RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 MORF4L1Q9UBU8 362 aa18.53■□□□□ 0.56
HMGXB4-206ENST00000466438 KIF16BQ96L93 1317 aa18.52■□□□□ 0.56
HMGXB4-206ENST00000466438 ENTPD3O75355 529 aa18.52■□□□□ 0.56
HMGXB4-206ENST00000466438 METTL24Q5JXM2 366 aa18.52■□□□□ 0.56
HMGXB4-206ENST00000466438 CCDC84Q86UT8 332 aaPredicted RBP18.52■□□□□ 0.56
HMGXB4-206ENST00000466438 FRMPD3Q5JV73 1810 aa18.51■□□□□ 0.55
HMGXB4-206ENST00000466438 PDE8BO95263 885 aa18.51■□□□□ 0.55
HMGXB4-206ENST00000466438 RGS3P49796 1198 aa18.51■□□□□ 0.55
HMGXB4-206ENST00000466438 VGLL2Q8N8G2 317 aa18.51■□□□□ 0.55
HMGXB4-206ENST00000466438 IDI2Q9BXS1 227 aa18.51■□□□□ 0.55
HMGXB4-206ENST00000466438 ASCC2Q9H1I8 757 aaPredicted RBP18.51■□□□□ 0.55
HMGXB4-206ENST00000466438 SH3BP5LQ7L8J4 393 aa18.5■□□□□ 0.55
HMGXB4-206ENST00000466438 ZSCAN29Q8IWY8 852 aaPredicted RBP18.5■□□□□ 0.55
HMGXB4-206ENST00000466438 MYH13Q9UKX3 1938 aa18.5■□□□□ 0.55
HMGXB4-206ENST00000466438 CACNA1FO60840 1977 aa18.5■□□□□ 0.55
HMGXB4-206ENST00000466438 F6X3S4 739 aa18.49■□□□□ 0.55
HMGXB4-206ENST00000466438 ATN1P54259 1190 aaPredicted RBP18.49■□□□□ 0.55
HMGXB4-206ENST00000466438 RTP1P59025 263 aa18.49■□□□□ 0.55
HMGXB4-206ENST00000466438 PDE3AQ14432 1141 aa18.49■□□□□ 0.55
HMGXB4-206ENST00000466438 C9orf78Q9NZ63 289 aaPredicted RBP18.49■□□□□ 0.55
HMGXB4-206ENST00000466438 RFX7Q2KHR2 1363 aa18.49■□□□□ 0.55
HMGXB4-206ENST00000466438 PRDX5P30044 214 aa18.48■□□□□ 0.55
HMGXB4-206ENST00000466438 HMGCS2P54868 508 aa18.48■□□□□ 0.55
HMGXB4-206ENST00000466438 SPP2Q13103 211 aa18.48■□□□□ 0.55
HMGXB4-206ENST00000466438 LRRC24Q50LG9 513 aa18.48■□□□□ 0.55
HMGXB4-206ENST00000466438 MIER1Q8N108 512 aa18.48■□□□□ 0.55
HMGXB4-206ENST00000466438 ZNF280CQ8ND82 737 aa18.48■□□□□ 0.55
HMGXB4-206ENST00000466438 ATXN2LQ8WWM7 1075 aaKnown RBP18.48■□□□□ 0.55
HMGXB4-206ENST00000466438 USP6NLQ92738 828 aa18.48■□□□□ 0.55
HMGXB4-206ENST00000466438 TBC1D2Q9BYX2 928 aa18.48■□□□□ 0.55
HMGXB4-206ENST00000466438 IFIT1P09914 478 aaKnown RBP18.47■□□□□ 0.55
HMGXB4-206ENST00000466438 SLURP2P0DP57 97 aa18.47■□□□□ 0.55
HMGXB4-206ENST00000466438 RGS2P41220 211 aa18.47■□□□□ 0.55
HMGXB4-206ENST00000466438 CCL14Q16627 93 aa18.47■□□□□ 0.55
HMGXB4-206ENST00000466438 SYNGAP1Q96PV0 1343 aa18.47■□□□□ 0.55
HMGXB4-206ENST00000466438 DDTLA6NHG4 134 aaPredicted RBP18.46■□□□□ 0.55
HMGXB4-206ENST00000466438 LDHBP07195 334 aaKnown RBP18.46■□□□□ 0.55
HMGXB4-206ENST00000466438 MAPK4P31152 587 aa18.46■□□□□ 0.55
HMGXB4-206ENST00000466438 PUM3Q15397 648 aaKnown RBP18.46■□□□□ 0.55
HMGXB4-206ENST00000466438 ADAMTS19Q8TE59 1207 aa18.46■□□□□ 0.55
HMGXB4-206ENST00000466438 BADQ92934 168 aa18.46■□□□□ 0.55
HMGXB4-206ENST00000466438 APBA2Q99767 749 aa18.46■□□□□ 0.55
HMGXB4-206ENST00000466438 DNM1LO00429 736 aa18.45■□□□□ 0.54
HMGXB4-206ENST00000466438 FGFR2P21802 821 aa18.45■□□□□ 0.54
HMGXB4-206ENST00000466438 IRX3P78415 501 aaPredicted RBP18.45■□□□□ 0.54
HMGXB4-206ENST00000466438 GRIN2CQ14957 1233 aa18.45■□□□□ 0.54
HMGXB4-206ENST00000466438 SH3D19Q5HYK7 790 aa18.45■□□□□ 0.54
HMGXB4-206ENST00000466438 GPRC5AQ8NFJ5 357 aa18.45■□□□□ 0.54
HMGXB4-206ENST00000466438 KAZALD1Q96I82 304 aa18.45■□□□□ 0.54
HMGXB4-206ENST00000466438 SUCLG2Q96I99 432 aa18.45■□□□□ 0.54
HMGXB4-206ENST00000466438 ASB2Q96Q27 587 aa18.45■□□□□ 0.54
HMGXB4-206ENST00000466438 ATP11BQ9Y2G3 1177 aa18.45■□□□□ 0.54
HMGXB4-206ENST00000466438 ARIH1Q9Y4X5 557 aaPredicted RBP18.45■□□□□ 0.54
HMGXB4-206ENST00000466438 TBC1D12O60347 775 aa18.44■□□□□ 0.54
HMGXB4-206ENST00000466438 MSCO60682 206 aa18.44■□□□□ 0.54
HMGXB4-206ENST00000466438 MORN1Q5T089 497 aa18.44■□□□□ 0.54
HMGXB4-206ENST00000466438 LPAR1Q92633 364 aa18.44■□□□□ 0.54
HMGXB4-206ENST00000466438 UHRF1Q96T88 793 aaPredicted RBP18.44■□□□□ 0.54
HMGXB4-206ENST00000466438 OSBPL5Q9H0X9 879 aaPredicted RBP18.44■□□□□ 0.54
HMGXB4-206ENST00000466438 TXNRD2Q9NNW7 524 aa18.44■□□□□ 0.54
HMGXB4-206ENST00000466438 PRDM5Q9NQX1 630 aaPredicted RBP18.44■□□□□ 0.54
HMGXB4-206ENST00000466438 THEGQ9P2T0 379 aa18.44■□□□□ 0.54
HMGXB4-206ENST00000466438 DDX20Q9UHI6 824 aaKnown RBP18.44■□□□□ 0.54
HMGXB4-206ENST00000466438 NCOR1O75376 2440 aa18.44■□□□□ 0.54
HMGXB4-206ENST00000466438 BDP1A6H8Y1 2624 aa18.44■□□□□ 0.54
HMGXB4-206ENST00000466438 GAKO14976 1311 aa18.43■□□□□ 0.54
HMGXB4-206ENST00000466438 ALDH1L1O75891 902 aa18.42■□□□□ 0.54
HMGXB4-206ENST00000466438 RABL6Q3YEC7 729 aaPredicted RBP18.42■□□□□ 0.54
HMGXB4-206ENST00000466438 GPR142Q7Z601 462 aa18.42■□□□□ 0.54
HMGXB4-206ENST00000466438 CCAR1Q8IX12 1150 aaKnown RBP18.42■□□□□ 0.54
HMGXB4-206ENST00000466438 RNPC3Q96LT9 517 aaKnown RBP18.42■□□□□ 0.54
HMGXB4-206ENST00000466438 C1QTNF1Q9BXJ1 281 aa18.42■□□□□ 0.54
HMGXB4-206ENST00000466438 DDX4Q9NQI0 724 aaKnown RBP18.42■□□□□ 0.54
HMGXB4-206ENST00000466438 RLFQ13129 1914 aa18.42■□□□□ 0.54
HMGXB4-206ENST00000466438 SALL1Q9NSC2 1324 aa18.42■□□□□ 0.54
HMGXB4-206ENST00000466438 PEX10O60683 326 aa18.41■□□□□ 0.54
HMGXB4-206ENST00000466438 SLC5A1P13866 664 aa18.41■□□□□ 0.54
HMGXB4-206ENST00000466438 HOXA7P31268 230 aaPredicted RBP18.41■□□□□ 0.54
HMGXB4-206ENST00000466438 HERVK_113P62684 666 aa18.41■□□□□ 0.54
HMGXB4-206ENST00000466438 PICALMQ13492 652 aa18.41■□□□□ 0.54
HMGXB4-206ENST00000466438 MFSD14CQ5VZR4 134 aa18.41■□□□□ 0.54
HMGXB4-206ENST00000466438 PLEKHH3Q7Z736 793 aa18.41■□□□□ 0.54
HMGXB4-206ENST00000466438 P2RX7Q99572 595 aaKnown RBP18.41■□□□□ 0.54
HMGXB4-206ENST00000466438 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.41■□□□□ 0.54
HMGXB4-206ENST00000466438 PDLIM7Q9NR12 457 aa18.41■□□□□ 0.54
HMGXB4-206ENST00000466438 ATAD5Q96QE3 1844 aa18.4■□□□□ 0.54
HMGXB4-206ENST00000466438 FAM196BA6NMK8 535 aa18.4■□□□□ 0.54
HMGXB4-206ENST00000466438 USP17L5A8MUK1 530 aa18.4■□□□□ 0.54
HMGXB4-206ENST00000466438 DNAJB2P25686 324 aa18.4■□□□□ 0.54
HMGXB4-206ENST00000466438 ERVK-9P63128 1117 aa18.4■□□□□ 0.54
HMGXB4-206ENST00000466438 ERVK-24P63145 666 aa18.4■□□□□ 0.54
HMGXB4-206ENST00000466438 MRPS5P82675 430 aaKnown RBP18.4■□□□□ 0.54
HMGXB4-206ENST00000466438 SLC39A5Q6ZMH5 540 aa18.4■□□□□ 0.54
HMGXB4-206ENST00000466438 LPIN2Q92539 896 aa18.4■□□□□ 0.54
HMGXB4-206ENST00000466438 PORCNQ9H237 461 aa18.4■□□□□ 0.54
HMGXB4-206ENST00000466438 BICC1Q9H694 974 aaKnown RBP18.4■□□□□ 0.54
HMGXB4-206ENST00000466438 AS3MTQ9HBK9 375 aa18.4■□□□□ 0.54
HMGXB4-206ENST00000466438 RBPJLQ9UBG7 517 aa18.4■□□□□ 0.54
HMGXB4-206ENST00000466438 MYH2Q9UKX2 1941 aa18.4■□□□□ 0.54
HMGXB4-206ENST00000466438 UTYO14607 1347 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms