RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 PSMD14O00487 310 aa17■□□□□ 0.31
COL5A1-205ENST00000464187 CRKP46108 304 aa17■□□□□ 0.31
COL5A1-205ENST00000464187 MFSD6Q6ZSS7 791 aa17■□□□□ 0.31
COL5A1-205ENST00000464187 TEX11Q8IYF3 940 aa17■□□□□ 0.31
COL5A1-205ENST00000464187 STK11IPQ8N1F8 1099 aa17■□□□□ 0.31
COL5A1-205ENST00000464187 ANP32BQ92688 251 aaKnown RBP17■□□□□ 0.31
COL5A1-205ENST00000464187 MRIQ9BWK5 157 aa17■□□□□ 0.31
COL5A1-205ENST00000464187 TSPY26PQ9H489 355 aa17■□□□□ 0.31
COL5A1-205ENST00000464187 MCM9Q9NXL9 1143 aa17■□□□□ 0.31
COL5A1-205ENST00000464187 ARPP21Q9UBL0 812 aaPredicted RBP17■□□□□ 0.31
COL5A1-205ENST00000464187 TACC3Q9Y6A5 838 aa17■□□□□ 0.31
COL5A1-205ENST00000464187 LTBP3Q9NS15 1303 aa16.99■□□□□ 0.31
COL5A1-205ENST00000464187 FER1L6Q2WGJ9 1857 aa16.99■□□□□ 0.31
COL5A1-205ENST00000464187 B4E1Z4 1266 aa16.99■□□□□ 0.31
COL5A1-205ENST00000464187 VIL1P09327 827 aaKnown RBP16.99■□□□□ 0.31
COL5A1-205ENST00000464187 MCM5P33992 734 aa16.99■□□□□ 0.31
COL5A1-205ENST00000464187 KRT85P78386 507 aa16.99■□□□□ 0.31
COL5A1-205ENST00000464187 HDLBPQ00341 1268 aaKnown RBP16.99■□□□□ 0.31
COL5A1-205ENST00000464187 RASSF7Q02833 373 aa16.99■□□□□ 0.31
COL5A1-205ENST00000464187 APOBEC3HQ6NTF7 200 aaKnown RBP16.99■□□□□ 0.31
COL5A1-205ENST00000464187 RSBN1LQ6PCB5 846 aaPredicted RBP16.99■□□□□ 0.31
COL5A1-205ENST00000464187 LLPHQ9BRT6 129 aaKnown RBP16.99■□□□□ 0.31
COL5A1-205ENST00000464187 SYT17Q9BSW7 474 aa16.99■□□□□ 0.31
COL5A1-205ENST00000464187 MYO3BQ8WXR4 1341 aa16.99■□□□□ 0.31
COL5A1-205ENST00000464187 USP17L8P0C7I0 530 aa16.98■□□□□ 0.31
COL5A1-205ENST00000464187 TPRNQ4KMQ1 711 aa16.98■□□□□ 0.31
COL5A1-205ENST00000464187 SBK1Q52WX2 424 aa16.98■□□□□ 0.31
COL5A1-205ENST00000464187 FAM173BQ6P4H8 233 aa16.98■□□□□ 0.31
COL5A1-205ENST00000464187 TTC6Q86TZ1 520 aa16.98■□□□□ 0.31
COL5A1-205ENST00000464187 MAPKAPK5Q8IW41 473 aa16.98■□□□□ 0.31
COL5A1-205ENST00000464187 NSUN7Q8NE18 718 aaKnown RBP16.98■□□□□ 0.31
COL5A1-205ENST00000464187 NKX2-3Q8TAU0 364 aa16.98■□□□□ 0.31
COL5A1-205ENST00000464187 ZDHHC15Q96MV8 337 aa16.98■□□□□ 0.31
COL5A1-205ENST00000464187 RNF41Q9H4P4 317 aaPredicted RBP16.98■□□□□ 0.31
COL5A1-205ENST00000464187 CNNM2Q9H8M5 875 aa16.98■□□□□ 0.31
COL5A1-205ENST00000464187 PRC1O43663 620 aa16.98■□□□□ 0.31
COL5A1-205ENST00000464187 CTDNEP1O95476 244 aa16.98■□□□□ 0.31
COL5A1-205ENST00000464187 ANTXR2P58335 489 aa16.98■□□□□ 0.31
COL5A1-205ENST00000464187 TRIM44Q96DX7 344 aaPredicted RBP16.98■□□□□ 0.31
COL5A1-205ENST00000464187 KRT23Q9C075 422 aa16.98■□□□□ 0.31
COL5A1-205ENST00000464187 TOMM22Q9NS69 142 aa16.98■□□□□ 0.31
COL5A1-205ENST00000464187 SERPINA10Q9UK55 444 aa16.98■□□□□ 0.31
COL5A1-205ENST00000464187 ZNF646O15015 1829 aaPredicted RBP16.97■□□□□ 0.31
COL5A1-205ENST00000464187 RBM5P52756 815 aaKnown RBP eCLIP16.97■□□□□ 0.31
COL5A1-205ENST00000464187 EVX2Q03828 476 aa16.97■□□□□ 0.31
COL5A1-205ENST00000464187 CXCL9Q07325 125 aa16.97■□□□□ 0.31
COL5A1-205ENST00000464187 RESTQ13127 1097 aa16.97■□□□□ 0.31
COL5A1-205ENST00000464187 SLC4A8Q2Y0W8 1093 aa16.97■□□□□ 0.31
COL5A1-205ENST00000464187 FBXL16Q8N461 479 aa16.97■□□□□ 0.31
COL5A1-205ENST00000464187 DDX11Q96FC9 970 aa16.97■□□□□ 0.31
COL5A1-205ENST00000464187 ZBTB12Q9Y330 459 aaPredicted RBP16.97■□□□□ 0.31
COL5A1-205ENST00000464187 PCDHAC2Q9Y5I4 1007 aa16.97■□□□□ 0.31
COL5A1-205ENST00000464187 ELP1O95163 1332 aa16.97■□□□□ 0.31
COL5A1-205ENST00000464187 FLT1P17948 1338 aa16.97■□□□□ 0.31
COL5A1-205ENST00000464187 TIAM2Q8IVF5 1701 aa16.96■□□□□ 0.31
COL5A1-205ENST00000464187 KDM4AO75164 1064 aa16.96■□□□□ 0.31
COL5A1-205ENST00000464187 CYP2D6P10635 497 aa16.96■□□□□ 0.31
COL5A1-205ENST00000464187 RRP12Q5JTH9 1297 aaKnown RBP16.96■□□□□ 0.31
COL5A1-205ENST00000464187 CDC42EP5Q6NZY7 148 aa16.96■□□□□ 0.31
COL5A1-205ENST00000464187 CYB5R4Q7L1T6 521 aa16.96■□□□□ 0.31
COL5A1-205ENST00000464187 ZNF274Q96GC6 653 aaPredicted RBP16.96■□□□□ 0.31
COL5A1-205ENST00000464187 GMLQ99445 158 aa16.96■□□□□ 0.31
COL5A1-205ENST00000464187 USP40Q9NVE5 1235 aa16.96■□□□□ 0.31
COL5A1-205ENST00000464187 WDR19Q8NEZ3 1342 aa16.96■□□□□ 0.31
COL5A1-205ENST00000464187 PTPDC1A2A3K4 754 aa16.96■□□□□ 0.3
COL5A1-205ENST00000464187 PDIA3P30101 505 aaKnown RBP16.96■□□□□ 0.3
COL5A1-205ENST00000464187 PRELPP51888 382 aa16.96■□□□□ 0.3
COL5A1-205ENST00000464187 C12orf60Q5U649 245 aa16.96■□□□□ 0.3
COL5A1-205ENST00000464187 AMOTL1Q8IY63 956 aa16.96■□□□□ 0.3
COL5A1-205ENST00000464187 RNF214Q8ND24 703 aa16.96■□□□□ 0.3
COL5A1-205ENST00000464187 PDLIM2Q96JY6 352 aa16.96■□□□□ 0.3
COL5A1-205ENST00000464187 ZSWIM5Q9P217 1185 aa16.96■□□□□ 0.3
COL5A1-205ENST00000464187 BAZ2AQ9UIF9 1905 aaKnown RBP16.95■□□□□ 0.3
COL5A1-205ENST00000464187 ECM29Q5VYK3 1845 aa16.95■□□□□ 0.3
COL5A1-205ENST00000464187 WDHD1O75717 1129 aaPredicted RBP16.95■□□□□ 0.3
COL5A1-205ENST00000464187 FGRP09769 529 aa16.95■□□□□ 0.3
COL5A1-205ENST00000464187 CCT2P78371 535 aaKnown RBP16.95■□□□□ 0.3
COL5A1-205ENST00000464187 PICALMQ13492 652 aa16.95■□□□□ 0.3
COL5A1-205ENST00000464187 CIAPIN1Q6FI81 312 aa16.95■□□□□ 0.3
COL5A1-205ENST00000464187 FAM184AQ8NB25 1140 aa16.95■□□□□ 0.3
COL5A1-205ENST00000464187 NCOA5Q9HCD5 579 aaKnown RBP16.95■□□□□ 0.3
COL5A1-205ENST00000464187 SAP30BPQ9UHR5 308 aaKnown RBP16.95■□□□□ 0.3
COL5A1-205ENST00000464187 ESPNB1AK53 854 aa16.94■□□□□ 0.3
COL5A1-205ENST00000464187 LETM1O95202 739 aaPredicted RBP16.94■□□□□ 0.3
COL5A1-205ENST00000464187 POLR3DP05423 398 aaPredicted RBP16.94■□□□□ 0.3
COL5A1-205ENST00000464187 SLC3A2P08195 630 aaKnown RBP16.94■□□□□ 0.3
COL5A1-205ENST00000464187 PCP11498 1178 aaKnown RBP16.94■□□□□ 0.3
COL5A1-205ENST00000464187 EVCP57679 992 aa16.94■□□□□ 0.3
COL5A1-205ENST00000464187 HMGN5P82970 282 aaKnown RBP16.94■□□□□ 0.3
COL5A1-205ENST00000464187 CFAP100Q494V2 611 aa16.94■□□□□ 0.3
COL5A1-205ENST00000464187 OGFOD1Q8N543 542 aa16.94■□□□□ 0.3
COL5A1-205ENST00000464187 AGBL3Q8NEM8 1001 aa16.94■□□□□ 0.3
COL5A1-205ENST00000464187 GPHNQ9NQX3 736 aaPredicted RBP16.94■□□□□ 0.3
COL5A1-205ENST00000464187 ARFGEF1Q9Y6D6 1849 aa16.94■□□□□ 0.3
COL5A1-205ENST00000464187 H3BQV1 296 aa16.93■□□□□ 0.3
COL5A1-205ENST00000464187 PRDM1O75626 825 aa16.93■□□□□ 0.3
COL5A1-205ENST00000464187 PLCD1P51178 756 aa16.93■□□□□ 0.3
COL5A1-205ENST00000464187 IFFO2Q5TF58 517 aa16.93■□□□□ 0.3
COL5A1-205ENST00000464187 ARHGAP27Q6ZUM4 889 aa16.93■□□□□ 0.3
COL5A1-205ENST00000464187 ESR2Q92731 530 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms