RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 PRUNE2Q8WUY3 3088 aa12.09□□□□□ -0.47
APP-213ENST00000464867 TNPO2O14787 897 aaKnown RBP12.09□□□□□ -0.47
APP-213ENST00000464867 HOXB7P09629 217 aa12.09□□□□□ -0.47
APP-213ENST00000464867 DNAJB2P25686 324 aa12.09□□□□□ -0.47
APP-213ENST00000464867 KLRK1P26718 216 aa12.09□□□□□ -0.47
APP-213ENST00000464867 RIPK4P57078 832 aa12.09□□□□□ -0.47
APP-213ENST00000464867 IRF5Q13568 498 aa12.09□□□□□ -0.47
APP-213ENST00000464867 ZNF804AQ7Z570 1209 aa12.09□□□□□ -0.47
APP-213ENST00000464867 TTLL11Q8NHH1 800 aa12.09□□□□□ -0.47
APP-213ENST00000464867 ZKSCAN4Q969J2 545 aaPredicted RBP12.09□□□□□ -0.47
APP-213ENST00000464867 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.09□□□□□ -0.47
APP-213ENST00000464867 TMEM134Q9H6X4 195 aa12.09□□□□□ -0.47
APP-213ENST00000464867 GREM2Q9H772 168 aa12.09□□□□□ -0.47
APP-213ENST00000464867 RCCD1A6NED2 376 aa12.08□□□□□ -0.48
APP-213ENST00000464867 DCAF15Q66K64 600 aa12.08□□□□□ -0.48
APP-213ENST00000464867 COA7Q96BR5 231 aa12.08□□□□□ -0.48
APP-213ENST00000464867 LBHD1Q9BQE6 289 aaPredicted RBP12.08□□□□□ -0.48
APP-213ENST00000464867 IL21Q9HBE4 155 aa12.08□□□□□ -0.48
APP-213ENST00000464867 SERPINA10Q9UK55 444 aa12.08□□□□□ -0.48
APP-213ENST00000464867 ARAP2Q8WZ64 1704 aa12.08□□□□□ -0.48
APP-213ENST00000464867 LAMA2P24043 3122 aaKnown RBP12.08□□□□□ -0.48
APP-213ENST00000464867 AOX1Q06278 1338 aa12.08□□□□□ -0.48
APP-213ENST00000464867 GPR37O15354 613 aa12.07□□□□□ -0.48
APP-213ENST00000464867 BCRP11274 1271 aa12.07□□□□□ -0.48
APP-213ENST00000464867 MDM2Q00987 491 aaPredicted RBP12.07□□□□□ -0.48
APP-213ENST00000464867 DZIP1LQ8IYY4 767 aaKnown RBP12.07□□□□□ -0.48
APP-213ENST00000464867 TTF2Q9UNY4 1162 aaKnown RBP12.07□□□□□ -0.48
APP-213ENST00000464867 LAS1LQ9Y4W2 734 aaKnown RBP12.07□□□□□ -0.48
APP-213ENST00000464867 NCOR1O75376 2440 aa12.06□□□□□ -0.48
APP-213ENST00000464867 IL1R1P14778 569 aa12.06□□□□□ -0.48
APP-213ENST00000464867 FOSL2P15408 326 aa12.06□□□□□ -0.48
APP-213ENST00000464867 FECHP22830 423 aa12.06□□□□□ -0.48
APP-213ENST00000464867 MAP3K12Q12852 859 aa12.06□□□□□ -0.48
APP-213ENST00000464867 KRT24Q2M2I5 525 aa12.06□□□□□ -0.48
APP-213ENST00000464867 SEMA6BQ9H3T3 888 aa12.06□□□□□ -0.48
APP-213ENST00000464867 HMX1Q9NP08 348 aaPredicted RBP12.06□□□□□ -0.48
APP-213ENST00000464867 TMOD2Q9NZR1 351 aa12.06□□□□□ -0.48
APP-213ENST00000464867 JAG2Q9Y219 1238 aa12.06□□□□□ -0.48
APP-213ENST00000464867 MUC3AQ02505 3323 aa12.06□□□□□ -0.48
APP-213ENST00000464867 DDX60LQ5H9U9 1706 aaKnown RBP12.06□□□□□ -0.48
APP-213ENST00000464867 DDX58O95786 925 aaKnown RBP12.05□□□□□ -0.48
APP-213ENST00000464867 CYP2C8P10632 490 aa12.05□□□□□ -0.48
APP-213ENST00000464867 MYLIPQ8WY64 445 aa12.05□□□□□ -0.48
APP-213ENST00000464867 ZNF341Q9BYN7 854 aa12.05□□□□□ -0.48
APP-213ENST00000464867 CHL1O00533 1208 aa12.04□□□□□ -0.48
APP-213ENST00000464867 COPS2P61201 443 aa12.04□□□□□ -0.48
APP-213ENST00000464867 CHRNDQ07001 517 aa12.04□□□□□ -0.48
APP-213ENST00000464867 HIC1Q14526 733 aa12.04□□□□□ -0.48
APP-213ENST00000464867 MFSD14BQ5SR56 506 aa12.04□□□□□ -0.48
APP-213ENST00000464867 SMYD5Q6GMV2 418 aa12.04□□□□□ -0.48
APP-213ENST00000464867 C15orf52Q6ZUT6 534 aaKnown RBP12.04□□□□□ -0.48
APP-213ENST00000464867 CLSPNQ9HAW4 1339 aa12.04□□□□□ -0.48
APP-213ENST00000464867 DOCK3Q8IZD9 2030 aa12.03□□□□□ -0.48
APP-213ENST00000464867 HMGCRP04035 888 aa12.03□□□□□ -0.48
APP-213ENST00000464867 ITGA6P23229 1130 aa12.03□□□□□ -0.48
APP-213ENST00000464867 CRKP46108 304 aa12.03□□□□□ -0.48
APP-213ENST00000464867 FASTKD5Q7L8L6 764 aaKnown RBP12.03□□□□□ -0.48
APP-213ENST00000464867 SMCR8Q8TEV9 937 aaPredicted RBP12.03□□□□□ -0.48
APP-213ENST00000464867 METTL22Q9BUU2 404 aaPredicted RBP12.03□□□□□ -0.48
APP-213ENST00000464867 PRKAG2Q9UGJ0 569 aa12.03□□□□□ -0.48
APP-213ENST00000464867 KCNH4Q9UQ05 1017 aa12.03□□□□□ -0.48
APP-213ENST00000464867 COL2A1P02458 1487 aaPredicted RBP12.02□□□□□ -0.48
APP-213ENST00000464867 BDP1A6H8Y1 2624 aa12.02□□□□□ -0.49
APP-213ENST00000464867 AK9Q5TCS8 1911 aa12.02□□□□□ -0.49
APP-213ENST00000464867 SLC4A3P48751 1232 aa12.02□□□□□ -0.49
APP-213ENST00000464867 NEXNQ0ZGT2 675 aa12.02□□□□□ -0.49
APP-213ENST00000464867 PHAXQ9H814 394 aaKnown RBP12.02□□□□□ -0.49
APP-213ENST00000464867 OGDHLQ9ULD0 1010 aa12.02□□□□□ -0.49
APP-213ENST00000464867 CXCL11O14625 94 aa12.01□□□□□ -0.49
APP-213ENST00000464867 TAF5LO75529 589 aa12.01□□□□□ -0.49
APP-213ENST00000464867 DUSP27Q5VZP5 1158 aa12.01□□□□□ -0.49
APP-213ENST00000464867 MIGA2Q7L4E1 593 aa12.01□□□□□ -0.49
APP-213ENST00000464867 FAM83AQ86UY5 434 aa12.01□□□□□ -0.49
APP-213ENST00000464867 IRX2Q9BZI1 471 aaPredicted RBP12.01□□□□□ -0.49
APP-213ENST00000464867 INPP5BP32019 993 aa12□□□□□ -0.49
APP-213ENST00000464867 PPP1R18Q6NYC8 613 aa12□□□□□ -0.49
APP-213ENST00000464867 METTL3Q86U44 580 aaKnown RBP12□□□□□ -0.49
APP-213ENST00000464867 IL27Q8NEV9 243 aa12□□□□□ -0.49
APP-213ENST00000464867 C1QTNF1Q9BXJ1 281 aa12□□□□□ -0.49
APP-213ENST00000464867 CHMP4AQ9BY43 222 aa12□□□□□ -0.49
APP-213ENST00000464867 HCN4Q9Y3Q4 1203 aa12□□□□□ -0.49
APP-213ENST00000464867 ANKRD18BA2A2Z9 1011 aa11.99□□□□□ -0.49
APP-213ENST00000464867 SNAP23O00161 211 aa11.99□□□□□ -0.49
APP-213ENST00000464867 OATP04181 439 aa11.99□□□□□ -0.49
APP-213ENST00000464867 TMPOP42166 694 aaKnown RBP11.99□□□□□ -0.49
APP-213ENST00000464867 CACNB3P54284 484 aa11.99□□□□□ -0.49
APP-213ENST00000464867 MOGSQ13724 837 aa11.99□□□□□ -0.49
APP-213ENST00000464867 FKBP1CQ5VVH2 108 aa11.99□□□□□ -0.49
APP-213ENST00000464867 GPAT2Q6NUI2 795 aa11.99□□□□□ -0.49
APP-213ENST00000464867 GADL1Q6ZQY3 521 aa11.99□□□□□ -0.49
APP-213ENST00000464867 TEKT1Q969V4 418 aa11.99□□□□□ -0.49
APP-213ENST00000464867 MAP3K2Q9Y2U5 619 aa11.99□□□□□ -0.49
APP-213ENST00000464867 SLC45A1Q9Y2W3 748 aa11.99□□□□□ -0.49
APP-213ENST00000464867 PFASO15067 1338 aa11.99□□□□□ -0.49
APP-213ENST00000464867 PIEZO1Q92508 2521 aa11.98□□□□□ -0.49
APP-213ENST00000464867 SYNGAP1Q96PV0 1343 aa11.98□□□□□ -0.49
APP-213ENST00000464867 SMAD3P84022 425 aaKnown RBP11.98□□□□□ -0.49
APP-213ENST00000464867 HDLBPQ00341 1268 aaKnown RBP11.98□□□□□ -0.49
APP-213ENST00000464867 NEUROD2Q15784 382 aa11.98□□□□□ -0.49
APP-213ENST00000464867 LRRC26Q2I0M4 334 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms