RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 CEP41Q9BYV8 373 aa5.67□□□□□ -1.5
HMGXB4-205ENST00000464480 AKTIPQ9H8T0 292 aa5.67□□□□□ -1.5
HMGXB4-205ENST00000464480 EHMT1Q9H9B1 1298 aa5.67□□□□□ -1.5
HMGXB4-205ENST00000464480 ZNF408Q9H9D4 720 aa5.67□□□□□ -1.5
HMGXB4-205ENST00000464480 PIDD1Q9HB75 910 aa5.67□□□□□ -1.5
HMGXB4-205ENST00000464480 CRIM1Q9NZV1 1036 aa5.67□□□□□ -1.5
HMGXB4-205ENST00000464480 ADAM30Q9UKF2 790 aa5.67□□□□□ -1.5
HMGXB4-205ENST00000464480 PPP1R9AQ9ULJ8 1098 aa5.67□□□□□ -1.5
HMGXB4-205ENST00000464480 HIF3AQ9Y2N7 669 aa5.67□□□□□ -1.5
HMGXB4-205ENST00000464480 PRR36Q9H6K5 1346 aa5.67□□□□□ -1.5
HMGXB4-205ENST00000464480 SART1O43290 800 aaKnown RBP5.66□□□□□ -1.5
HMGXB4-205ENST00000464480 HTR3BO95264 441 aa5.66□□□□□ -1.5
HMGXB4-205ENST00000464480 TIAF1O95411 115 aa5.66□□□□□ -1.5
HMGXB4-205ENST00000464480 PGRP06401 933 aa5.66□□□□□ -1.5
HMGXB4-205ENST00000464480 GRK4P32298 578 aa5.66□□□□□ -1.5
HMGXB4-205ENST00000464480 LRRFIP1Q32MZ4 808 aaKnown RBP5.66□□□□□ -1.5
HMGXB4-205ENST00000464480 TNNI3KQ59H18 835 aa5.66□□□□□ -1.5
HMGXB4-205ENST00000464480 PPM1JQ5JR12 505 aa5.66□□□□□ -1.5
HMGXB4-205ENST00000464480 RNF214Q8ND24 703 aa5.66□□□□□ -1.5
HMGXB4-205ENST00000464480 ANAPC16Q96DE5 110 aa5.66□□□□□ -1.5
HMGXB4-205ENST00000464480 SHDQ96IW2 340 aa5.66□□□□□ -1.5
HMGXB4-205ENST00000464480 WNT10AQ9GZT5 417 aa5.66□□□□□ -1.5
HMGXB4-205ENST00000464480 REV1Q9UBZ9 1251 aa5.66□□□□□ -1.5
HMGXB4-205ENST00000464480 R3HCC1Q9Y3T6 440 aaKnown RBP5.66□□□□□ -1.5
HMGXB4-205ENST00000464480 MRVI1Q9Y6F6 885 aa5.66□□□□□ -1.5
HMGXB4-205ENST00000464480 MEIS3P2A8K0S8 358 aa5.65□□□□□ -1.5
HMGXB4-205ENST00000464480 GAS2O43903 313 aaKnown RBP5.65□□□□□ -1.5
HMGXB4-205ENST00000464480 GLB1P16278 677 aa5.65□□□□□ -1.5
HMGXB4-205ENST00000464480 COL8A1P27658 744 aa5.65□□□□□ -1.5
HMGXB4-205ENST00000464480 RING1Q06587 406 aa5.65□□□□□ -1.5
HMGXB4-205ENST00000464480 PLA2G4EQ3MJ16 856 aa5.65□□□□□ -1.5
HMGXB4-205ENST00000464480 ZBTB37Q5TC79 503 aa5.65□□□□□ -1.5
HMGXB4-205ENST00000464480 DYMQ7RTS9 669 aa5.65□□□□□ -1.5
HMGXB4-205ENST00000464480 KCT2Q8NC54 265 aa5.65□□□□□ -1.5
HMGXB4-205ENST00000464480 ZNF507Q8TCN5 953 aa5.65□□□□□ -1.5
HMGXB4-205ENST00000464480 CORINQ9Y5Q5 1042 aa5.65□□□□□ -1.5
HMGXB4-205ENST00000464480 ETFBP38117 255 aa5.64□□□□□ -1.51
HMGXB4-205ENST00000464480 GIPRP48546 466 aa5.64□□□□□ -1.51
HMGXB4-205ENST00000464480 RBL2Q08999 1139 aa5.64□□□□□ -1.51
HMGXB4-205ENST00000464480 TTLL4Q14679 1199 aa5.64□□□□□ -1.51
HMGXB4-205ENST00000464480 UVSSAQ2YD98 709 aa5.64□□□□□ -1.51
HMGXB4-205ENST00000464480 TMEM201Q5SNT2 666 aa5.64□□□□□ -1.51
HMGXB4-205ENST00000464480 NBPF6Q5VWK0 638 aa5.64□□□□□ -1.51
HMGXB4-205ENST00000464480 Q6ZS46 218 aa5.64□□□□□ -1.51
HMGXB4-205ENST00000464480 CDC37L1Q7L3B6 337 aa5.64□□□□□ -1.51
HMGXB4-205ENST00000464480 LSRQ86X29 649 aaPredicted RBP5.64□□□□□ -1.51
HMGXB4-205ENST00000464480 RBBP8NLQ8NC74 664 aaPredicted RBP5.64□□□□□ -1.51
HMGXB4-205ENST00000464480 PMFBP1Q8TBY8 1022 aa5.64□□□□□ -1.51
HMGXB4-205ENST00000464480 TMEM40Q8WWA1 233 aa5.64□□□□□ -1.51
HMGXB4-205ENST00000464480 NBPF4Q96M43 638 aa5.64□□□□□ -1.51
HMGXB4-205ENST00000464480 YIPF2Q9BWQ6 316 aa5.64□□□□□ -1.51
HMGXB4-205ENST00000464480 DISC1Q9NRI5 854 aa5.64□□□□□ -1.51
HMGXB4-205ENST00000464480 GMIPQ9P107 970 aa5.64□□□□□ -1.51
HMGXB4-205ENST00000464480 PRKAG3Q9UGI9 489 aa5.64□□□□□ -1.51
HMGXB4-205ENST00000464480 ACTL7BQ9Y614 415 aa5.64□□□□□ -1.51
HMGXB4-205ENST00000464480 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.63□□□□□ -1.51
HMGXB4-205ENST00000464480 RNGTTO60942 597 aaKnown RBP5.63□□□□□ -1.51
HMGXB4-205ENST00000464480 ALX3O95076 343 aa5.63□□□□□ -1.51
HMGXB4-205ENST00000464480 HCLS1P14317 486 aaPredicted RBP5.63□□□□□ -1.51
HMGXB4-205ENST00000464480 DRD2P14416 443 aa5.63□□□□□ -1.51
HMGXB4-205ENST00000464480 ASPAP45381 313 aa5.63□□□□□ -1.51
HMGXB4-205ENST00000464480 PREPP48147 710 aa5.63□□□□□ -1.51
HMGXB4-205ENST00000464480 IREB2P48200 963 aaKnown RBP5.63□□□□□ -1.51
HMGXB4-205ENST00000464480 YARSP54577 528 aaKnown RBP5.63□□□□□ -1.51
HMGXB4-205ENST00000464480 ADGRE1Q14246 886 aa5.63□□□□□ -1.51
HMGXB4-205ENST00000464480 MBTPS1Q14703 1052 aa5.63□□□□□ -1.51
HMGXB4-205ENST00000464480 OVOS1Q6IE37 1185 aa5.63□□□□□ -1.51
HMGXB4-205ENST00000464480 ANKS3Q6ZW76 656 aa5.63□□□□□ -1.51
HMGXB4-205ENST00000464480 HID1Q8IV36 788 aa5.63□□□□□ -1.51
HMGXB4-205ENST00000464480 C2CD4AQ8NCU7 369 aaPredicted RBP5.63□□□□□ -1.51
HMGXB4-205ENST00000464480 WFDC12Q8WWY7 111 aa5.63□□□□□ -1.51
HMGXB4-205ENST00000464480 TM9SF2Q99805 663 aa5.63□□□□□ -1.51
HMGXB4-205ENST00000464480 TRIM55Q9BYV6 548 aa5.63□□□□□ -1.51
HMGXB4-205ENST00000464480 GSX1Q9H4S2 264 aaPredicted RBP5.63□□□□□ -1.51
HMGXB4-205ENST00000464480 SSU72Q9NP77 194 aaKnown RBP5.63□□□□□ -1.51
HMGXB4-205ENST00000464480 KLHL3Q9UH77 587 aa5.63□□□□□ -1.51
HMGXB4-205ENST00000464480 U2SURPO15042 1029 aaKnown RBP5.62□□□□□ -1.51
HMGXB4-205ENST00000464480 NOS3P29474 1203 aa5.62□□□□□ -1.51
HMGXB4-205ENST00000464480 NTF4P34130 210 aa5.62□□□□□ -1.51
HMGXB4-205ENST00000464480 USP11P51784 963 aa5.62□□□□□ -1.51
HMGXB4-205ENST00000464480 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.62□□□□□ -1.51
HMGXB4-205ENST00000464480 TXNRD3Q86VQ6 643 aa5.62□□□□□ -1.51
HMGXB4-205ENST00000464480 SMYD4Q8IYR2 804 aaPredicted RBP5.62□□□□□ -1.51
HMGXB4-205ENST00000464480 FAM13CQ8NE31 585 aa5.62□□□□□ -1.51
HMGXB4-205ENST00000464480 ISL2Q96A47 359 aa5.62□□□□□ -1.51
HMGXB4-205ENST00000464480 ACSF2Q96CM8 615 aaPredicted RBP5.62□□□□□ -1.51
HMGXB4-205ENST00000464480 TMEM87BQ96K49 555 aa5.62□□□□□ -1.51
HMGXB4-205ENST00000464480 SPOCK3Q9BQ16 436 aa5.62□□□□□ -1.51
HMGXB4-205ENST00000464480 FAM105AQ9NUU6 356 aa5.62□□□□□ -1.51
HMGXB4-205ENST00000464480 ACTR10Q9NZ32 417 aa5.62□□□□□ -1.51
HMGXB4-205ENST00000464480 KRBA1A5PL33 1030 aa5.61□□□□□ -1.51
HMGXB4-205ENST00000464480 SMAD7O15105 426 aaKnown RBP5.61□□□□□ -1.51
HMGXB4-205ENST00000464480 NEFMP07197 916 aa5.61□□□□□ -1.51
HMGXB4-205ENST00000464480 RAB6AP20340 208 aa5.61□□□□□ -1.51
HMGXB4-205ENST00000464480 GUCY2CP25092 1073 aa5.61□□□□□ -1.51
HMGXB4-205ENST00000464480 SLC6A19Q695T7 634 aa5.61□□□□□ -1.51
HMGXB4-205ENST00000464480 DPH6Q7L8W6 267 aa5.61□□□□□ -1.51
HMGXB4-205ENST00000464480 NLRC3Q7RTR2 1065 aa5.61□□□□□ -1.51
HMGXB4-205ENST00000464480 MCATQ8IVS2 390 aaKnown RBP5.61□□□□□ -1.51
HMGXB4-205ENST00000464480 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms