RNA–Protein interactions for RNA: ENST00000465143.1

ITSN1-223, Transcript of intersectin 1, human

TSL 3

Gene ITSN1, Length 614 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-223	ENST00000465143	SLC10A4	Q96EP9	437 aa		9.28	□□□□□ -0.92
ITSN1-223	ENST00000465143	ZNF512B	Q96KM6	892 aa	Predicted RBP	9.28	□□□□□ -0.92
ITSN1-223	ENST00000465143	FAM155A	B1AL88	458 aa	Predicted RBP	9.27	□□□□□ -0.93
ITSN1-223	ENST00000465143	FOXN1	O15353	648 aa		9.27	□□□□□ -0.93
ITSN1-223	ENST00000465143	CA12	O43570	354 aa		9.27	□□□□□ -0.93
ITSN1-223	ENST00000465143	IDH1	O75874	414 aa	Known RBP	9.27	□□□□□ -0.93
ITSN1-223	ENST00000465143	BAG3	O95817	575 aa		9.27	□□□□□ -0.93
ITSN1-223	ENST00000465143	ZAP70	P43403	619 aa		9.27	□□□□□ -0.93
ITSN1-223	ENST00000465143	NFIA	Q12857	509 aa		9.27	□□□□□ -0.93
ITSN1-223	ENST00000465143	PICALM	Q13492	652 aa		9.27	□□□□□ -0.93
ITSN1-223	ENST00000465143	BMP2KL	Q5H9B9	411 aa		9.27	□□□□□ -0.93
ITSN1-223	ENST00000465143	DCAF15	Q66K64	600 aa		9.27	□□□□□ -0.93
ITSN1-223	ENST00000465143	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	9.27	□□□□□ -0.93
ITSN1-223	ENST00000465143	FAM151A	Q8WW52	585 aa		9.27	□□□□□ -0.93
ITSN1-223	ENST00000465143	NSUN4	Q96CB9	384 aa	Known RBP	9.27	□□□□□ -0.93
ITSN1-223	ENST00000465143	GPATCH3	Q96I76	525 aa		9.27	□□□□□ -0.93
ITSN1-223	ENST00000465143	TEPSIN	Q96N21	525 aa		9.27	□□□□□ -0.93
ITSN1-223	ENST00000465143	ZIC5	Q96T25	663 aa		9.27	□□□□□ -0.93
ITSN1-223	ENST00000465143	MROH7-TTC4	A0A0A0MT08	1334 aa		9.27	□□□□□ -0.93
ITSN1-223	ENST00000465143	GAK	O14976	1311 aa		9.27	□□□□□ -0.93
ITSN1-223	ENST00000465143	TTC41P	Q6P2S7	1318 aa		9.27	□□□□□ -0.93
ITSN1-223	ENST00000465143	GPR75-ASB3	A0A0A6YYF3	556 aa		9.26	□□□□□ -0.93
ITSN1-223	ENST00000465143	UNCX	A6NJT0	531 aa		9.26	□□□□□ -0.93
ITSN1-223	ENST00000465143	USP2	O75604	605 aa	Predicted RBP	9.26	□□□□□ -0.93
ITSN1-223	ENST00000465143	CYP2E1	P05181	493 aa	Predicted RBP	9.26	□□□□□ -0.93
ITSN1-223	ENST00000465143	LBX1	P52954	281 aa		9.26	□□□□□ -0.93
ITSN1-223	ENST00000465143	MAP3K9	P80192	1104 aa		9.26	□□□□□ -0.93
ITSN1-223	ENST00000465143	MAP3K12	Q12852	859 aa		9.26	□□□□□ -0.93
ITSN1-223	ENST00000465143	MAP3K11	Q16584	847 aa		9.26	□□□□□ -0.93
ITSN1-223	ENST00000465143	C8orf34	Q49A92	452 aa		9.26	□□□□□ -0.93
ITSN1-223	ENST00000465143	LDLRAD1	Q5T700	205 aa		9.26	□□□□□ -0.93
ITSN1-223	ENST00000465143	MIGA2	Q7L4E1	593 aa		9.26	□□□□□ -0.93
ITSN1-223	ENST00000465143	ANKRD13A	Q8IZ07	590 aa		9.26	□□□□□ -0.93
ITSN1-223	ENST00000465143	PI4K2B	Q8TCG2	481 aa		9.26	□□□□□ -0.93
ITSN1-223	ENST00000465143	DNAJC2	Q99543	621 aa	Known RBP	9.26	□□□□□ -0.93
ITSN1-223	ENST00000465143	ECHDC1	Q9NTX5	307 aa		9.26	□□□□□ -0.93
ITSN1-223	ENST00000465143	TSKS	Q9UJT2	592 aa		9.26	□□□□□ -0.93
ITSN1-223	ENST00000465143	CSAD	Q9Y600	493 aa		9.26	□□□□□ -0.93
ITSN1-223	ENST00000465143	ERC2	O15083	957 aa		9.25	□□□□□ -0.93
ITSN1-223	ENST00000465143	IGSF3	O75054	1194 aa		9.25	□□□□□ -0.93
ITSN1-223	ENST00000465143	ENTPD3	O75355	529 aa		9.25	□□□□□ -0.93
ITSN1-223	ENST00000465143	SDS	P20132	328 aa		9.25	□□□□□ -0.93
ITSN1-223	ENST00000465143	CYP7A1	P22680	504 aa		9.25	□□□□□ -0.93
ITSN1-223	ENST00000465143	SREBF2	Q12772	1141 aa		9.25	□□□□□ -0.93
ITSN1-223	ENST00000465143	TTF1	Q15361	905 aa	Predicted RBP	9.25	□□□□□ -0.93
ITSN1-223	ENST00000465143	SPRYD7	Q5W111	196 aa		9.25	□□□□□ -0.93
ITSN1-223	ENST00000465143	TEX11	Q8IYF3	940 aa		9.25	□□□□□ -0.93
ITSN1-223	ENST00000465143	CLMN	Q96JQ2	1002 aa		9.25	□□□□□ -0.93
ITSN1-223	ENST00000465143	WRNIP1	Q96S55	665 aa		9.25	□□□□□ -0.93
ITSN1-223	ENST00000465143	CSRNP1	Q96S65	589 aa		9.25	□□□□□ -0.93
ITSN1-223	ENST00000465143	ZNF341	Q9BYN7	854 aa		9.25	□□□□□ -0.93
ITSN1-223	ENST00000465143	BACH2	Q9BYV9	841 aa		9.25	□□□□□ -0.93
ITSN1-223	ENST00000465143	ELP3	Q9H9T3	547 aa		9.25	□□□□□ -0.93
ITSN1-223	ENST00000465143	PIH1D3	Q9NQM4	214 aa	Known RBP	9.25	□□□□□ -0.93
ITSN1-223	ENST00000465143	TSHZ2	Q9NRE2	1034 aa		9.25	□□□□□ -0.93
ITSN1-223	ENST00000465143	AATF	Q9NY61	560 aa	Known RBP eCLIP	9.25	□□□□□ -0.93
ITSN1-223	ENST00000465143	FAM198A	Q9UFP1	575 aa		9.25	□□□□□ -0.93
ITSN1-223	ENST00000465143	NDUFB9	Q9Y6M9	179 aa		9.25	□□□□□ -0.93
ITSN1-223	ENST00000465143	GOLIM4	O00461	696 aa		9.24	□□□□□ -0.93
ITSN1-223	ENST00000465143	HR	O43593	1189 aa		9.24	□□□□□ -0.93
ITSN1-223	ENST00000465143	GLRX3	O76003	335 aa	Known RBP	9.24	□□□□□ -0.93
ITSN1-223	ENST00000465143	MAP4K4	O95819	1239 aa	Predicted RBP	9.24	□□□□□ -0.93
ITSN1-223	ENST00000465143	ZBTB48	P10074	688 aa	Predicted RBP	9.24	□□□□□ -0.93
ITSN1-223	ENST00000465143	HSPA8	P11142	646 aa	Known RBP	9.24	□□□□□ -0.93
ITSN1-223	ENST00000465143	VGLL4	Q14135	290 aa		9.24	□□□□□ -0.93
ITSN1-223	ENST00000465143	MAGEB6	Q8N7X4	407 aa		9.24	□□□□□ -0.93
ITSN1-223	ENST00000465143	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	9.24	□□□□□ -0.93
ITSN1-223	ENST00000465143	PTCD2	Q8WV60	388 aa	Known RBP	9.24	□□□□□ -0.93
ITSN1-223	ENST00000465143	WNK4	Q96J92	1243 aa		9.24	□□□□□ -0.93
ITSN1-223	ENST00000465143	IDI2	Q9BXS1	227 aa		9.24	□□□□□ -0.93
ITSN1-223	ENST00000465143	BOLA2	Q9H3K6	86 aa		9.24	□□□□□ -0.93
ITSN1-223	ENST00000465143	ANTXR1	Q9H6X2	564 aa		9.24	□□□□□ -0.93
ITSN1-223	ENST00000465143	PRDM10	Q9NQV6	1147 aa		9.24	□□□□□ -0.93
ITSN1-223	ENST00000465143	RNF186	Q9NXI6	227 aa		9.24	□□□□□ -0.93
ITSN1-223	ENST00000465143	RPAP1	Q9BWH6	1393 aa	Predicted RBP	9.24	□□□□□ -0.93
ITSN1-223	ENST00000465143	MANSC4	A6NHS7	340 aa	Predicted RBP	9.23	□□□□□ -0.93
ITSN1-223	ENST00000465143	TRIM6-TRIM34	B2RNG4	842 aa		9.23	□□□□□ -0.93
ITSN1-223	ENST00000465143	WDHD1	O75717	1129 aa	Predicted RBP	9.23	□□□□□ -0.93
ITSN1-223	ENST00000465143	TRPA1	O75762	1119 aa		9.23	□□□□□ -0.93
ITSN1-223	ENST00000465143	ATP5J	P18859	108 aa		9.23	□□□□□ -0.93
ITSN1-223	ENST00000465143	COL13A1	Q5TAT6	717 aa	Predicted RBP	9.23	□□□□□ -0.93
ITSN1-223	ENST00000465143	ZFPM1	Q8IX07	1006 aa		9.23	□□□□□ -0.93
ITSN1-223	ENST00000465143	MIGA1	Q8NAN2	632 aa		9.23	□□□□□ -0.93
ITSN1-223	ENST00000465143	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	9.23	□□□□□ -0.93
ITSN1-223	ENST00000465143	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	9.23	□□□□□ -0.93
ITSN1-223	ENST00000465143	ZNF384	Q8TF68	577 aa		9.23	□□□□□ -0.93
ITSN1-223	ENST00000465143	RILPL2	Q969X0	211 aa		9.23	□□□□□ -0.93
ITSN1-223	ENST00000465143	OPTN	Q96CV9	577 aa		9.23	□□□□□ -0.93
ITSN1-223	ENST00000465143	TRIM34	Q9BYJ4	488 aa		9.23	□□□□□ -0.93
ITSN1-223	ENST00000465143	SAGE1	Q9NXZ1	904 aa		9.23	□□□□□ -0.93
ITSN1-223	ENST00000465143	SSC5D	A1L4H1	1573 aa		9.23	□□□□□ -0.93
ITSN1-223	ENST00000465143	CEP350	Q5VT06	3117 aa		9.22	□□□□□ -0.93
ITSN1-223	ENST00000465143	CDC45	O75419	566 aa		9.22	□□□□□ -0.93
ITSN1-223	ENST00000465143	RHBDL3	P58872	404 aa		9.22	□□□□□ -0.93
ITSN1-223	ENST00000465143	SLC9C2	Q5TAH2	1124 aa		9.22	□□□□□ -0.93
ITSN1-223	ENST00000465143	OTUD7B	Q6GQQ9	843 aa		9.22	□□□□□ -0.93
ITSN1-223	ENST00000465143	TMED8	Q6PL24	325 aa	Predicted RBP	9.22	□□□□□ -0.93
ITSN1-223	ENST00000465143	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	9.22	□□□□□ -0.93
ITSN1-223	ENST00000465143	CERS3	Q8IU89	383 aa		9.22	□□□□□ -0.93
ITSN1-223	ENST00000465143	MAPKAPK5	Q8IW41	473 aa		9.22	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms