RNA–Protein interactions for RNA: ENST00000466391.1

LSG1-206, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 791 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-206ENST00000466391 MSL1Q68DK7 614 aa10.63□□□□□ -0.71
LSG1-206ENST00000466391 HDGFL2Q7Z4V5 671 aaPredicted RBP10.63□□□□□ -0.71
LSG1-206ENST00000466391 WFDC8Q8IUA0 241 aa10.63□□□□□ -0.71
LSG1-206ENST00000466391 DMRTC2Q8IXT2 367 aaPredicted RBP10.63□□□□□ -0.71
LSG1-206ENST00000466391 CCDC146Q8IYE0 955 aa10.63□□□□□ -0.71
LSG1-206ENST00000466391 ASAP3Q8TDY4 903 aa10.63□□□□□ -0.71
LSG1-206ENST00000466391 FBF1Q8TES7 1133 aa10.63□□□□□ -0.71
LSG1-206ENST00000466391 TRIM11Q96F44 468 aa10.63□□□□□ -0.71
LSG1-206ENST00000466391 CRBNQ96SW2 442 aa10.63□□□□□ -0.71
LSG1-206ENST00000466391 PLVAPQ9BX97 442 aa10.63□□□□□ -0.71
LSG1-206ENST00000466391 CPSF1Q10570 1443 aaKnown RBP10.63□□□□□ -0.71
LSG1-206ENST00000466391 MON2Q7Z3U7 1717 aa10.63□□□□□ -0.71
LSG1-206ENST00000466391 KDM2BQ8NHM5 1336 aa10.62□□□□□ -0.71
LSG1-206ENST00000466391 PIK3R2O00459 728 aa10.62□□□□□ -0.71
LSG1-206ENST00000466391 PTPRAP18433 802 aa10.62□□□□□ -0.71
LSG1-206ENST00000466391 TRAPPC3LQ5T215 181 aa10.62□□□□□ -0.71
LSG1-206ENST00000466391 FBXO33Q7Z6M2 555 aa10.62□□□□□ -0.71
LSG1-206ENST00000466391 FBXO41Q8TF61 875 aa10.62□□□□□ -0.71
LSG1-206ENST00000466391 STK26Q9P289 416 aa10.62□□□□□ -0.71
LSG1-206ENST00000466391 TMEM2Q9UHN6 1383 aa10.62□□□□□ -0.71
LSG1-206ENST00000466391 AKAP12Q02952 1782 aa10.62□□□□□ -0.71
LSG1-206ENST00000466391 EDC4Q6P2E9 1401 aaKnown RBP10.61□□□□□ -0.71
LSG1-206ENST00000466391 FAM177BA6PVY3 158 aa10.61□□□□□ -0.71
LSG1-206ENST00000466391 METTL12A8MUP2 240 aa10.61□□□□□ -0.71
LSG1-206ENST00000466391 FYB1O15117 783 aa10.61□□□□□ -0.71
LSG1-206ENST00000466391 CT47B1P0C2W7 299 aaPredicted RBP10.61□□□□□ -0.71
LSG1-206ENST00000466391 TAGLNQ01995 201 aaKnown RBP10.61□□□□□ -0.71
LSG1-206ENST00000466391 PDE3AQ14432 1141 aa10.61□□□□□ -0.71
LSG1-206ENST00000466391 TCF12Q99081 682 aa10.61□□□□□ -0.71
LSG1-206ENST00000466391 CDK19Q9BWU1 502 aa10.61□□□□□ -0.71
LSG1-206ENST00000466391 BCL2L13Q9BXK5 485 aa10.61□□□□□ -0.71
LSG1-206ENST00000466391 SUV39H2Q9H5I1 410 aa10.61□□□□□ -0.71
LSG1-206ENST00000466391 SH2B1Q9NRF2 756 aaPredicted RBP10.61□□□□□ -0.71
LSG1-206ENST00000466391 SLIT1O75093 1534 aa10.6□□□□□ -0.71
LSG1-206ENST00000466391 PLIN1O60240 522 aa10.6□□□□□ -0.71
LSG1-206ENST00000466391 PRPF40AO75400 957 aaKnown RBP10.6□□□□□ -0.71
LSG1-206ENST00000466391 CDC27P30260 824 aa10.6□□□□□ -0.71
LSG1-206ENST00000466391 CDC25BP30305 580 aa10.6□□□□□ -0.71
LSG1-206ENST00000466391 BAG6P46379 1132 aa10.6□□□□□ -0.71
LSG1-206ENST00000466391 GRM2Q14416 872 aa10.6□□□□□ -0.71
LSG1-206ENST00000466391 CENPQQ7L2Z9 268 aaPredicted RBP10.6□□□□□ -0.71
LSG1-206ENST00000466391 CCNJLQ8IV13 435 aa10.6□□□□□ -0.71
LSG1-206ENST00000466391 TCP11L2Q8N4U5 519 aa10.6□□□□□ -0.71
LSG1-206ENST00000466391 DUSP9Q99956 384 aaKnown RBP10.6□□□□□ -0.71
LSG1-206ENST00000466391 BHLHE41Q9C0J9 482 aaPredicted RBP10.6□□□□□ -0.71
LSG1-206ENST00000466391 PLEKHG1Q9ULL1 1385 aa10.6□□□□□ -0.71
LSG1-206ENST00000466391 ARHGAP23Q9P227 1491 aa10.6□□□□□ -0.71
LSG1-206ENST00000466391 TOPAZ1Q8N9V7 1692 aa10.6□□□□□ -0.71
LSG1-206ENST00000466391 IL16Q14005 1332 aa10.59□□□□□ -0.71
LSG1-206ENST00000466391 ADAMTS13Q76LX8 1427 aa10.59□□□□□ -0.71
LSG1-206ENST00000466391 FGD1P98174 961 aa10.59□□□□□ -0.71
LSG1-206ENST00000466391 CACTIN-AS1Q8N1I8 211 aa10.59□□□□□ -0.71
LSG1-206ENST00000466391 BCO2Q9BYV7 579 aa10.59□□□□□ -0.71
LSG1-206ENST00000466391 RNF19AQ9NV58 838 aa10.59□□□□□ -0.71
LSG1-206ENST00000466391 METP08581 1390 aa10.59□□□□□ -0.71
LSG1-206ENST00000466391 AATKQ6ZMQ8 1374 aa10.59□□□□□ -0.71
LSG1-206ENST00000466391 DIP2AQ14689 1571 aa10.59□□□□□ -0.71
LSG1-206ENST00000466391 C3P01024 1663 aa10.59□□□□□ -0.71
LSG1-206ENST00000466391 ITSN1Q15811 1721 aa10.58□□□□□ -0.72
LSG1-206ENST00000466391 CDK12Q9NYV4 1490 aaPredicted RBP10.58□□□□□ -0.72
LSG1-206ENST00000466391 GRIA4P48058 902 aa10.58□□□□□ -0.72
LSG1-206ENST00000466391 SAFB2Q14151 953 aaKnown RBP eCLIP10.58□□□□□ -0.72
LSG1-206ENST00000466391 SPRED3Q2MJR0 410 aa10.58□□□□□ -0.72
LSG1-206ENST00000466391 C20orf194Q5TEA3 1177 aa10.58□□□□□ -0.72
LSG1-206ENST00000466391 NXPE4Q6UWF7 544 aa10.58□□□□□ -0.72
LSG1-206ENST00000466391 GIPC2Q8TF65 315 aa10.58□□□□□ -0.72
LSG1-206ENST00000466391 BSNDQ8WZ55 320 aa10.58□□□□□ -0.72
LSG1-206ENST00000466391 PLEKHF1Q96S99 279 aa10.58□□□□□ -0.72
LSG1-206ENST00000466391 ADAM19Q9H013 955 aa10.58□□□□□ -0.72
LSG1-206ENST00000466391 PNNQ9H307 717 aaKnown RBP10.58□□□□□ -0.72
LSG1-206ENST00000466391 PPME1Q9Y570 386 aa10.58□□□□□ -0.72
LSG1-206ENST00000466391 NRKQ7Z2Y5 1582 aa10.57□□□□□ -0.72
LSG1-206ENST00000466391 LINC01387J3KSC0 135 aa10.57□□□□□ -0.72
LSG1-206ENST00000466391 EPHA1P21709 976 aa10.57□□□□□ -0.72
LSG1-206ENST00000466391 TXNDC11Q6PKC3 985 aa10.57□□□□□ -0.72
LSG1-206ENST00000466391 MYH16Q9H6N6 1097 aa10.57□□□□□ -0.72
LSG1-206ENST00000466391 NOP53Q9NZM5 478 aaKnown RBP10.57□□□□□ -0.72
LSG1-206ENST00000466391 SPG7Q9UQ90 795 aa10.57□□□□□ -0.72
LSG1-206ENST00000466391 A0A096LPE4 126 aa10.56□□□□□ -0.72
LSG1-206ENST00000466391 A0A1W2PPZ6 126 aa10.56□□□□□ -0.72
LSG1-206ENST00000466391 SPDYE3A6NKU9 549 aa10.56□□□□□ -0.72
LSG1-206ENST00000466391 FAM229AH3BQW9 127 aa10.56□□□□□ -0.72
LSG1-206ENST00000466391 RGS22Q8NE09 1264 aa10.56□□□□□ -0.72
LSG1-206ENST00000466391 GLIS3Q8NEA6 775 aa10.56□□□□□ -0.72
LSG1-206ENST00000466391 OSBPL7Q9BZF2 842 aa10.56□□□□□ -0.72
LSG1-206ENST00000466391 MUC3BQ9H195 1237 aa10.56□□□□□ -0.72
LSG1-206ENST00000466391 PARP2Q9UGN5 583 aa10.56□□□□□ -0.72
LSG1-206ENST00000466391 SOX13Q9UN79 622 aa10.56□□□□□ -0.72
LSG1-206ENST00000466391 PPIP5K1Q6PFW1 1433 aa10.56□□□□□ -0.72
LSG1-206ENST00000466391 RIMS1Q86UR5 1692 aaKnown RBP10.55□□□□□ -0.72
LSG1-206ENST00000466391 TMEM238LA0A1B0GVL6 79 aa10.55□□□□□ -0.72
LSG1-206ENST00000466391 U2AF1L5P0DN76 240 aaPredicted RBP10.55□□□□□ -0.72
LSG1-206ENST00000466391 TNNT2P45379 298 aaPredicted RBP10.55□□□□□ -0.72
LSG1-206ENST00000466391 CABP4P57796 275 aa10.55□□□□□ -0.72
LSG1-206ENST00000466391 U2AF1Q01081 240 aaKnown RBP eCLIP10.55□□□□□ -0.72
LSG1-206ENST00000466391 XPCQ01831 940 aaPredicted RBP10.55□□□□□ -0.72
LSG1-206ENST00000466391 PRPF40BQ6NWY9 871 aaKnown RBP10.55□□□□□ -0.72
LSG1-206ENST00000466391 ABCB6Q9NP58 842 aa10.55□□□□□ -0.72
LSG1-206ENST00000466391 MAP2P11137 1827 aaKnown RBP10.55□□□□□ -0.72
LSG1-206ENST00000466391 PTCH1Q13635 1447 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms