST00000467514 CDC45O75419 566 aa13.3□□□□□ -0.28
PRPF3-203ENST00000467514 MDM2Q00987 491 aaPredicted RBP13.3□□□□□ -0.28
PRPF3-203ENST00000467514 PABPC4Q13310 644 aaKnown RBP eCLIP13.3□□□□□ -0.28
PRPF3-203ENST00000467514 PICALMQ13492 652 aa13.3□□□□□ -0.28
PRPF3-203ENST00000467514 TBC1D9Q6ZT07 1266 aa13.3□□□□□ -0.28
PRPF3-203ENST00000467514 CCAR1Q8IX12 1150 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms