RNA–Protein interactions for RNA: ENST00000466742.5

ABCF3-206, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 2,331 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-206ENST00000466742 GBP6Q6ZN66 633 aa17.7■□□□□ 0.42
ABCF3-206ENST00000466742 GIMAP7Q8NHV1 300 aa17.7■□□□□ 0.42
ABCF3-206ENST00000466742 LSG1Q9H089 658 aaKnown RBP17.7■□□□□ 0.42
ABCF3-206ENST00000466742 BOLA2Q9H3K6 86 aa17.7■□□□□ 0.42
ABCF3-206ENST00000466742 BCORQ6W2J9 1755 aa17.69■□□□□ 0.42
ABCF3-206ENST00000466742 ZNF609O15014 1411 aa17.69■□□□□ 0.42
ABCF3-206ENST00000466742 RIPOR2Q9Y4F9 1068 aa17.69■□□□□ 0.42
ABCF3-206ENST00000466742 POTEB2H3BUK9 544 aa17.69■□□□□ 0.42
ABCF3-206ENST00000466742 ERCC3P19447 782 aa17.69■□□□□ 0.42
ABCF3-206ENST00000466742 CEP57L1Q8IYX8 460 aa17.69■□□□□ 0.42
ABCF3-206ENST00000466742 HIP1O00291 1037 aa17.68■□□□□ 0.42
ABCF3-206ENST00000466742 TULP1O00294 542 aaPredicted RBP17.68■□□□□ 0.42
ABCF3-206ENST00000466742 LDHAL6AQ6ZMR3 332 aa17.68■□□□□ 0.42
ABCF3-206ENST00000466742 AOPEPQ8N6M6 819 aa17.68■□□□□ 0.42
ABCF3-206ENST00000466742 NAT10Q9H0A0 1025 aaKnown RBP17.68■□□□□ 0.42
ABCF3-206ENST00000466742 RTL9Q8NET4 1388 aa17.68■□□□□ 0.42
ABCF3-206ENST00000466742 ZSCAN12O43309 604 aa17.67■□□□□ 0.42
ABCF3-206ENST00000466742 TIMM10P62072 90 aa17.67■□□□□ 0.42
ABCF3-206ENST00000466742 SETQ01105 290 aaPredicted RBP17.67■□□□□ 0.42
ABCF3-206ENST00000466742 NEDD9Q14511 834 aa17.67■□□□□ 0.42
ABCF3-206ENST00000466742 NEUROD6Q96NK8 337 aa17.67■□□□□ 0.42
ABCF3-206ENST00000466742 XPO4Q9C0E2 1151 aaKnown RBP17.67■□□□□ 0.42
ABCF3-206ENST00000466742 VWA3AA6NCI4 1184 aa17.67■□□□□ 0.42
ABCF3-206ENST00000466742 ERLIN1O75477 346 aa17.67■□□□□ 0.42
ABCF3-206ENST00000466742 ELF1P32519 619 aa17.67■□□□□ 0.42
ABCF3-206ENST00000466742 LIG3P49916 1009 aa17.67■□□□□ 0.42
ABCF3-206ENST00000466742 BIRC2Q13490 618 aa17.67■□□□□ 0.42
ABCF3-206ENST00000466742 ME3Q16798 604 aa17.67■□□□□ 0.42
ABCF3-206ENST00000466742 HSP90B2PQ58FF3 399 aa17.67■□□□□ 0.42
ABCF3-206ENST00000466742 SLC27A3Q5K4L6 730 aa17.67■□□□□ 0.42
ABCF3-206ENST00000466742 USPL1Q5W0Q7 1092 aa17.67■□□□□ 0.42
ABCF3-206ENST00000466742 HOMEZQ8IX15 550 aa17.67■□□□□ 0.42
ABCF3-206ENST00000466742 RUFY2Q8WXA3 655 aa17.67■□□□□ 0.42
ABCF3-206ENST00000466742 DDX11Q96FC9 970 aa17.67■□□□□ 0.42
ABCF3-206ENST00000466742 HAUS7Q99871 368 aa17.67■□□□□ 0.42
ABCF3-206ENST00000466742 TM6SF1Q9BZW5 370 aa17.67■□□□□ 0.42
ABCF3-206ENST00000466742 BSDC1Q9NW68 430 aaPredicted RBP17.67■□□□□ 0.42
ABCF3-206ENST00000466742 SH3BP1Q9Y3L3 701 aa17.67■□□□□ 0.42
ABCF3-206ENST00000466742 ZPR1O75312 459 aa17.66■□□□□ 0.42
ABCF3-206ENST00000466742 FBXW10Q5XX13 1052 aa17.66■□□□□ 0.42
ABCF3-206ENST00000466742 FAM43BQ6ZT52 329 aaPredicted RBP17.66■□□□□ 0.42
ABCF3-206ENST00000466742 POTEDQ86YR6 584 aa17.66■□□□□ 0.42
ABCF3-206ENST00000466742 PRPF38AQ8NAV1 312 aaKnown RBP17.66■□□□□ 0.42
ABCF3-206ENST00000466742 MSANTD4Q8NCY6 345 aa17.66■□□□□ 0.42
ABCF3-206ENST00000466742 PLEKHA4Q9H4M7 779 aa17.66■□□□□ 0.42
ABCF3-206ENST00000466742 LRRC4BQ9NT99 713 aa17.66■□□□□ 0.42
ABCF3-206ENST00000466742 MCM8Q9UJA3 840 aa17.66■□□□□ 0.42
ABCF3-206ENST00000466742 SCN7AQ01118 1682 aa17.66■□□□□ 0.42
ABCF3-206ENST00000466742 RIC1Q4ADV7 1423 aa17.66■□□□□ 0.42
ABCF3-206ENST00000466742 CCDC152Q4G0S7 254 aa17.66■□□□□ 0.42
ABCF3-206ENST00000466742 ARHGEF1Q92888 912 aaKnown RBP17.66■□□□□ 0.42
ABCF3-206ENST00000466742 ZSWIM6Q9HCJ5 1215 aa17.66■□□□□ 0.42
ABCF3-206ENST00000466742 DTNBO60941 627 aa17.65■□□□□ 0.42
ABCF3-206ENST00000466742 CPA1P15085 419 aa17.65■□□□□ 0.42
ABCF3-206ENST00000466742 IRX1P78414 480 aaPredicted RBP17.65■□□□□ 0.42
ABCF3-206ENST00000466742 SCRN1Q12765 414 aa17.65■□□□□ 0.42
ABCF3-206ENST00000466742 TBC1D9BQ66K14 1250 aa17.65■□□□□ 0.42
ABCF3-206ENST00000466742 AMIGO3Q86WK7 504 aa17.65■□□□□ 0.42
ABCF3-206ENST00000466742 FAM204AQ9H8W3 233 aa17.65■□□□□ 0.42
ABCF3-206ENST00000466742 ANKZF1Q9H8Y5 726 aa17.65■□□□□ 0.42
ABCF3-206ENST00000466742 GOLGA6L9A6NEM1 432 aa17.65■□□□□ 0.42
ABCF3-206ENST00000466742 ADRA2BP18089 450 aa17.65■□□□□ 0.42
ABCF3-206ENST00000466742 SMIM5Q71RC9 77 aa17.65■□□□□ 0.42
ABCF3-206ENST00000466742 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.65■□□□□ 0.42
ABCF3-206ENST00000466742 BPIFA3Q9BQP9 254 aa17.65■□□□□ 0.42
ABCF3-206ENST00000466742 JPH2Q9BR39 696 aaPredicted RBP17.65■□□□□ 0.42
ABCF3-206ENST00000466742 CNNM1Q9NRU3 951 aa17.65■□□□□ 0.42
ABCF3-206ENST00000466742 IFNKQ9P0W0 207 aa17.65■□□□□ 0.42
ABCF3-206ENST00000466742 SRP68Q9UHB9 627 aaKnown RBP17.65■□□□□ 0.42
ABCF3-206ENST00000466742 RFX7Q2KHR2 1363 aa17.65■□□□□ 0.42
ABCF3-206ENST00000466742 C4BP0C0L5 1744 aa17.64■□□□□ 0.42
ABCF3-206ENST00000466742 TRIM37O94972 964 aa17.64■□□□□ 0.41
ABCF3-206ENST00000466742 TUBB4BP68371 445 aa17.64■□□□□ 0.41
ABCF3-206ENST00000466742 SEMA3FQ13275 785 aa17.64■□□□□ 0.41
ABCF3-206ENST00000466742 METTL24Q5JXM2 366 aa17.64■□□□□ 0.41
ABCF3-206ENST00000466742 TRAPPC3LQ5T215 181 aa17.64■□□□□ 0.41
ABCF3-206ENST00000466742 CPLX2Q6PUV4 134 aaKnown RBP17.64■□□□□ 0.41
ABCF3-206ENST00000466742 TICAM2Q86XR7 235 aa17.64■□□□□ 0.41
ABCF3-206ENST00000466742 VGLL2Q8N8G2 317 aa17.64■□□□□ 0.41
ABCF3-206ENST00000466742 KIFC2Q96AC6 838 aa17.64■□□□□ 0.41
ABCF3-206ENST00000466742 FSD1Q9BTV5 496 aa17.64■□□□□ 0.41
ABCF3-206ENST00000466742 LRP5O75197 1615 aa17.64■□□□□ 0.41
ABCF3-206ENST00000466742 H0YHG0 523 aa17.64■□□□□ 0.41
ABCF3-206ENST00000466742 HMGB2P26583 209 aaKnown RBP17.64■□□□□ 0.41
ABCF3-206ENST00000466742 SARNPP82979 210 aaKnown RBP17.64■□□□□ 0.41
ABCF3-206ENST00000466742 SLC10A5Q5PT55 438 aa17.64■□□□□ 0.41
ABCF3-206ENST00000466742 WDR24Q96S15 920 aa17.64■□□□□ 0.41
ABCF3-206ENST00000466742 ACBD3Q9H3P7 528 aa17.64■□□□□ 0.41
ABCF3-206ENST00000466742 VEZTQ9HBM0 779 aa17.64■□□□□ 0.41
ABCF3-206ENST00000466742 SNRKQ9NRH2 765 aa17.64■□□□□ 0.41
ABCF3-206ENST00000466742 FAM169AQ9Y6X4 670 aa17.64■□□□□ 0.41
ABCF3-206ENST00000466742 INHBEP58166 350 aa17.63■□□□□ 0.41
ABCF3-206ENST00000466742 NECAB1Q8N987 351 aa17.63■□□□□ 0.41
ABCF3-206ENST00000466742 CABS1Q96KC9 395 aa17.63■□□□□ 0.41
ABCF3-206ENST00000466742 SETDB2Q96T68 719 aa17.63■□□□□ 0.41
ABCF3-206ENST00000466742 NYXQ9GZU5 481 aa17.63■□□□□ 0.41
ABCF3-206ENST00000466742 CYP46A1Q9Y6A2 500 aa17.63■□□□□ 0.41
ABCF3-206ENST00000466742 MYH3P11055 1940 aa17.63■□□□□ 0.41
ABCF3-206ENST00000466742 TAF1LQ8IZX4 1826 aa17.63■□□□□ 0.41
ABCF3-206ENST00000466742 ANKRD33BA6NCL7 494 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms