RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 SH3RF3Q8TEJ3 882 aaPredicted RBP12.89□□□□□ -0.35
NPHP3-203ENST00000465756 LNPKQ9C0E8 428 aa12.89□□□□□ -0.35
NPHP3-203ENST00000465756 SLC4A4Q9Y6R1 1079 aa12.89□□□□□ -0.35
NPHP3-203ENST00000465756 MAST2Q6P0Q8 1798 aa12.89□□□□□ -0.35
NPHP3-203ENST00000465756 ATRNL1Q5VV63 1379 aa12.89□□□□□ -0.35
NPHP3-203ENST00000465756 MBD4O95243 580 aa12.88□□□□□ -0.35
NPHP3-203ENST00000465756 TAF1CQ15572 869 aaPredicted RBP12.88□□□□□ -0.35
NPHP3-203ENST00000465756 GRIK5Q16478 980 aa12.88□□□□□ -0.35
NPHP3-203ENST00000465756 ARHGEF10LQ9HCE6 1279 aa12.88□□□□□ -0.35
NPHP3-203ENST00000465756 C19orf81C9J6K1 198 aa12.88□□□□□ -0.35
NPHP3-203ENST00000465756 PDE4BQ07343 736 aa12.88□□□□□ -0.35
NPHP3-203ENST00000465756 PKN2Q16513 984 aaKnown RBP12.88□□□□□ -0.35
NPHP3-203ENST00000465756 CENPQQ7L2Z9 268 aaPredicted RBP12.88□□□□□ -0.35
NPHP3-203ENST00000465756 CTDP1Q9Y5B0 961 aaPredicted RBP12.88□□□□□ -0.35
NPHP3-203ENST00000465756 MYH2Q9UKX2 1941 aa12.88□□□□□ -0.35
NPHP3-203ENST00000465756 FKTNO75072 461 aa12.88□□□□□ -0.35
NPHP3-203ENST00000465756 MIGA2Q7L4E1 593 aa12.88□□□□□ -0.35
NPHP3-203ENST00000465756 NAPBQ9H115 298 aa12.88□□□□□ -0.35
NPHP3-203ENST00000465756 FAM198AQ9UFP1 575 aa12.88□□□□□ -0.35
NPHP3-203ENST00000465756 AOC2O75106 756 aa12.87□□□□□ -0.35
NPHP3-203ENST00000465756 TM4SF4P48230 202 aa12.87□□□□□ -0.35
NPHP3-203ENST00000465756 VGLL4Q14135 290 aa12.87□□□□□ -0.35
NPHP3-203ENST00000465756 NOM1Q5C9Z4 860 aaKnown RBP12.87□□□□□ -0.35
NPHP3-203ENST00000465756 RILPL2Q969X0 211 aa12.87□□□□□ -0.35
NPHP3-203ENST00000465756 HELLSQ9NRZ9 838 aa12.87□□□□□ -0.35
NPHP3-203ENST00000465756 STAP2Q9UGK3 403 aa12.87□□□□□ -0.35
NPHP3-203ENST00000465756 FLT1P17948 1338 aa12.87□□□□□ -0.35
NPHP3-203ENST00000465756 FMR1Q06787 632 aaKnown RBP eCLIP12.87□□□□□ -0.35
NPHP3-203ENST00000465756 MKNK2Q9HBH9 465 aa12.87□□□□□ -0.35
NPHP3-203ENST00000465756 CTNNA3Q9UI47 895 aa12.87□□□□□ -0.35
NPHP3-203ENST00000465756 RHBDL3P58872 404 aa12.87□□□□□ -0.35
NPHP3-203ENST00000465756 POLR2AP24928 1970 aaKnown RBP12.86□□□□□ -0.35
NPHP3-203ENST00000465756 TRPA1O75762 1119 aa12.86□□□□□ -0.35
NPHP3-203ENST00000465756 PDE1AP54750 535 aa12.86□□□□□ -0.35
NPHP3-203ENST00000465756 NFIAQ12857 509 aa12.86□□□□□ -0.35
NPHP3-203ENST00000465756 TNS4Q8IZW8 715 aa12.86□□□□□ -0.35
NPHP3-203ENST00000465756 ZNF444Q8N0Y2 327 aaPredicted RBP12.86□□□□□ -0.35
NPHP3-203ENST00000465756 TEPSINQ96N21 525 aa12.86□□□□□ -0.35
NPHP3-203ENST00000465756 ZNF112Q9UJU3 913 aa12.86□□□□□ -0.35
NPHP3-203ENST00000465756 MPHOSPH10O00566 681 aaKnown RBP12.86□□□□□ -0.35
NPHP3-203ENST00000465756 PRMT2P55345 433 aa12.86□□□□□ -0.35
NPHP3-203ENST00000465756 IRX3P78415 501 aaPredicted RBP12.86□□□□□ -0.35
NPHP3-203ENST00000465756 CERKLQ49MI3 558 aaPredicted RBP12.86□□□□□ -0.35
NPHP3-203ENST00000465756 CCDC178Q5BJE1 867 aa12.86□□□□□ -0.35
NPHP3-203ENST00000465756 GADL1Q6ZQY3 521 aa12.86□□□□□ -0.35
NPHP3-203ENST00000465756 KIAA1211Q6ZU35 1233 aa12.86□□□□□ -0.35
NPHP3-203ENST00000465756 MKRN3Q13064 507 aaKnown RBP12.86□□□□□ -0.35
NPHP3-203ENST00000465756 RNF41Q9H4P4 317 aaPredicted RBP12.86□□□□□ -0.35
NPHP3-203ENST00000465756 SAP30BPQ9UHR5 308 aaKnown RBP12.86□□□□□ -0.35
NPHP3-203ENST00000465756 NUCB1Q02818 461 aa12.85□□□□□ -0.35
NPHP3-203ENST00000465756 ANKRD23Q86SG2 305 aa12.85□□□□□ -0.35
NPHP3-203ENST00000465756 SMCR8Q8TEV9 937 aaPredicted RBP12.85□□□□□ -0.35
NPHP3-203ENST00000465756 PCDHAC2Q9Y5I4 1007 aa12.85□□□□□ -0.35
NPHP3-203ENST00000465756 ZHX2Q9Y6X8 837 aa12.85□□□□□ -0.35
NPHP3-203ENST00000465756 ABCB5Q2M3G0 1257 aa12.85□□□□□ -0.35
NPHP3-203ENST00000465756 USP17L2Q6R6M4 530 aa12.85□□□□□ -0.35
NPHP3-203ENST00000465756 MOB2Q70IA6 237 aa12.85□□□□□ -0.35
NPHP3-203ENST00000465756 SLC45A1Q9Y2W3 748 aa12.85□□□□□ -0.35
NPHP3-203ENST00000465756 ARMT1Q9H993 441 aa12.84□□□□□ -0.35
NPHP3-203ENST00000465756 GNRH1P01148 92 aa12.84□□□□□ -0.35
NPHP3-203ENST00000465756 DYNLL1P63167 89 aaKnown RBP12.84□□□□□ -0.35
NPHP3-203ENST00000465756 IFNL1Q8IU54 200 aa12.84□□□□□ -0.35
NPHP3-203ENST00000465756 PROCA1Q8NCQ7 364 aaPredicted RBP12.84□□□□□ -0.35
NPHP3-203ENST00000465756 ZNF280CQ8ND82 737 aa12.84□□□□□ -0.35
NPHP3-203ENST00000465756 ANTXR1Q9H6X2 564 aa12.84□□□□□ -0.35
NPHP3-203ENST00000465756 RNF186Q9NXI6 227 aa12.84□□□□□ -0.35
NPHP3-203ENST00000465756 SCAF8Q9UPN6 1271 aaKnown RBP12.84□□□□□ -0.35
NPHP3-203ENST00000465756 HSPA8P11142 646 aaKnown RBP12.84□□□□□ -0.35
NPHP3-203ENST00000465756 CAP2P40123 477 aa12.84□□□□□ -0.35
NPHP3-203ENST00000465756 GCLCP48506 637 aaPredicted RBP12.84□□□□□ -0.35
NPHP3-203ENST00000465756 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.84□□□□□ -0.35
NPHP3-203ENST00000465756 CTU1Q7Z7A3 348 aaKnown RBP12.84□□□□□ -0.35
NPHP3-203ENST00000465756 PCP11498 1178 aaKnown RBP12.83□□□□□ -0.36
NPHP3-203ENST00000465756 CCNA1P78396 465 aa12.83□□□□□ -0.36
NPHP3-203ENST00000465756 TMEM179Q6ZVK1 233 aa12.83□□□□□ -0.36
NPHP3-203ENST00000465756 LBX1P52954 281 aa12.83□□□□□ -0.36
NPHP3-203ENST00000465756 SNCAIPQ9Y6H5 919 aa12.83□□□□□ -0.36
NPHP3-203ENST00000465756 RAD50Q92878 1312 aa12.82□□□□□ -0.36
NPHP3-203ENST00000465756 PATL2C9JE40 543 aaKnown RBP12.82□□□□□ -0.36
NPHP3-203ENST00000465756 FOXN1O15353 648 aa12.82□□□□□ -0.36
NPHP3-203ENST00000465756 INPP5BP32019 993 aa12.82□□□□□ -0.36
NPHP3-203ENST00000465756 MCMDC2Q4G0Z9 681 aa12.82□□□□□ -0.36
NPHP3-203ENST00000465756 WDR18Q9BV38 432 aa12.82□□□□□ -0.36
NPHP3-203ENST00000465756 TOMM22Q9NS69 142 aa12.82□□□□□ -0.36
NPHP3-203ENST00000465756 KCNH4Q9UQ05 1017 aa12.82□□□□□ -0.36
NPHP3-203ENST00000465756 USP17L10C9JJH3 530 aa12.82□□□□□ -0.36
NPHP3-203ENST00000465756 GPAA1O43292 621 aa12.82□□□□□ -0.36
NPHP3-203ENST00000465756 CLMNQ96JQ2 1002 aa12.82□□□□□ -0.36
NPHP3-203ENST00000465756 CFHR5Q9BXR6 569 aa12.82□□□□□ -0.36
NPHP3-203ENST00000465756 MINDY4BA8MYZ0 360 aa12.82□□□□□ -0.36
NPHP3-203ENST00000465756 FAM155AB1AL88 458 aaPredicted RBP12.82□□□□□ -0.36
NPHP3-203ENST00000465756 MAP3K10Q02779 954 aa12.82□□□□□ -0.36
NPHP3-203ENST00000465756 SBK1Q52WX2 424 aa12.82□□□□□ -0.36
NPHP3-203ENST00000465756 OSBPL3Q9H4L5 887 aa12.82□□□□□ -0.36
NPHP3-203ENST00000465756 PALD1Q9ULE6 856 aa12.82□□□□□ -0.36
NPHP3-203ENST00000465756 DDTLA6NHG4 134 aaPredicted RBP12.81□□□□□ -0.36
NPHP3-203ENST00000465756 ZKSCAN4Q969J2 545 aaPredicted RBP12.81□□□□□ -0.36
NPHP3-203ENST00000465756 GOPCQ9HD26 462 aa12.81□□□□□ -0.36
NPHP3-203ENST00000465756 TESPA1A2RU30 521 aaPredicted RBP12.81□□□□□ -0.36
NPHP3-203ENST00000465756 IRX6P78412 446 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms