RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 KCNA3P22001 575 aa7.63□□□□□ -1.19
PTCD3-207ENST00000467273 AMPHP49418 695 aa7.63□□□□□ -1.19
PTCD3-207ENST00000467273 DALRD3Q5D0E6 543 aaKnown RBP7.63□□□□□ -1.19
PTCD3-207ENST00000467273 PSAPL1Q6NUJ1 521 aa7.63□□□□□ -1.19
PTCD3-207ENST00000467273 LTV1Q96GA3 475 aaPredicted RBP7.63□□□□□ -1.19
PTCD3-207ENST00000467273 NOD1Q9Y239 953 aa7.63□□□□□ -1.19
PTCD3-207ENST00000467273 GLTPD2A6NH11 291 aa7.62□□□□□ -1.19
PTCD3-207ENST00000467273 CTCFP49711 727 aaPredicted RBP7.62□□□□□ -1.19
PTCD3-207ENST00000467273 AFF1P51825 1210 aaKnown RBP7.62□□□□□ -1.19
PTCD3-207ENST00000467273 AEBP1Q8IUX7 1158 aa7.62□□□□□ -1.19
PTCD3-207ENST00000467273 LINC00116Q8NCU8 138 aa7.62□□□□□ -1.19
PTCD3-207ENST00000467273 C7orf43Q8WVR3 580 aa7.62□□□□□ -1.19
PTCD3-207ENST00000467273 COG3Q96JB2 828 aa7.62□□□□□ -1.19
PTCD3-207ENST00000467273 RTCBQ9Y3I0 505 aaKnown RBP7.62□□□□□ -1.19
PTCD3-207ENST00000467273 A0A1W2PP64 1363 aa7.61□□□□□ -1.19
PTCD3-207ENST00000467273 ROCK2O75116 1388 aaKnown RBP7.61□□□□□ -1.19
PTCD3-207ENST00000467273 CYP27B1O15528 508 aa7.61□□□□□ -1.19
PTCD3-207ENST00000467273 IREB2P48200 963 aaKnown RBP7.61□□□□□ -1.19
PTCD3-207ENST00000467273 EPHA4P54764 986 aa7.61□□□□□ -1.19
PTCD3-207ENST00000467273 TYRO3Q06418 890 aa7.61□□□□□ -1.19
PTCD3-207ENST00000467273 NBPF6Q5VWK0 638 aa7.61□□□□□ -1.19
PTCD3-207ENST00000467273 PIGBQ92521 554 aa7.61□□□□□ -1.19
PTCD3-207ENST00000467273 NBPF4Q96M43 638 aa7.61□□□□□ -1.19
PTCD3-207ENST00000467273 ANKIB1Q9P2G1 1089 aa7.61□□□□□ -1.19
PTCD3-207ENST00000467273 CARNS1A5YM72 827 aa7.6□□□□□ -1.19
PTCD3-207ENST00000467273 SKIP12755 728 aa7.6□□□□□ -1.19
PTCD3-207ENST00000467273 LMNB1P20700 586 aa7.6□□□□□ -1.19
PTCD3-207ENST00000467273 RGS19P49795 217 aa7.6□□□□□ -1.19
PTCD3-207ENST00000467273 ZNF280CQ8ND82 737 aa7.6□□□□□ -1.19
PTCD3-207ENST00000467273 WFDC12Q8WWY7 111 aa7.6□□□□□ -1.19
PTCD3-207ENST00000467273 NAGPAQ9UK23 515 aa7.6□□□□□ -1.19
PTCD3-207ENST00000467273 HCN4Q9Y3Q4 1203 aa7.6□□□□□ -1.19
PTCD3-207ENST00000467273 NCAPD2Q15021 1401 aa7.6□□□□□ -1.19
PTCD3-207ENST00000467273 INSRP06213 1382 aa7.59□□□□□ -1.19
PTCD3-207ENST00000467273 CNTNAP4Q9C0A0 1308 aa7.59□□□□□ -1.19
PTCD3-207ENST00000467273 COL5A3P25940 1745 aaPredicted RBP7.59□□□□□ -1.19
PTCD3-207ENST00000467273 TIAM2Q8IVF5 1701 aa7.59□□□□□ -1.19
PTCD3-207ENST00000467273 FOXN1O15353 648 aa7.59□□□□□ -1.19
PTCD3-207ENST00000467273 RGS9O75916 674 aaPredicted RBP7.59□□□□□ -1.19
PTCD3-207ENST00000467273 GYS1P13807 737 aa7.59□□□□□ -1.19
PTCD3-207ENST00000467273 RFC4P35249 363 aa7.59□□□□□ -1.19
PTCD3-207ENST00000467273 ITPK1Q13572 414 aa7.59□□□□□ -1.19
PTCD3-207ENST00000467273 TMC1Q8TDI8 760 aa7.59□□□□□ -1.19
PTCD3-207ENST00000467273 PHACTR1Q9C0D0 580 aa7.59□□□□□ -1.19
PTCD3-207ENST00000467273 SLC12A5Q9H2X9 1139 aa7.59□□□□□ -1.19
PTCD3-207ENST00000467273 DNAJB12Q9NXW2 375 aaKnown RBP7.59□□□□□ -1.19
PTCD3-207ENST00000467273 TMOD3Q9NYL9 352 aa7.59□□□□□ -1.19
PTCD3-207ENST00000467273 CHMP3Q9Y3E7 222 aa7.59□□□□□ -1.19
PTCD3-207ENST00000467273 KDRP35968 1356 aa7.59□□□□□ -1.2
PTCD3-207ENST00000467273 CNTNAP1P78357 1384 aa7.59□□□□□ -1.2
PTCD3-207ENST00000467273 USP17L3A6NCW0 530 aa7.58□□□□□ -1.2
PTCD3-207ENST00000467273 USP17L4A6NCW7 530 aa7.58□□□□□ -1.2
PTCD3-207ENST00000467273 ATG7O95352 703 aa7.58□□□□□ -1.2
PTCD3-207ENST00000467273 NOS3P29474 1203 aa7.58□□□□□ -1.2
PTCD3-207ENST00000467273 SSTR4P31391 388 aa7.58□□□□□ -1.2
PTCD3-207ENST00000467273 TXKP42681 527 aa7.58□□□□□ -1.2
PTCD3-207ENST00000467273 MLLT1Q03111 559 aaPredicted RBP7.58□□□□□ -1.2
PTCD3-207ENST00000467273 USP17L2Q6R6M4 530 aa7.58□□□□□ -1.2
PTCD3-207ENST00000467273 SMIM5Q71RC9 77 aa7.58□□□□□ -1.2
PTCD3-207ENST00000467273 USP17L1Q7RTZ2 530 aa7.58□□□□□ -1.2
PTCD3-207ENST00000467273 DEPDC4Q8N2C3 294 aa7.58□□□□□ -1.2
PTCD3-207ENST00000467273 NFATC2IPQ8NCF5 419 aa7.58□□□□□ -1.2
PTCD3-207ENST00000467273 SUSD3Q96L08 255 aa7.58□□□□□ -1.2
PTCD3-207ENST00000467273 VRTNQ9H8Y1 702 aa7.58□□□□□ -1.2
PTCD3-207ENST00000467273 SPG7Q9UQ90 795 aa7.58□□□□□ -1.2
PTCD3-207ENST00000467273 FLT4P35916 1363 aa7.58□□□□□ -1.2
PTCD3-207ENST00000467273 DLEC1Q9Y238 1755 aa7.57□□□□□ -1.2
PTCD3-207ENST00000467273 USP17L5A8MUK1 530 aa7.57□□□□□ -1.2
PTCD3-207ENST00000467273 RPS6KA4O75676 772 aa7.57□□□□□ -1.2
PTCD3-207ENST00000467273 PSMA6P60900 246 aaKnown RBP7.57□□□□□ -1.2
PTCD3-207ENST00000467273 PDE4CQ08493 712 aa7.57□□□□□ -1.2
PTCD3-207ENST00000467273 NCOA4Q13772 614 aa7.57□□□□□ -1.2
PTCD3-207ENST00000467273 C1orf53Q5VUE5 145 aa7.57□□□□□ -1.2
PTCD3-207ENST00000467273 ABHD8Q96I13 439 aa7.57□□□□□ -1.2
PTCD3-207ENST00000467273 MEGF10Q96KG7 1140 aa7.57□□□□□ -1.2
PTCD3-207ENST00000467273 PNMA5Q96PV4 448 aa7.57□□□□□ -1.2
PTCD3-207ENST00000467273 USTQ9Y2C2 406 aa7.57□□□□□ -1.2
PTCD3-207ENST00000467273 TONSLQ96HA7 1378 aa7.57□□□□□ -1.2
PTCD3-207ENST00000467273 VIRMAQ69YN4 1812 aaKnown RBP7.57□□□□□ -1.2
PTCD3-207ENST00000467273 PRR23CQ6ZRP0 262 aa7.56□□□□□ -1.2
PTCD3-207ENST00000467273 USHBP1Q8N6Y0 703 aa7.56□□□□□ -1.2
PTCD3-207ENST00000467273 TSPAN10Q9H1Z9 355 aaPredicted RBP7.56□□□□□ -1.2
PTCD3-207ENST00000467273 ASAP1Q9ULH1 1129 aa7.56□□□□□ -1.2
PTCD3-207ENST00000467273 DICER1Q9UPY3 1922 aaKnown RBP7.55□□□□□ -1.2
PTCD3-207ENST00000467273 IRAK1P51617 712 aa7.55□□□□□ -1.2
PTCD3-207ENST00000467273 FAM35AQ86V20 835 aa7.55□□□□□ -1.2
PTCD3-207ENST00000467273 PLEKHM2Q8IWE5 1019 aa7.55□□□□□ -1.2
PTCD3-207ENST00000467273 IFNL2Q8IZJ0 200 aa7.55□□□□□ -1.2
PTCD3-207ENST00000467273 ATG3Q9NT62 314 aa7.55□□□□□ -1.2
PTCD3-207ENST00000467273 MKRN1Q9UHC7 482 aaKnown RBP7.55□□□□□ -1.2
PTCD3-207ENST00000467273 USP42Q9H9J4 1324 aaKnown RBP7.54□□□□□ -1.2
PTCD3-207ENST00000467273 TNRC18O15417 2968 aaPredicted RBP7.54□□□□□ -1.2
PTCD3-207ENST00000467273 CCDC88AQ3V6T2 1871 aa7.54□□□□□ -1.2
PTCD3-207ENST00000467273 TMEM88BA6NKF7 163 aa7.54□□□□□ -1.2
PTCD3-207ENST00000467273 ERVV-2B6SEH9 535 aa7.54□□□□□ -1.2
PTCD3-207ENST00000467273 CPB1P15086 417 aa7.54□□□□□ -1.2
PTCD3-207ENST00000467273 NFKB1P19838 968 aa7.54□□□□□ -1.2
PTCD3-207ENST00000467273 LBX1P52954 281 aa7.54□□□□□ -1.2
PTCD3-207ENST00000467273 MAP2K1Q02750 393 aaPredicted RBP7.54□□□□□ -1.2
PTCD3-207ENST00000467273 RRS1Q15050 365 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms