RNA–Protein interactions for RNA: ENST00000464045.1

THUMPD3-208, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-208ENST00000464045 CEP290O15078 2479 aa9.01□□□□□ -0.97
THUMPD3-208ENST00000464045 SMARCA5O60264 1052 aaPredicted RBP9.01□□□□□ -0.97
THUMPD3-208ENST00000464045 CTNND1O60716 968 aaKnown RBP9.01□□□□□ -0.97
THUMPD3-208ENST00000464045 CETPP11597 493 aa9.01□□□□□ -0.97
THUMPD3-208ENST00000464045 PDE6AP16499 860 aa9.01□□□□□ -0.97
THUMPD3-208ENST00000464045 INPP5BP32019 993 aa9.01□□□□□ -0.97
THUMPD3-208ENST00000464045 EVX2Q03828 476 aa9.01□□□□□ -0.97
THUMPD3-208ENST00000464045 SNAPC2Q13487 334 aa9.01□□□□□ -0.97
THUMPD3-208ENST00000464045 SLC9C2Q5TAH2 1124 aa9.01□□□□□ -0.97
THUMPD3-208ENST00000464045 SAMD1Q6SPF0 538 aaPredicted RBP9.01□□□□□ -0.97
THUMPD3-208ENST00000464045 METTL16Q86W50 562 aaKnown RBP9.01□□□□□ -0.97
THUMPD3-208ENST00000464045 SCYL3Q8IZE3 742 aa9.01□□□□□ -0.97
THUMPD3-208ENST00000464045 TGFBRAP1Q8WUH2 860 aa9.01□□□□□ -0.97
THUMPD3-208ENST00000464045 ZKSCAN4Q969J2 545 aaPredicted RBP9.01□□□□□ -0.97
THUMPD3-208ENST00000464045 OTUD5Q96G74 571 aa9.01□□□□□ -0.97
THUMPD3-208ENST00000464045 BOLA2Q9H3K6 86 aa9.01□□□□□ -0.97
THUMPD3-208ENST00000464045 PI4KBQ9UBF8 816 aa9.01□□□□□ -0.97
THUMPD3-208ENST00000464045 NDUFB9Q9Y6M9 179 aa9.01□□□□□ -0.97
THUMPD3-208ENST00000464045 TTC41PQ6P2S7 1318 aa9.01□□□□□ -0.97
THUMPD3-208ENST00000464045 DOCK2Q92608 1830 aa9.01□□□□□ -0.97
THUMPD3-208ENST00000464045 TCRBV5S4A2TA0A5A2 114 aa9□□□□□ -0.97
THUMPD3-208ENST00000464045 IGF2BP3O00425 579 aaKnown RBP eCLIP9□□□□□ -0.97
THUMPD3-208ENST00000464045 ERC2O15083 957 aa9□□□□□ -0.97
THUMPD3-208ENST00000464045 ZSCAN25Q6NSZ9 544 aa9□□□□□ -0.97
THUMPD3-208ENST00000464045 FOXP4Q8IVH2 680 aaPredicted RBP9□□□□□ -0.97
THUMPD3-208ENST00000464045 RIOK1Q9BRS2 568 aaKnown RBP9□□□□□ -0.97
THUMPD3-208ENST00000464045 TBC1D2Q9BYX2 928 aa9□□□□□ -0.97
THUMPD3-208ENST00000464045 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9□□□□□ -0.97
THUMPD3-208ENST00000464045 PICK1Q9NRD5 415 aa9□□□□□ -0.97
THUMPD3-208ENST00000464045 ZBTB47Q9UFB7 747 aaPredicted RBP9□□□□□ -0.97
THUMPD3-208ENST00000464045 TAOK2Q9UL54 1235 aa9□□□□□ -0.97
THUMPD3-208ENST00000464045 KCNH4Q9UQ05 1017 aa9□□□□□ -0.97
THUMPD3-208ENST00000464045 CCL15-CCL14A0A0B4J2E2 113 aa8.99□□□□□ -0.97
THUMPD3-208ENST00000464045 MAGEB6P1A0A0J9YX57 407 aa8.99□□□□□ -0.97
THUMPD3-208ENST00000464045 GPR25O00155 361 aa8.99□□□□□ -0.97
THUMPD3-208ENST00000464045 CXCL11O14625 94 aa8.99□□□□□ -0.97
THUMPD3-208ENST00000464045 IRF6O14896 467 aa8.99□□□□□ -0.97
THUMPD3-208ENST00000464045 HLA-DOAP06340 250 aa8.99□□□□□ -0.97
THUMPD3-208ENST00000464045 PTPRAP18433 802 aa8.99□□□□□ -0.97
THUMPD3-208ENST00000464045 ADD2P35612 726 aa8.99□□□□□ -0.97
THUMPD3-208ENST00000464045 USP5P45974 858 aa8.99□□□□□ -0.97
THUMPD3-208ENST00000464045 DYNLL1P63167 89 aaKnown RBP8.99□□□□□ -0.97
THUMPD3-208ENST00000464045 UBE3CQ15386 1083 aa8.99□□□□□ -0.97
THUMPD3-208ENST00000464045 CCL15Q16663 113 aa8.99□□□□□ -0.97
THUMPD3-208ENST00000464045 LRRFIP1Q32MZ4 808 aaKnown RBP8.99□□□□□ -0.97
THUMPD3-208ENST00000464045 MAPKAPK5Q8IW41 473 aa8.99□□□□□ -0.97
THUMPD3-208ENST00000464045 MIGA1Q8NAN2 632 aa8.99□□□□□ -0.97
THUMPD3-208ENST00000464045 BRI3BPQ8WY22 251 aa8.99□□□□□ -0.97
THUMPD3-208ENST00000464045 PTPN18Q99952 460 aa8.99□□□□□ -0.97
THUMPD3-208ENST00000464045 CRNKL1Q9BZJ0 848 aaKnown RBP8.99□□□□□ -0.97
THUMPD3-208ENST00000464045 BCL11AQ9H165 835 aa8.99□□□□□ -0.97
THUMPD3-208ENST00000464045 EHD4Q9H223 541 aa8.99□□□□□ -0.97
THUMPD3-208ENST00000464045 RWDD1Q9H446 243 aaPredicted RBP8.99□□□□□ -0.97
THUMPD3-208ENST00000464045 GINM1Q9NU53 330 aa8.99□□□□□ -0.97
THUMPD3-208ENST00000464045 ZNF532Q9HCE3 1301 aa8.99□□□□□ -0.97
THUMPD3-208ENST00000464045 GLRX3O76003 335 aaKnown RBP8.98□□□□□ -0.97
THUMPD3-208ENST00000464045 TTC6Q86TZ1 520 aa8.98□□□□□ -0.97
THUMPD3-208ENST00000464045 EDC3Q96F86 508 aaKnown RBP8.98□□□□□ -0.97
THUMPD3-208ENST00000464045 TRIM34Q9BYJ4 488 aa8.98□□□□□ -0.97
THUMPD3-208ENST00000464045 SUPT16HQ9Y5B9 1047 aaKnown RBP8.98□□□□□ -0.97
THUMPD3-208ENST00000464045 A0A0G2JLL6 359 aaPredicted RBP8.97□□□□□ -0.97
THUMPD3-208ENST00000464045 FKTNO75072 461 aa8.97□□□□□ -0.97
THUMPD3-208ENST00000464045 ZFYP08048 801 aaPredicted RBP8.97□□□□□ -0.97
THUMPD3-208ENST00000464045 MX1P20591 662 aa8.97□□□□□ -0.97
THUMPD3-208ENST00000464045 CAP2P40123 477 aa8.97□□□□□ -0.97
THUMPD3-208ENST00000464045 CRHR2Q13324 411 aa8.97□□□□□ -0.97
THUMPD3-208ENST00000464045 PKN2Q16513 984 aaKnown RBP8.97□□□□□ -0.97
THUMPD3-208ENST00000464045 ANKRD45Q5TZF3 282 aa8.97□□□□□ -0.97
THUMPD3-208ENST00000464045 FASTKD5Q7L8L6 764 aaKnown RBP8.97□□□□□ -0.97
THUMPD3-208ENST00000464045 PRRT2Q7Z6L0 340 aaPredicted RBP8.97□□□□□ -0.97
THUMPD3-208ENST00000464045 ANKRD23Q86SG2 305 aa8.97□□□□□ -0.97
THUMPD3-208ENST00000464045 TICAM2Q86XR7 235 aa8.97□□□□□ -0.97
THUMPD3-208ENST00000464045 FAM43AQ8N2R8 423 aa8.97□□□□□ -0.97
THUMPD3-208ENST00000464045 CRACR2BQ8N4Y2 399 aaPredicted RBP8.97□□□□□ -0.97
THUMPD3-208ENST00000464045 KBTBD3Q8NAB2 608 aa8.97□□□□□ -0.97
THUMPD3-208ENST00000464045 EXOC6Q8TAG9 804 aa8.97□□□□□ -0.97
THUMPD3-208ENST00000464045 ZFYVE28Q9HCC9 887 aa8.97□□□□□ -0.97
THUMPD3-208ENST00000464045 ATP8A2Q9NTI2 1148 aa8.97□□□□□ -0.97
THUMPD3-208ENST00000464045 SERPINB13Q9UIV8 391 aa8.97□□□□□ -0.97
THUMPD3-208ENST00000464045 PALD1Q9ULE6 856 aa8.97□□□□□ -0.97
THUMPD3-208ENST00000464045 AFG3L2Q9Y4W6 797 aa8.97□□□□□ -0.97
THUMPD3-208ENST00000464045 ZHX2Q9Y6X8 837 aa8.97□□□□□ -0.97
THUMPD3-208ENST00000464045 SALL3Q9BXA9 1300 aa8.97□□□□□ -0.97
THUMPD3-208ENST00000464045 FOCADQ5VW36 1801 aa8.96□□□□□ -0.97
THUMPD3-208ENST00000464045 BTBD19C9JJ37 291 aa8.96□□□□□ -0.98
THUMPD3-208ENST00000464045 ECM2O94769 699 aaPredicted RBP8.96□□□□□ -0.98
THUMPD3-208ENST00000464045 ASNSP08243 561 aa8.96□□□□□ -0.98
THUMPD3-208ENST00000464045 MOGSQ13724 837 aa8.96□□□□□ -0.98
THUMPD3-208ENST00000464045 TAF1CQ15572 869 aaPredicted RBP8.96□□□□□ -0.98
THUMPD3-208ENST00000464045 TATDN1Q6P1N9 297 aa8.96□□□□□ -0.98
THUMPD3-208ENST00000464045 SMC5Q8IY18 1101 aa8.96□□□□□ -0.98
THUMPD3-208ENST00000464045 PI4K2BQ8TCG2 481 aa8.96□□□□□ -0.98
THUMPD3-208ENST00000464045 DNAJC18Q9H819 358 aa8.96□□□□□ -0.98
THUMPD3-208ENST00000464045 AS3MTQ9HBK9 375 aa8.96□□□□□ -0.98
THUMPD3-208ENST00000464045 STAP2Q9UGK3 403 aa8.96□□□□□ -0.98
THUMPD3-208ENST00000464045 SAP30BPQ9UHR5 308 aaKnown RBP8.96□□□□□ -0.98
THUMPD3-208ENST00000464045 SLC45A1Q9Y2W3 748 aa8.96□□□□□ -0.98
THUMPD3-208ENST00000464045 TRIM17Q9Y577 477 aa8.96□□□□□ -0.98
THUMPD3-208ENST00000464045 BRCA2P51587 3418 aa8.96□□□□□ -0.98
THUMPD3-208ENST00000464045 AK9Q5TCS8 1911 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms