RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 CHD4Q14839 1912 aa21.08■□□□□ 0.96
SYNE4-204ENST00000465425 DOT1LQ8TEK3 1739 aa21.08■□□□□ 0.96
SYNE4-204ENST00000465425 LOC102724428A0A0B4J2F2 783 aa21.07■□□□□ 0.96
SYNE4-204ENST00000465425 KIF2AO00139 706 aaPredicted RBP21.07■□□□□ 0.96
SYNE4-204ENST00000465425 NTSR2O95665 410 aa21.07■□□□□ 0.96
SYNE4-204ENST00000465425 CYP7A1P22680 504 aa21.07■□□□□ 0.96
SYNE4-204ENST00000465425 SIK1P57059 783 aa21.07■□□□□ 0.96
SYNE4-204ENST00000465425 FOXP1Q9H334 677 aaPredicted RBP21.07■□□□□ 0.96
SYNE4-204ENST00000465425 RTL9Q8NET4 1388 aa21.07■□□□□ 0.96
SYNE4-204ENST00000465425 CBFA2T2O43439 604 aa21.07■□□□□ 0.96
SYNE4-204ENST00000465425 PPARAQ07869 468 aa21.07■□□□□ 0.96
SYNE4-204ENST00000465425 ARMCX5Q6P1M9 558 aa21.07■□□□□ 0.96
SYNE4-204ENST00000465425 METTL16Q86W50 562 aaKnown RBP21.07■□□□□ 0.96
SYNE4-204ENST00000465425 KIF18AQ8NI77 898 aa21.07■□□□□ 0.96
SYNE4-204ENST00000465425 CDC5LQ99459 802 aaKnown RBP21.07■□□□□ 0.96
SYNE4-204ENST00000465425 IQSEC3Q9UPP2 1182 aaPredicted RBP21.07■□□□□ 0.96
SYNE4-204ENST00000465425 ECM29Q5VYK3 1845 aa21.07■□□□□ 0.96
SYNE4-204ENST00000465425 ATP1A3P13637 1013 aa21.06■□□□□ 0.96
SYNE4-204ENST00000465425 RCAN1P53805 252 aa21.06■□□□□ 0.96
SYNE4-204ENST00000465425 UBASH3AP57075 661 aa21.06■□□□□ 0.96
SYNE4-204ENST00000465425 CRACR2BQ8N4Y2 399 aaPredicted RBP21.06■□□□□ 0.96
SYNE4-204ENST00000465425 MINDY4BA8MYZ0 360 aa21.06■□□□□ 0.96
SYNE4-204ENST00000465425 ZNF654Q8IZM8 581 aa21.06■□□□□ 0.96
SYNE4-204ENST00000465425 CMTR1Q8N1G2 835 aaKnown RBP21.06■□□□□ 0.96
SYNE4-204ENST00000465425 FANCBQ8NB91 859 aa21.06■□□□□ 0.96
SYNE4-204ENST00000465425 GNL3LQ9NVN8 582 aaKnown RBP21.06■□□□□ 0.96
SYNE4-204ENST00000465425 RAI14Q9P0K7 980 aa21.06■□□□□ 0.96
SYNE4-204ENST00000465425 CFAP100Q494V2 611 aa21.05■□□□□ 0.96
SYNE4-204ENST00000465425 SPECC1Q5M775 1068 aa21.05■□□□□ 0.96
SYNE4-204ENST00000465425 SDR42E1Q8WUS8 393 aa21.05■□□□□ 0.96
SYNE4-204ENST00000465425 ESR2Q92731 530 aa21.05■□□□□ 0.96
SYNE4-204ENST00000465425 PCDHA5Q9Y5H7 936 aa21.05■□□□□ 0.96
SYNE4-204ENST00000465425 ZNF652Q9Y2D9 606 aa21.05■□□□□ 0.96
SYNE4-204ENST00000465425 MAGEB6P1A0A0J9YX57 407 aa21.04■□□□□ 0.96
SYNE4-204ENST00000465425 TOB1P50616 345 aaPredicted RBP21.04■□□□□ 0.96
SYNE4-204ENST00000465425 AKAP17AQ02040 695 aaKnown RBP21.04■□□□□ 0.96
SYNE4-204ENST00000465425 ZMYND15Q9H091 742 aa21.04■□□□□ 0.96
SYNE4-204ENST00000465425 HSD3B7Q9H2F3 369 aa21.04■□□□□ 0.96
SYNE4-204ENST00000465425 CEP131Q9UPN4 1083 aa21.04■□□□□ 0.96
SYNE4-204ENST00000465425 E4F1Q66K89 784 aaPredicted RBP21.04■□□□□ 0.96
SYNE4-204ENST00000465425 PSDA5PKW4 1024 aaPredicted RBP21.03■□□□□ 0.96
SYNE4-204ENST00000465425 MYO1BO43795 1136 aa21.03■□□□□ 0.96
SYNE4-204ENST00000465425 XBP1P17861 261 aa21.03■□□□□ 0.96
SYNE4-204ENST00000465425 KCNJ6P48051 423 aa21.03■□□□□ 0.96
SYNE4-204ENST00000465425 NR5A1Q13285 461 aa21.03■□□□□ 0.96
SYNE4-204ENST00000465425 ITPK1Q13572 414 aa21.03■□□□□ 0.96
SYNE4-204ENST00000465425 ELOA2Q8IYF1 753 aaPredicted RBP21.03■□□□□ 0.96
SYNE4-204ENST00000465425 TNKSO95271 1327 aa21.03■□□□□ 0.96
SYNE4-204ENST00000465425 PTPREP23469 700 aa21.03■□□□□ 0.96
SYNE4-204ENST00000465425 FOXP4Q8IVH2 680 aaPredicted RBP21.03■□□□□ 0.96
SYNE4-204ENST00000465425 POSTNQ15063 836 aa21.02■□□□□ 0.96
SYNE4-204ENST00000465425 PPP2R5BQ15173 497 aa21.02■□□□□ 0.96
SYNE4-204ENST00000465425 ADGRA1Q86SQ6 560 aa21.02■□□□□ 0.96
SYNE4-204ENST00000465425 ANKRD18AQ8IVF6 992 aa21.02■□□□□ 0.96
SYNE4-204ENST00000465425 FBXO2Q9UK22 296 aaPredicted RBP21.02■□□□□ 0.96
SYNE4-204ENST00000465425 POLR2DO15514 142 aaKnown RBP21.01■□□□□ 0.95
SYNE4-204ENST00000465425 ATP2B1P20020 1258 aa21.01■□□□□ 0.95
SYNE4-204ENST00000465425 GYG1P46976 350 aa21.01■□□□□ 0.95
SYNE4-204ENST00000465425 CBX1P83916 185 aa21.01■□□□□ 0.95
SYNE4-204ENST00000465425 PPP1R13BQ96KQ4 1090 aa21.01■□□□□ 0.95
SYNE4-204ENST00000465425 CGNQ9P2M7 1197 aaKnown RBP21.01■□□□□ 0.95
SYNE4-204ENST00000465425 THRAP3Q9Y2W1 955 aaKnown RBP21.01■□□□□ 0.95
SYNE4-204ENST00000465425 PCDHB6Q9Y5E3 794 aa21.01■□□□□ 0.95
SYNE4-204ENST00000465425 CAVIN4Q5BKX8 364 aa21.01■□□□□ 0.95
SYNE4-204ENST00000465425 RNF26Q9BY78 433 aaPredicted RBP21.01■□□□□ 0.95
SYNE4-204ENST00000465425 FANCLQ9NW38 375 aa21.01■□□□□ 0.95
SYNE4-204ENST00000465425 ANAPC4Q9UJX5 808 aa21.01■□□□□ 0.95
SYNE4-204ENST00000465425 BCORQ6W2J9 1755 aa21■□□□□ 0.95
SYNE4-204ENST00000465425 FOXN1O15353 648 aa21■□□□□ 0.95
SYNE4-204ENST00000465425 SMAP1Q8IYB5 467 aaPredicted RBP21■□□□□ 0.95
SYNE4-204ENST00000465425 CABP5Q9NP86 173 aa21■□□□□ 0.95
SYNE4-204ENST00000465425 DACH1Q9UI36 760 aa21■□□□□ 0.95
SYNE4-204ENST00000465425 ZNF804BA4D1E1 1349 aa21■□□□□ 0.95
SYNE4-204ENST00000465425 PHLPP1O60346 1717 aa21■□□□□ 0.95
SYNE4-204ENST00000465425 CCP110O43303 1012 aa21■□□□□ 0.95
SYNE4-204ENST00000465425 TOP1P11387 765 aaKnown RBP21■□□□□ 0.95
SYNE4-204ENST00000465425 MDM2Q00987 491 aaPredicted RBP21■□□□□ 0.95
SYNE4-204ENST00000465425 GRIN1Q05586 938 aa21■□□□□ 0.95
SYNE4-204ENST00000465425 NAA30Q147X3 362 aaPredicted RBP21■□□□□ 0.95
SYNE4-204ENST00000465425 ZNF579Q8NAF0 562 aaKnown RBP21■□□□□ 0.95
SYNE4-204ENST00000465425 DPF2Q92785 391 aa21■□□□□ 0.95
SYNE4-204ENST00000465425 NOL10Q9BSC4 688 aaKnown RBP21■□□□□ 0.95
SYNE4-204ENST00000465425 BCL11BQ9C0K0 894 aaPredicted RBP21■□□□□ 0.95
SYNE4-204ENST00000465425 ZNF215Q9UL58 517 aaPredicted RBP21■□□□□ 0.95
SYNE4-204ENST00000465425 COL16A1Q07092 1604 aaPredicted RBP21■□□□□ 0.95
SYNE4-204ENST00000465425 SPATA31A1Q5TZJ5 1347 aa21■□□□□ 0.95
SYNE4-204ENST00000465425 WNK3Q9BYP7 1800 aa21■□□□□ 0.95
SYNE4-204ENST00000465425 SMARCE1Q969G3 411 aa20.99■□□□□ 0.95
SYNE4-204ENST00000465425 SRPRBQ9Y5M8 271 aaKnown RBP20.99■□□□□ 0.95
SYNE4-204ENST00000465425 ADAMTS2O95450 1211 aa20.99■□□□□ 0.95
SYNE4-204ENST00000465425 UBE4AQ14139 1066 aa20.99■□□□□ 0.95
SYNE4-204ENST00000465425 SEC23AQ15436 765 aa20.99■□□□□ 0.95
SYNE4-204ENST00000465425 KANK3Q6NY19 840 aa20.99■□□□□ 0.95
SYNE4-204ENST00000465425 OXER1Q8TDS5 423 aa20.99■□□□□ 0.95
SYNE4-204ENST00000465425 SERTAD1Q9UHV2 236 aa20.99■□□□□ 0.95
SYNE4-204ENST00000465425 BCL9LQ86UU0 1499 aa20.99■□□□□ 0.95
SYNE4-204ENST00000465425 IFIT1BQ5T764 474 aaKnown RBP20.98■□□□□ 0.95
SYNE4-204ENST00000465425 CATIPQ7Z7H3 387 aa20.98■□□□□ 0.95
SYNE4-204ENST00000465425 IQCA1Q86XH1 822 aa20.98■□□□□ 0.95
SYNE4-204ENST00000465425 PDILTQ8N807 584 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms