RNA–Protein interactions for RNA: ENST00000466272.1

SMTN-214, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-214ENST00000466272 RRP1BQ14684 758 aaKnown RBP13.18□□□□□ -0.3
SMTN-214ENST00000466272 LDLRAD1Q5T700 205 aa13.18□□□□□ -0.3
SMTN-214ENST00000466272 DCAF15Q66K64 600 aa13.18□□□□□ -0.3
SMTN-214ENST00000466272 RGMBQ6NW40 437 aa13.18□□□□□ -0.3
SMTN-214ENST00000466272 CWC27Q6UX04 472 aaKnown RBP13.18□□□□□ -0.3
SMTN-214ENST00000466272 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.18□□□□□ -0.3
SMTN-214ENST00000466272 CNKSR2Q8WXI2 1034 aa13.18□□□□□ -0.3
SMTN-214ENST00000466272 ZKSCAN4Q969J2 545 aaPredicted RBP13.18□□□□□ -0.3
SMTN-214ENST00000466272 CAPNS2Q96L46 248 aa13.18□□□□□ -0.3
SMTN-214ENST00000466272 ZIC5Q96T25 663 aa13.18□□□□□ -0.3
SMTN-214ENST00000466272 ELP3Q9H9T3 547 aa13.18□□□□□ -0.3
SMTN-214ENST00000466272 HELLSQ9NRZ9 838 aa13.18□□□□□ -0.3
SMTN-214ENST00000466272 MCM9Q9NXL9 1143 aa13.18□□□□□ -0.3
SMTN-214ENST00000466272 CCDC171Q6TFL3 1326 aa13.17□□□□□ -0.3
SMTN-214ENST00000466272 PHF20L1A8MW92 1017 aa13.17□□□□□ -0.3
SMTN-214ENST00000466272 FAM155AB1AL88 458 aaPredicted RBP13.17□□□□□ -0.3
SMTN-214ENST00000466272 POLR3DP05423 398 aaPredicted RBP13.17□□□□□ -0.3
SMTN-214ENST00000466272 HLA-DOAP06340 250 aa13.17□□□□□ -0.3
SMTN-214ENST00000466272 SLC10A3P09131 477 aa13.17□□□□□ -0.3
SMTN-214ENST00000466272 GJA5P36382 358 aa13.17□□□□□ -0.3
SMTN-214ENST00000466272 ZNF157P51786 506 aaPredicted RBP13.17□□□□□ -0.3
SMTN-214ENST00000466272 DEFB115Q30KQ5 88 aa13.17□□□□□ -0.3
SMTN-214ENST00000466272 CCDC84Q86UT8 332 aaPredicted RBP13.17□□□□□ -0.3
SMTN-214ENST00000466272 DNAJC5GQ8N7S2 189 aa13.17□□□□□ -0.3
SMTN-214ENST00000466272 SLC44A5Q8NCS7 719 aa13.17□□□□□ -0.3
SMTN-214ENST00000466272 DYNLL2Q96FJ2 89 aa13.17□□□□□ -0.3
SMTN-214ENST00000466272 DHX36Q9H2U1 1008 aaKnown RBP13.17□□□□□ -0.3
SMTN-214ENST00000466272 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.17□□□□□ -0.3
SMTN-214ENST00000466272 SNCAIPQ9Y6H5 919 aa13.17□□□□□ -0.3
SMTN-214ENST00000466272 PTPRFP10586 1907 aa13.17□□□□□ -0.3
SMTN-214ENST00000466272 GDF11O95390 407 aa13.16□□□□□ -0.3
SMTN-214ENST00000466272 CHMLP26374 656 aa13.16□□□□□ -0.3
SMTN-214ENST00000466272 MCMDC2Q4G0Z9 681 aa13.16□□□□□ -0.3
SMTN-214ENST00000466272 BMP2KLQ5H9B9 411 aa13.16□□□□□ -0.3
SMTN-214ENST00000466272 CTR9Q6PD62 1173 aa13.16□□□□□ -0.3
SMTN-214ENST00000466272 ANKRD13AQ8IZ07 590 aa13.16□□□□□ -0.3
SMTN-214ENST00000466272 CRACR2BQ8N4Y2 399 aaPredicted RBP13.16□□□□□ -0.3
SMTN-214ENST00000466272 HOOK2Q96ED9 719 aa13.16□□□□□ -0.3
SMTN-214ENST00000466272 HHIPL1Q96JK4 782 aa13.16□□□□□ -0.3
SMTN-214ENST00000466272 ATP8A2Q9NTI2 1148 aa13.16□□□□□ -0.3
SMTN-214ENST00000466272 PI4KBQ9UBF8 816 aa13.16□□□□□ -0.3
SMTN-214ENST00000466272 ZNF112Q9UJU3 913 aa13.16□□□□□ -0.3
SMTN-214ENST00000466272 WDR33Q9C0J8 1336 aaKnown RBP13.15□□□□□ -0.3
SMTN-214ENST00000466272 USP17L12C9JPN9 530 aa13.15□□□□□ -0.3
SMTN-214ENST00000466272 USP17L21D6R901 530 aa13.15□□□□□ -0.3
SMTN-214ENST00000466272 APPP05067 770 aa13.15□□□□□ -0.3
SMTN-214ENST00000466272 GNAT2P19087 354 aa13.15□□□□□ -0.3
SMTN-214ENST00000466272 TDO2P48775 406 aa13.15□□□□□ -0.3
SMTN-214ENST00000466272 JAG1P78504 1218 aa13.15□□□□□ -0.3
SMTN-214ENST00000466272 MAP3K9P80192 1104 aa13.15□□□□□ -0.3
SMTN-214ENST00000466272 MAP3K10Q02779 954 aa13.15□□□□□ -0.3
SMTN-214ENST00000466272 METTL16Q86W50 562 aaKnown RBP13.15□□□□□ -0.3
SMTN-214ENST00000466272 IFNL3Q8IZI9 196 aa13.15□□□□□ -0.3
SMTN-214ENST00000466272 STK11IPQ8N1F8 1099 aa13.15□□□□□ -0.3
SMTN-214ENST00000466272 WNK4Q96J92 1243 aa13.15□□□□□ -0.3
SMTN-214ENST00000466272 CSADQ9Y600 493 aa13.15□□□□□ -0.3
SMTN-214ENST00000466272 GREB1LQ9C091 1923 aaPredicted RBP13.15□□□□□ -0.3
SMTN-214ENST00000466272 PATL2C9JE40 543 aaKnown RBP13.14□□□□□ -0.31
SMTN-214ENST00000466272 HIP1O00291 1037 aa13.14□□□□□ -0.31
SMTN-214ENST00000466272 TBC1D12O60347 775 aa13.14□□□□□ -0.31
SMTN-214ENST00000466272 SHMT1P34896 483 aa13.14□□□□□ -0.31
SMTN-214ENST00000466272 GABPAQ06546 454 aa13.14□□□□□ -0.31
SMTN-214ENST00000466272 C12orf60Q5U649 245 aa13.14□□□□□ -0.31
SMTN-214ENST00000466272 OPTNQ96CV9 577 aa13.14□□□□□ -0.31
SMTN-214ENST00000466272 OTUD5Q96G74 571 aa13.14□□□□□ -0.31
SMTN-214ENST00000466272 EHD4Q9H223 541 aa13.14□□□□□ -0.31
SMTN-214ENST00000466272 ARPP21Q9UBL0 812 aaPredicted RBP13.14□□□□□ -0.31
SMTN-214ENST00000466272 HERC5Q9UII4 1024 aaKnown RBP13.14□□□□□ -0.31
SMTN-214ENST00000466272 SERPINB13Q9UIV8 391 aa13.14□□□□□ -0.31
SMTN-214ENST00000466272 ROBO3Q96MS0 1386 aa13.14□□□□□ -0.31
SMTN-214ENST00000466272 MINDY4BA8MYZ0 360 aa13.13□□□□□ -0.31
SMTN-214ENST00000466272 HSPD1P10809 573 aaKnown RBP13.13□□□□□ -0.31
SMTN-214ENST00000466272 NOL9Q5SY16 702 aaKnown RBP13.13□□□□□ -0.31
SMTN-214ENST00000466272 TTC6Q86TZ1 520 aa13.13□□□□□ -0.31
SMTN-214ENST00000466272 TICAM2Q86XR7 235 aa13.13□□□□□ -0.31
SMTN-214ENST00000466272 SCYL3Q8IZE3 742 aa13.13□□□□□ -0.31
SMTN-214ENST00000466272 DDRGK1Q96HY6 314 aa13.13□□□□□ -0.31
SMTN-214ENST00000466272 TRIM34Q9BYJ4 488 aa13.13□□□□□ -0.31
SMTN-214ENST00000466272 NAPBQ9H115 298 aa13.13□□□□□ -0.31
SMTN-214ENST00000466272 RAD50Q92878 1312 aa13.13□□□□□ -0.31
SMTN-214ENST00000466272 LOC285556D6RIA3 1793 aa13.12□□□□□ -0.31
SMTN-214ENST00000466272 SPDYE5A6NIY4 337 aa13.12□□□□□ -0.31
SMTN-214ENST00000466272 ECE1P42892 770 aa13.12□□□□□ -0.31
SMTN-214ENST00000466272 SPRYD7Q5W111 196 aa13.12□□□□□ -0.31
SMTN-214ENST00000466272 GIMAP6Q6P9H5 292 aa13.12□□□□□ -0.31
SMTN-214ENST00000466272 SLC10A4Q96EP9 437 aa13.12□□□□□ -0.31
SMTN-214ENST00000466272 TACC3Q9Y6A5 838 aa13.12□□□□□ -0.31
SMTN-214ENST00000466272 SGSM2O43147 1006 aa13.11□□□□□ -0.31
SMTN-214ENST00000466272 CDC45O75419 566 aa13.11□□□□□ -0.31
SMTN-214ENST00000466272 HAND2P61296 217 aa13.11□□□□□ -0.31
SMTN-214ENST00000466272 KIF23Q02241 960 aaPredicted RBP13.11□□□□□ -0.31
SMTN-214ENST00000466272 CTDSPL2Q05D32 466 aa13.11□□□□□ -0.31
SMTN-214ENST00000466272 SBK1Q52WX2 424 aa13.11□□□□□ -0.31
SMTN-214ENST00000466272 TATDN1Q6P1N9 297 aa13.11□□□□□ -0.31
SMTN-214ENST00000466272 C16orf86Q6ZW13 317 aa13.11□□□□□ -0.31
SMTN-214ENST00000466272 CLEC10AQ8IUN9 316 aa13.11□□□□□ -0.31
SMTN-214ENST00000466272 FOXP4Q8IVH2 680 aaPredicted RBP13.11□□□□□ -0.31
SMTN-214ENST00000466272 AMOTL1Q8IY63 956 aa13.11□□□□□ -0.31
SMTN-214ENST00000466272 NACAP1Q9BZK3 213 aa13.11□□□□□ -0.31
SMTN-214ENST00000466272 ZBTB21Q9ULJ3 1066 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms