RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 SPINK5Q9NQ38 1064 aaPredicted RBP16.17■□□□□ 0.18
UBR4-210ENST00000466969 MORF4L1Q9UBU8 362 aa16.17■□□□□ 0.18
UBR4-210ENST00000466969 LRRFIP2Q9Y608 721 aaKnown RBP16.17■□□□□ 0.18
UBR4-210ENST00000466969 USP34Q70CQ2 3546 aa16.16■□□□□ 0.18
UBR4-210ENST00000466969 GRXCR1A8MXD5 290 aa16.16■□□□□ 0.18
UBR4-210ENST00000466969 CLTBP09497 229 aa16.16■□□□□ 0.18
UBR4-210ENST00000466969 PPP2R1AP30153 589 aa16.16■□□□□ 0.18
UBR4-210ENST00000466969 TLE2Q04725 743 aa16.16■□□□□ 0.18
UBR4-210ENST00000466969 LMOD3Q0VAK6 560 aa16.16■□□□□ 0.18
UBR4-210ENST00000466969 SLC28A3Q9HAS3 691 aa16.16■□□□□ 0.18
UBR4-210ENST00000466969 LRRC37A2A6NM11 1700 aa16.16■□□□□ 0.18
UBR4-210ENST00000466969 CHD9Q3L8U1 2897 aa16.16■□□□□ 0.18
UBR4-210ENST00000466969 PHF20L1A8MW92 1017 aa16.15■□□□□ 0.18
UBR4-210ENST00000466969 CHL1O00533 1208 aa16.15■□□□□ 0.18
UBR4-210ENST00000466969 MYCNP04198 464 aaPredicted RBP16.15■□□□□ 0.18
UBR4-210ENST00000466969 MAPK4P31152 587 aa16.15■□□□□ 0.18
UBR4-210ENST00000466969 GYG1P46976 350 aa16.15■□□□□ 0.18
UBR4-210ENST00000466969 CHAF1AQ13111 956 aaPredicted RBP16.15■□□□□ 0.18
UBR4-210ENST00000466969 C1orf53Q5VUE5 145 aa16.15■□□□□ 0.18
UBR4-210ENST00000466969 CCDC174Q6PII3 467 aa16.15■□□□□ 0.18
UBR4-210ENST00000466969 UBE3BQ7Z3V4 1068 aa16.15■□□□□ 0.18
UBR4-210ENST00000466969 ASCC2Q9H1I8 757 aaPredicted RBP16.15■□□□□ 0.18
UBR4-210ENST00000466969 DAGLAQ9Y4D2 1042 aa16.15■□□□□ 0.18
UBR4-210ENST00000466969 MAST3O60307 1309 aa16.15■□□□□ 0.18
UBR4-210ENST00000466969 NEXNQ0ZGT2 675 aa16.14■□□□□ 0.17
UBR4-210ENST00000466969 GPRC5AQ8NFJ5 357 aa16.14■□□□□ 0.17
UBR4-210ENST00000466969 USP6NLQ92738 828 aa16.14■□□□□ 0.17
UBR4-210ENST00000466969 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.14■□□□□ 0.171e-15■□□□□ 10.2
UBR4-210ENST00000466969 CWC22Q9HCG8 908 aaKnown RBP16.14■□□□□ 0.17
UBR4-210ENST00000466969 MAP3K2Q9Y2U5 619 aa16.14■□□□□ 0.17
UBR4-210ENST00000466969 UTYO14607 1347 aa16.14■□□□□ 0.17
UBR4-210ENST00000466969 CACNA1GO43497 2377 aa16.13■□□□□ 0.17
UBR4-210ENST00000466969 KIAA0355O15063 1070 aa16.13■□□□□ 0.17
UBR4-210ENST00000466969 FRAT2O75474 233 aaPredicted RBP16.13■□□□□ 0.17
UBR4-210ENST00000466969 IGKV5-2P06315 115 aa16.13■□□□□ 0.17
UBR4-210ENST00000466969 CSF1RP07333 972 aa16.13■□□□□ 0.17
UBR4-210ENST00000466969 ALADP13716 330 aa16.13■□□□□ 0.17
UBR4-210ENST00000466969 DUSP27Q5VZP5 1158 aa16.13■□□□□ 0.17
UBR4-210ENST00000466969 PLA2G12BQ9BX93 195 aa16.13■□□□□ 0.17
UBR4-210ENST00000466969 CTNND1O60716 968 aaKnown RBP16.12■□□□□ 0.17
UBR4-210ENST00000466969 ADCYAP1R1P41586 468 aa16.12■□□□□ 0.17
UBR4-210ENST00000466969 HHIPL2Q6UWX4 724 aa16.12■□□□□ 0.17
UBR4-210ENST00000466969 VPS37DQ86XT2 251 aa16.12■□□□□ 0.17
UBR4-210ENST00000466969 FERMT2Q96AC1 680 aa16.12■□□□□ 0.17
UBR4-210ENST00000466969 NKX2-4Q9H2Z4 354 aa16.12■□□□□ 0.17
UBR4-210ENST00000466969 TMEM39AQ9NV64 488 aa16.12■□□□□ 0.17
UBR4-210ENST00000466969 H7C1W4 665 aa16.11■□□□□ 0.17
UBR4-210ENST00000466969 GTPBP6O43824 516 aaPredicted RBP16.11■□□□□ 0.17
UBR4-210ENST00000466969 IRX3P78415 501 aaPredicted RBP16.11■□□□□ 0.17
UBR4-210ENST00000466969 IFIT5Q13325 482 aaKnown RBP16.11■□□□□ 0.17
UBR4-210ENST00000466969 MORN1Q5T089 497 aa16.11■□□□□ 0.17
UBR4-210ENST00000466969 GPR142Q7Z601 462 aa16.11■□□□□ 0.17
UBR4-210ENST00000466969 PLEKHH3Q7Z736 793 aa16.11■□□□□ 0.17
UBR4-210ENST00000466969 EDC3Q96F86 508 aaKnown RBP16.11■□□□□ 0.17
UBR4-210ENST00000466969 FAM84BQ96KN1 310 aaPredicted RBP16.11■□□□□ 0.17
UBR4-210ENST00000466969 PHOX2BQ99453 314 aa16.11■□□□□ 0.17
UBR4-210ENST00000466969 CD320Q9NPF0 282 aa16.11■□□□□ 0.17
UBR4-210ENST00000466969 CHD7Q9P2D1 2997 aa16.11■□□□□ 0.17
UBR4-210ENST00000466969 IQSEC3Q9UPP2 1182 aaPredicted RBP16.11■□□□□ 0.17
UBR4-210ENST00000466969 A0A1B0GUL6 1792 aa16.1■□□□□ 0.17
UBR4-210ENST00000466969 NFIAQ12857 509 aa16.1■□□□□ 0.17
UBR4-210ENST00000466969 MAP2K5Q13163 448 aa16.1■□□□□ 0.17
UBR4-210ENST00000466969 CCDC84Q86UT8 332 aaPredicted RBP16.1■□□□□ 0.17
UBR4-210ENST00000466969 HLA-CQ95604 372 aa16.1■□□□□ 0.17
UBR4-210ENST00000466969 HMGCS2P54868 508 aa16.09■□□□□ 0.17
UBR4-210ENST00000466969 ATP2B2Q01814 1243 aa16.09■□□□□ 0.17
UBR4-210ENST00000466969 SPP2Q13103 211 aa16.09■□□□□ 0.17
UBR4-210ENST00000466969 UBE4AQ14139 1066 aa16.09■□□□□ 0.17
UBR4-210ENST00000466969 CWF19L2Q2TBE0 894 aaKnown RBP16.09■□□□□ 0.17
UBR4-210ENST00000466969 SLC44A5Q8NCS7 719 aa16.09■□□□□ 0.17
UBR4-210ENST00000466969 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.09■□□□□ 0.17
UBR4-210ENST00000466969 SUGT1Q9Y2Z0 365 aa16.09■□□□□ 0.17
UBR4-210ENST00000466969 PHIPQ8WWQ0 1821 aa16.09■□□□□ 0.17
UBR4-210ENST00000466969 NEURL1BA8MQ27 555 aa16.08■□□□□ 0.16
UBR4-210ENST00000466969 PQBP1O60828 265 aaKnown RBP16.08■□□□□ 0.16
UBR4-210ENST00000466969 CDC42EP5Q6NZY7 148 aa16.08■□□□□ 0.16
UBR4-210ENST00000466969 CNNM1Q9NRU3 951 aa16.08■□□□□ 0.16
UBR4-210ENST00000466969 FLRT1Q9NZU1 646 aa16.08■□□□□ 0.16
UBR4-210ENST00000466969 CHMP3Q9Y3E7 222 aa16.08■□□□□ 0.16
UBR4-210ENST00000466969 CACNA1BQ00975 2339 aa16.08■□□□□ 0.16
UBR4-210ENST00000466969 DOCK1Q14185 1865 aa16.08■□□□□ 0.16
UBR4-210ENST00000466969 C5orf42Q9H799 3197 aa16.07■□□□□ 0.16
UBR4-210ENST00000466969 PEX10O60683 326 aa16.07■□□□□ 0.16
UBR4-210ENST00000466969 GLRX3O76003 335 aaKnown RBP16.07■□□□□ 0.16
UBR4-210ENST00000466969 PPIGQ13427 754 aaKnown RBP eCLIP16.07■□□□□ 0.169e-17■■□□□ 12.6
UBR4-210ENST00000466969 TAF7LQ5H9L4 462 aa16.07■□□□□ 0.16
UBR4-210ENST00000466969 TMEM240Q5SV17 173 aa16.07■□□□□ 0.16
UBR4-210ENST00000466969 KSR2Q6VAB6 950 aa16.07■□□□□ 0.16
UBR4-210ENST00000466969 LDHAL6AQ6ZMR3 332 aa16.07■□□□□ 0.16
UBR4-210ENST00000466969 ERMP1Q7Z2K6 904 aa16.07■□□□□ 0.16
UBR4-210ENST00000466969 ZSCAN29Q8IWY8 852 aaPredicted RBP16.07■□□□□ 0.16
UBR4-210ENST00000466969 GJD3Q8N144 294 aa16.07■□□□□ 0.16
UBR4-210ENST00000466969 ZNF280CQ8ND82 737 aa16.07■□□□□ 0.16
UBR4-210ENST00000466969 PORCNQ9H237 461 aa16.07■□□□□ 0.16
UBR4-210ENST00000466969 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.07■□□□□ 0.16
UBR4-210ENST00000466969 TXNRD2Q9NNW7 524 aa16.07■□□□□ 0.16
UBR4-210ENST00000466969 FAM198AQ9UFP1 575 aa16.07■□□□□ 0.16
UBR4-210ENST00000466969 PRRC2BQ5JSZ5 2229 aaKnown RBP16.07■□□□□ 0.16
UBR4-210ENST00000466969 SPTBN4Q9H254 2564 aa16.06■□□□□ 0.16
UBR4-210ENST00000466969 ATRNL1Q5VV63 1379 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms