RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 METTL16Q86W50 562 aaKnown RBP12□□□□□ -0.49
UFD1-206ENST00000466373 FANCBQ8NB91 859 aa12□□□□□ -0.49
UFD1-206ENST00000466373 JAG2Q9Y219 1238 aa12□□□□□ -0.49
UFD1-206ENST00000466373 ECM29Q5VYK3 1845 aa12□□□□□ -0.49
UFD1-206ENST00000466373 LRP5O75197 1615 aa12□□□□□ -0.49
UFD1-206ENST00000466373 PNPLA7Q6ZV29 1317 aa12□□□□□ -0.49
UFD1-206ENST00000466373 EVX2Q03828 476 aa12□□□□□ -0.49
UFD1-206ENST00000466373 ANKRD18AQ8IVF6 992 aa12□□□□□ -0.49
UFD1-206ENST00000466373 CDC5LQ99459 802 aaKnown RBP12□□□□□ -0.49
UFD1-206ENST00000466373 PCDHB6Q9Y5E3 794 aa12□□□□□ -0.49
UFD1-206ENST00000466373 GOLGB1Q14789 3259 aaKnown RBP12□□□□□ -0.49
UFD1-206ENST00000466373 TNKSO95271 1327 aa11.99□□□□□ -0.49
UFD1-206ENST00000466373 COL16A1Q07092 1604 aaPredicted RBP11.99□□□□□ -0.49
UFD1-206ENST00000466373 SLC4A8Q2Y0W8 1093 aa11.99□□□□□ -0.49
UFD1-206ENST00000466373 MTERF4Q7Z6M4 381 aaKnown RBP11.99□□□□□ -0.49
UFD1-206ENST00000466373 CRACR2BQ8N4Y2 399 aaPredicted RBP11.99□□□□□ -0.49
UFD1-206ENST00000466373 KRI1Q8N9T8 703 aaKnown RBP11.99□□□□□ -0.49
UFD1-206ENST00000466373 CABP5Q9NP86 173 aa11.99□□□□□ -0.49
UFD1-206ENST00000466373 PCDHA5Q9Y5H7 936 aa11.99□□□□□ -0.49
UFD1-206ENST00000466373 FAM205CA6NFA0 338 aa11.99□□□□□ -0.49
UFD1-206ENST00000466373 NEMFO60524 1076 aa11.99□□□□□ -0.49
UFD1-206ENST00000466373 KLRK1P26718 216 aa11.99□□□□□ -0.49
UFD1-206ENST00000466373 TPM4P67936 248 aa11.99□□□□□ -0.49
UFD1-206ENST00000466373 FANCCQ00597 558 aa11.99□□□□□ -0.49
UFD1-206ENST00000466373 PTPN14Q15678 1187 aa11.99□□□□□ -0.49
UFD1-206ENST00000466373 ARMCX5Q6P1M9 558 aa11.99□□□□□ -0.49
UFD1-206ENST00000466373 GRAMD1CQ8IYS0 662 aa11.99□□□□□ -0.49
UFD1-206ENST00000466373 CCDC112Q8NEF3 446 aa11.99□□□□□ -0.49
UFD1-206ENST00000466373 DPF2Q92785 391 aa11.99□□□□□ -0.49
UFD1-206ENST00000466373 CELF1Q92879 486 aaKnown RBP11.99□□□□□ -0.49
UFD1-206ENST00000466373 BPIFA3Q9BQP9 254 aa11.99□□□□□ -0.49
UFD1-206ENST00000466373 HSD3B7Q9H2F3 369 aa11.99□□□□□ -0.49
UFD1-206ENST00000466373 ROBO1Q9Y6N7 1651 aa11.98□□□□□ -0.49
UFD1-206ENST00000466373 POLR2DO15514 142 aaKnown RBP11.98□□□□□ -0.49
UFD1-206ENST00000466373 CUTAO60888 179 aa11.98□□□□□ -0.49
UFD1-206ENST00000466373 SERPINC1P01008 464 aa11.98□□□□□ -0.49
UFD1-206ENST00000466373 KRBA2Q6ZNG9 492 aa11.98□□□□□ -0.49
UFD1-206ENST00000466373 WASF1Q92558 559 aa11.98□□□□□ -0.49
UFD1-206ENST00000466373 TIGD1Q96MW7 591 aa11.98□□□□□ -0.49
UFD1-206ENST00000466373 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.98□□□□□ -0.49
UFD1-206ENST00000466373 VPS54Q9P1Q0 977 aa11.98□□□□□ -0.49
UFD1-206ENST00000466373 DOCK2Q92608 1830 aa11.98□□□□□ -0.49
UFD1-206ENST00000466373 ARAP2Q8WZ64 1704 aa11.98□□□□□ -0.49
UFD1-206ENST00000466373 MYH2Q9UKX2 1941 aa11.98□□□□□ -0.49
UFD1-206ENST00000466373 SMTNL1A8MU46 457 aa11.98□□□□□ -0.49
UFD1-206ENST00000466373 DEXIO95424 95 aa11.98□□□□□ -0.49
UFD1-206ENST00000466373 GOLGA8FQ08AF8 430 aa11.98□□□□□ -0.49
UFD1-206ENST00000466373 GOLGA8DPQ0D2H9 430 aa11.98□□□□□ -0.49
UFD1-206ENST00000466373 ZNF827Q17R98 1081 aa11.98□□□□□ -0.49
UFD1-206ENST00000466373 USP49Q70CQ1 688 aa11.98□□□□□ -0.49
UFD1-206ENST00000466373 CCAR2Q8N163 923 aaKnown RBP11.98□□□□□ -0.49
UFD1-206ENST00000466373 RNF41Q9H4P4 317 aaPredicted RBP11.98□□□□□ -0.49
UFD1-206ENST00000466373 TUBE1Q9UJT0 475 aa11.98□□□□□ -0.49
UFD1-206ENST00000466373 ZNF652Q9Y2D9 606 aa11.98□□□□□ -0.49
UFD1-206ENST00000466373 STK36Q9NRP7 1315 aa11.98□□□□□ -0.49
UFD1-206ENST00000466373 SFPQP23246 707 aaKnown RBP eCLIP11.97□□□□□ -0.49
UFD1-206ENST00000466373 GSDMDP57764 484 aa11.97□□□□□ -0.49
UFD1-206ENST00000466373 CFAP100Q494V2 611 aa11.97□□□□□ -0.49
UFD1-206ENST00000466373 PPP4R3BQ5MIZ7 849 aa11.97□□□□□ -0.49
UFD1-206ENST00000466373 PTF1AQ7RTS3 328 aa11.97□□□□□ -0.49
UFD1-206ENST00000466373 ESR2Q92731 530 aa11.97□□□□□ -0.49
UFD1-206ENST00000466373 GNL3LQ9NVN8 582 aaKnown RBP11.97□□□□□ -0.49
UFD1-206ENST00000466373 TFCP2L1Q9NZI6 479 aa11.97□□□□□ -0.49
UFD1-206ENST00000466373 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.97□□□□□ -0.49
UFD1-206ENST00000466373 V9GYY5 206 aaPredicted RBP11.97□□□□□ -0.49
UFD1-206ENST00000466373 BAZ2AQ9UIF9 1905 aaKnown RBP11.97□□□□□ -0.49
UFD1-206ENST00000466373 COL1A1P02452 1464 aaPredicted RBP11.97□□□□□ -0.49
UFD1-206ENST00000466373 CTIFO43310 598 aaKnown RBP11.97□□□□□ -0.49
UFD1-206ENST00000466373 BMP6P22004 513 aa11.97□□□□□ -0.49
UFD1-206ENST00000466373 PDE4BQ07343 736 aa11.97□□□□□ -0.49
UFD1-206ENST00000466373 PDCL2Q8N4E4 241 aa11.97□□□□□ -0.49
UFD1-206ENST00000466373 ENAHQ8N8S7 591 aaPredicted RBP11.97□□□□□ -0.49
UFD1-206ENST00000466373 LINC00116Q8NCU8 138 aa11.97□□□□□ -0.49
UFD1-206ENST00000466373 ZNF384Q8TF68 577 aa11.97□□□□□ -0.49
UFD1-206ENST00000466373 CDCA7Q9BWT1 371 aaPredicted RBP11.97□□□□□ -0.49
UFD1-206ENST00000466373 OSBPL5Q9H0X9 879 aaPredicted RBP11.97□□□□□ -0.49
UFD1-206ENST00000466373 FANCLQ9NW38 375 aa11.97□□□□□ -0.49
UFD1-206ENST00000466373 MINPP1Q9UNW1 487 aa11.97□□□□□ -0.49
UFD1-206ENST00000466373 CCDC196A0A1B0GTZ2 297 aa11.97□□□□□ -0.49
UFD1-206ENST00000466373 UBASH3AP57075 661 aa11.97□□□□□ -0.49
UFD1-206ENST00000466373 AKAP17AQ02040 695 aaKnown RBP11.97□□□□□ -0.49
UFD1-206ENST00000466373 MYL5Q02045 173 aa11.97□□□□□ -0.49
UFD1-206ENST00000466373 CAVIN4Q5BKX8 364 aa11.97□□□□□ -0.49
UFD1-206ENST00000466373 OLFM4Q6UX06 510 aa11.97□□□□□ -0.49
UFD1-206ENST00000466373 SHISA4Q96DD7 197 aa11.97□□□□□ -0.49
UFD1-206ENST00000466373 RIOK1Q9BRS2 568 aaKnown RBP11.97□□□□□ -0.49
UFD1-206ENST00000466373 PHLPP1O60346 1717 aa11.96□□□□□ -0.49
UFD1-206ENST00000466373 PLEKHA8P1O95397 391 aa11.96□□□□□ -0.49
UFD1-206ENST00000466373 PRR29P0C7W0 189 aa11.96□□□□□ -0.49
UFD1-206ENST00000466373 NCBP1Q09161 790 aaKnown RBP11.96□□□□□ -0.49
UFD1-206ENST00000466373 FAM98CQ17RN3 349 aaKnown RBP11.96□□□□□ -0.49
UFD1-206ENST00000466373 FAM84BQ96KN1 310 aaPredicted RBP11.96□□□□□ -0.49
UFD1-206ENST00000466373 SERTAD1Q9UHV2 236 aa11.96□□□□□ -0.49
UFD1-206ENST00000466373 FBXO2Q9UK22 296 aaPredicted RBP11.96□□□□□ -0.49
UFD1-206ENST00000466373 PAXBP1Q9Y5B6 917 aa11.96□□□□□ -0.49
UFD1-206ENST00000466373 SPDYE4A6NLX3 237 aa11.96□□□□□ -0.5
UFD1-206ENST00000466373 TMEM232C9JQI7 657 aa11.96□□□□□ -0.5
UFD1-206ENST00000466373 NMT2O60551 498 aa11.96□□□□□ -0.5
UFD1-206ENST00000466373 SEC23AQ15436 765 aa11.96□□□□□ -0.5
UFD1-206ENST00000466373 RILPL1Q5EBL4 403 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms