RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 ROBO3Q96MS0 1386 aa15.88■□□□□ 0.13
ATF3-208ENST00000465155 POTECB2RU33 542 aa15.87■□□□□ 0.13
ATF3-208ENST00000465155 HLA-DOAP06340 250 aa15.87■□□□□ 0.13
ATF3-208ENST00000465155 PSMA5P28066 241 aa15.87■□□□□ 0.13
ATF3-208ENST00000465155 TNNI2P48788 182 aa15.87■□□□□ 0.13
ATF3-208ENST00000465155 SH3BP5LQ7L8J4 393 aa15.87■□□□□ 0.13
ATF3-208ENST00000465155 FAM83AQ86UY5 434 aa15.87■□□□□ 0.13
ATF3-208ENST00000465155 DYNLL2Q96FJ2 89 aa15.87■□□□□ 0.13
ATF3-208ENST00000465155 NEK1Q96PY6 1258 aa15.87■□□□□ 0.13
ATF3-208ENST00000465155 RNF41Q9H4P4 317 aaPredicted RBP15.87■□□□□ 0.13
ATF3-208ENST00000465155 GGA3Q9NZ52 723 aa15.87■□□□□ 0.13
ATF3-208ENST00000465155 TACC3Q9Y6A5 838 aa15.87■□□□□ 0.13
ATF3-208ENST00000465155 MYH8P13535 1937 aa15.87■□□□□ 0.13
ATF3-208ENST00000465155 COL2A1P02458 1487 aaPredicted RBP15.87■□□□□ 0.13
ATF3-208ENST00000465155 NEDD4P46934 1319 aa15.87■□□□□ 0.13
ATF3-208ENST00000465155 POLR2AP24928 1970 aaKnown RBP15.87■□□□□ 0.13
ATF3-208ENST00000465155 ATRNL1Q5VV63 1379 aa15.87■□□□□ 0.13
ATF3-208ENST00000465155 CPA1P15085 419 aa15.86■□□□□ 0.13
ATF3-208ENST00000465155 TRDNQ13061 729 aa15.86■□□□□ 0.13
ATF3-208ENST00000465155 RABEP1Q15276 862 aa15.86■□□□□ 0.13
ATF3-208ENST00000465155 USP50Q70EL3 339 aaPredicted RBP15.86■□□□□ 0.13
ATF3-208ENST00000465155 NCOA7Q8NI08 942 aa15.86■□□□□ 0.13
ATF3-208ENST00000465155 UPF3BQ9BZI7 483 aaKnown RBP15.86■□□□□ 0.13
ATF3-208ENST00000465155 TM6SF1Q9BZW5 370 aa15.86■□□□□ 0.13
ATF3-208ENST00000465155 TMEM39BQ9GZU3 492 aa15.86■□□□□ 0.13
ATF3-208ENST00000465155 TAF1DQ9H5J8 278 aaPredicted RBP15.86■□□□□ 0.13
ATF3-208ENST00000465155 TOMM22Q9NS69 142 aa15.86■□□□□ 0.13
ATF3-208ENST00000465155 PDE4BQ07343 736 aa15.86■□□□□ 0.13
ATF3-208ENST00000465155 COL9A3Q14050 684 aaPredicted RBP15.86■□□□□ 0.13
ATF3-208ENST00000465155 RASA3Q14644 834 aa15.86■□□□□ 0.13
ATF3-208ENST00000465155 RRP12Q5JTH9 1297 aaKnown RBP15.86■□□□□ 0.13
ATF3-208ENST00000465155 BLOC1S2Q6QNY1 142 aa15.86■□□□□ 0.13
ATF3-208ENST00000465155 RALYLQ86SE5 291 aaKnown RBP15.86■□□□□ 0.13
ATF3-208ENST00000465155 APOBEC3FQ8IUX4 373 aaKnown RBP15.86■□□□□ 0.13
ATF3-208ENST00000465155 CSRNP1Q96S65 589 aa15.86■□□□□ 0.13
ATF3-208ENST00000465155 CNNM2Q9H8M5 875 aa15.86■□□□□ 0.13
ATF3-208ENST00000465155 ZSWIM6Q9HCJ5 1215 aa15.86■□□□□ 0.13
ATF3-208ENST00000465155 B4E1Z4 1266 aa15.85■□□□□ 0.13
ATF3-208ENST00000465155 PRDM1O75626 825 aa15.85■□□□□ 0.13
ATF3-208ENST00000465155 PCP11498 1178 aaKnown RBP15.85■□□□□ 0.13
ATF3-208ENST00000465155 NEK4P51957 841 aa15.85■□□□□ 0.13
ATF3-208ENST00000465155 EAPPQ56P03 285 aaPredicted RBP15.85■□□□□ 0.13
ATF3-208ENST00000465155 C16orf86Q6ZW13 317 aa15.85■□□□□ 0.13
ATF3-208ENST00000465155 RUFY3Q7L099 469 aa15.85■□□□□ 0.13
ATF3-208ENST00000465155 SLC44A5Q8NCS7 719 aa15.85■□□□□ 0.13
ATF3-208ENST00000465155 PI4KBQ9UBF8 816 aa15.85■□□□□ 0.13
ATF3-208ENST00000465155 SERPINB13Q9UIV8 391 aa15.85■□□□□ 0.13
ATF3-208ENST00000465155 CYP46A1Q9Y6A2 500 aa15.85■□□□□ 0.13
ATF3-208ENST00000465155 HMGB1P09429 215 aaKnown RBP15.84■□□□□ 0.13
ATF3-208ENST00000465155 ZNF526Q8TF50 670 aaPredicted RBP15.84■□□□□ 0.13
ATF3-208ENST00000465155 KRT23Q9C075 422 aa15.84■□□□□ 0.13
ATF3-208ENST00000465155 DEFB129Q9H1M3 183 aa15.84■□□□□ 0.13
ATF3-208ENST00000465155 EHD4Q9H223 541 aa15.84■□□□□ 0.13
ATF3-208ENST00000465155 RRAGCQ9HB90 399 aa15.84■□□□□ 0.13
ATF3-208ENST00000465155 MKNK2Q9HBH9 465 aa15.84■□□□□ 0.13
ATF3-208ENST00000465155 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.84■□□□□ 0.13
ATF3-208ENST00000465155 PITPNM2Q9BZ72 1349 aa15.84■□□□□ 0.13
ATF3-208ENST00000465155 FGRP09769 529 aa15.83■□□□□ 0.13
ATF3-208ENST00000465155 RPS6KB1P23443 525 aa15.83■□□□□ 0.13
ATF3-208ENST00000465155 CDK8P49336 464 aa15.83■□□□□ 0.13
ATF3-208ENST00000465155 GABPAQ06546 454 aa15.83■□□□□ 0.13
ATF3-208ENST00000465155 PNMA8AQ86V59 439 aaPredicted RBP15.83■□□□□ 0.13
ATF3-208ENST00000465155 CDAN1Q8IWY9 1227 aa15.83■□□□□ 0.13
ATF3-208ENST00000465155 MB21D2Q8IYB1 491 aaPredicted RBP15.83■□□□□ 0.13
ATF3-208ENST00000465155 CRACR2BQ8N4Y2 399 aaPredicted RBP15.83■□□□□ 0.13
ATF3-208ENST00000465155 NKX2-3Q8TAU0 364 aa15.83■□□□□ 0.13
ATF3-208ENST00000465155 DCPSQ96C86 337 aaKnown RBP15.83■□□□□ 0.13
ATF3-208ENST00000465155 ZNF287Q9HBT7 754 aa15.83■□□□□ 0.13
ATF3-208ENST00000465155 ORC4O43929 436 aa15.83■□□□□ 0.12
ATF3-208ENST00000465155 RANBP6O60518 1105 aaKnown RBP15.83■□□□□ 0.12
ATF3-208ENST00000465155 KDM4AO75164 1064 aa15.83■□□□□ 0.12
ATF3-208ENST00000465155 SLURP2P0DP57 97 aa15.83■□□□□ 0.12
ATF3-208ENST00000465155 VEGFAP15692 232 aaPredicted RBP15.83■□□□□ 0.12
ATF3-208ENST00000465155 DHX32Q7L7V1 743 aaKnown RBP15.83■□□□□ 0.12
ATF3-208ENST00000465155 CHST3Q7LGC8 479 aa15.83■□□□□ 0.12
ATF3-208ENST00000465155 FOXP4Q8IVH2 680 aaPredicted RBP15.83■□□□□ 0.12
ATF3-208ENST00000465155 TCEANC2Q96MN5 208 aa15.83■□□□□ 0.12
ATF3-208ENST00000465155 TRIM34Q9BYJ4 488 aa15.83■□□□□ 0.12
ATF3-208ENST00000465155 PGAP2Q9UHJ9 254 aa15.83■□□□□ 0.12
ATF3-208ENST00000465155 FAM196BA6NMK8 535 aa15.82■□□□□ 0.12
ATF3-208ENST00000465155 MCM5P33992 734 aa15.82■□□□□ 0.12
ATF3-208ENST00000465155 CYB5R4Q7L1T6 521 aa15.82■□□□□ 0.12
ATF3-208ENST00000465155 ZC3H15Q8WU90 426 aaKnown RBP15.82■□□□□ 0.12
ATF3-208ENST00000465155 ESR2Q92731 530 aa15.82■□□□□ 0.12
ATF3-208ENST00000465155 TEPSINQ96N21 525 aa15.82■□□□□ 0.12
ATF3-208ENST00000465155 DNAJC18Q9H819 358 aa15.82■□□□□ 0.12
ATF3-208ENST00000465155 PDRG1Q9NUG6 133 aa15.82■□□□□ 0.12
ATF3-208ENST00000465155 ZSWIM5Q9P217 1185 aa15.82■□□□□ 0.12
ATF3-208ENST00000465155 SWAP70Q9UH65 585 aa15.82■□□□□ 0.12
ATF3-208ENST00000465155 ST18O60284 1047 aa15.81■□□□□ 0.12
ATF3-208ENST00000465155 RASA1P20936 1047 aa15.81■□□□□ 0.12
ATF3-208ENST00000465155 ANP32AP39687 249 aaKnown RBP15.81■□□□□ 0.12
ATF3-208ENST00000465155 SULF1Q8IWU6 871 aa15.81■□□□□ 0.12
ATF3-208ENST00000465155 ZNF444Q8N0Y2 327 aaPredicted RBP15.81■□□□□ 0.12
ATF3-208ENST00000465155 TSPY2A6NKD2 308 aa15.8■□□□□ 0.12
ATF3-208ENST00000465155 PRC1O43663 620 aa15.8■□□□□ 0.12
ATF3-208ENST00000465155 ANTXR2P58335 489 aa15.8■□□□□ 0.12
ATF3-208ENST00000465155 EXOSC10Q01780 885 aaKnown RBP15.8■□□□□ 0.12
ATF3-208ENST00000465155 FAM47AQ5JRC9 791 aa15.8■□□□□ 0.12
ATF3-208ENST00000465155 PRAMEF18Q5VWM3 479 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms