RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 CDK5RAP2Q96SN8 1893 aa19.67■□□□□ 0.74
COL1A1-202ENST00000463440 MAGEB6P1A0A0J9YX57 407 aa19.67■□□□□ 0.74
COL1A1-202ENST00000463440 FAM196BA6NMK8 535 aa19.67■□□□□ 0.74
COL1A1-202ENST00000463440 BTBD19C9JJ37 291 aa19.67■□□□□ 0.74
COL1A1-202ENST00000463440 CXCL11O14625 94 aa19.67■□□□□ 0.74
COL1A1-202ENST00000463440 HLA-DOAP06340 250 aa19.67■□□□□ 0.74
COL1A1-202ENST00000463440 FOXP4Q8IVH2 680 aaPredicted RBP19.67■□□□□ 0.74
COL1A1-202ENST00000463440 EDC3Q96F86 508 aaKnown RBP19.67■□□□□ 0.74
COL1A1-202ENST00000463440 TRIM34Q9BYJ4 488 aa19.67■□□□□ 0.74
COL1A1-202ENST00000463440 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.67■□□□□ 0.74
COL1A1-202ENST00000463440 PALD1Q9ULE6 856 aa19.67■□□□□ 0.74
COL1A1-202ENST00000463440 ZHX2Q9Y6X8 837 aa19.67■□□□□ 0.74
COL1A1-202ENST00000463440 AAMPQ13685 434 aa19.66■□□□□ 0.74
COL1A1-202ENST00000463440 CRACR2BQ8N4Y2 399 aaPredicted RBP19.66■□□□□ 0.74
COL1A1-202ENST00000463440 SAP30BPQ9UHR5 308 aaKnown RBP19.66■□□□□ 0.74
COL1A1-202ENST00000463440 ZNF532Q9HCE3 1301 aa19.66■□□□□ 0.74
COL1A1-202ENST00000463440 DOCK1Q14185 1865 aa19.66■□□□□ 0.74
COL1A1-202ENST00000463440 PKN2Q16513 984 aaKnown RBP19.65■□□□□ 0.74
COL1A1-202ENST00000463440 ANKRD23Q86SG2 305 aa19.65■□□□□ 0.74
COL1A1-202ENST00000463440 RIOK1Q9BRS2 568 aaKnown RBP19.65■□□□□ 0.74
COL1A1-202ENST00000463440 TCRBV5S4A2TA0A5A2 114 aa19.64■□□□□ 0.73
COL1A1-202ENST00000463440 CAP2P40123 477 aa19.64■□□□□ 0.73
COL1A1-202ENST00000463440 ZSCAN25Q6NSZ9 544 aa19.64■□□□□ 0.73
COL1A1-202ENST00000463440 ERO1AQ96HE7 468 aa19.64■□□□□ 0.73
COL1A1-202ENST00000463440 CRNKL1Q9BZJ0 848 aaKnown RBP19.64■□□□□ 0.73
COL1A1-202ENST00000463440 ZBTB47Q9UFB7 747 aaPredicted RBP19.64■□□□□ 0.73
COL1A1-202ENST00000463440 AFG3L2Q9Y4W6 797 aa19.64■□□□□ 0.73
COL1A1-202ENST00000463440 ADD2P35612 726 aa19.63■□□□□ 0.73
COL1A1-202ENST00000463440 SP3Q02447 781 aa19.63■□□□□ 0.73
COL1A1-202ENST00000463440 FASTKD5Q7L8L6 764 aaKnown RBP19.63■□□□□ 0.73
COL1A1-202ENST00000463440 METTL16Q86W50 562 aaKnown RBP19.63■□□□□ 0.73
COL1A1-202ENST00000463440 TBC1D2Q9BYX2 928 aa19.63■□□□□ 0.73
COL1A1-202ENST00000463440 A0A0G2JLL6 359 aaPredicted RBP19.62■□□□□ 0.73
COL1A1-202ENST00000463440 CCDC85CA6NKD9 419 aa19.62■□□□□ 0.73
COL1A1-202ENST00000463440 PDHXO00330 501 aa19.62■□□□□ 0.73
COL1A1-202ENST00000463440 PRRT2Q7Z6L0 340 aaPredicted RBP19.62■□□□□ 0.73
COL1A1-202ENST00000463440 TTC6Q86TZ1 520 aa19.62■□□□□ 0.73
COL1A1-202ENST00000463440 MYH1P12882 1939 aa19.62■□□□□ 0.73
COL1A1-202ENST00000463440 SIPA1L1O43166 1804 aa19.62■□□□□ 0.73
COL1A1-202ENST00000463440 TTC41PQ6P2S7 1318 aa19.61■□□□□ 0.73
COL1A1-202ENST00000463440 TRIM75PA6NK02 468 aa19.61■□□□□ 0.73
COL1A1-202ENST00000463440 TLR2O60603 784 aa19.61■□□□□ 0.73
COL1A1-202ENST00000463440 HDAC1Q13547 482 aaPredicted RBP19.61■□□□□ 0.73
COL1A1-202ENST00000463440 MOGSQ13724 837 aa19.61■□□□□ 0.73
COL1A1-202ENST00000463440 UBE3CQ15386 1083 aa19.61■□□□□ 0.73
COL1A1-202ENST00000463440 SLC4A8Q2Y0W8 1093 aa19.61■□□□□ 0.73
COL1A1-202ENST00000463440 GCC1Q96CN9 775 aa19.61■□□□□ 0.73
COL1A1-202ENST00000463440 DNAJC18Q9H819 358 aa19.61■□□□□ 0.73
COL1A1-202ENST00000463440 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.61■□□□□ 0.73
COL1A1-202ENST00000463440 USP17L5A8MUK1 530 aa19.6■□□□□ 0.73
COL1A1-202ENST00000463440 ASNSP08243 561 aa19.6■□□□□ 0.73
COL1A1-202ENST00000463440 RRP1BQ14684 758 aaKnown RBP19.6■□□□□ 0.73
COL1A1-202ENST00000463440 ARHGEF6Q15052 776 aa19.6■□□□□ 0.73
COL1A1-202ENST00000463440 TSHZ3Q63HK5 1081 aa19.6■□□□□ 0.73
COL1A1-202ENST00000463440 GADL1Q6ZQY3 521 aa19.6■□□□□ 0.73
COL1A1-202ENST00000463440 CCDC84Q86UT8 332 aaPredicted RBP19.6■□□□□ 0.73
COL1A1-202ENST00000463440 LCORLQ8N3X6 602 aa19.6■□□□□ 0.73
COL1A1-202ENST00000463440 CD99L2Q8TCZ2 262 aa19.6■□□□□ 0.73
COL1A1-202ENST00000463440 EHD4Q9H223 541 aa19.6■□□□□ 0.73
COL1A1-202ENST00000463440 AS3MTQ9HBK9 375 aa19.6■□□□□ 0.73
COL1A1-202ENST00000463440 GINM1Q9NU53 330 aa19.6■□□□□ 0.73
COL1A1-202ENST00000463440 SERPINB13Q9UIV8 391 aa19.6■□□□□ 0.73
COL1A1-202ENST00000463440 TRIM17Q9Y577 477 aa19.6■□□□□ 0.73
COL1A1-202ENST00000463440 ERC2O15083 957 aa19.59■□□□□ 0.73
COL1A1-202ENST00000463440 MBD4O95243 580 aa19.59■□□□□ 0.73
COL1A1-202ENST00000463440 POLR3DP05423 398 aaPredicted RBP19.59■□□□□ 0.73
COL1A1-202ENST00000463440 ANKRD45Q5TZF3 282 aa19.59■□□□□ 0.73
COL1A1-202ENST00000463440 GPAT2Q6NUI2 795 aa19.59■□□□□ 0.73
COL1A1-202ENST00000463440 FBXO46Q6PJ61 603 aaPredicted RBP19.59■□□□□ 0.73
COL1A1-202ENST00000463440 ZNF280CQ8ND82 737 aa19.59■□□□□ 0.73
COL1A1-202ENST00000463440 PARK7Q99497 189 aaKnown RBP19.59■□□□□ 0.73
COL1A1-202ENST00000463440 ARMT1Q9H993 441 aa19.59■□□□□ 0.73
COL1A1-202ENST00000463440 PHIPQ8WWQ0 1821 aa19.59■□□□□ 0.73
COL1A1-202ENST00000463440 ATAD5Q96QE3 1844 aa19.59■□□□□ 0.73
COL1A1-202ENST00000463440 MYH7P12883 1935 aa19.59■□□□□ 0.73
COL1A1-202ENST00000463440 SPP2Q13103 211 aa19.58■□□□□ 0.72
COL1A1-202ENST00000463440 OTOP1Q7RTM1 612 aa19.58■□□□□ 0.72
COL1A1-202ENST00000463440 KBTBD3Q8NAB2 608 aa19.58■□□□□ 0.72
COL1A1-202ENST00000463440 EFCC1Q9HA90 598 aa19.58■□□□□ 0.72
COL1A1-202ENST00000463440 MCM9Q9NXL9 1143 aa19.58■□□□□ 0.72
COL1A1-202ENST00000463440 SUPT16HQ9Y5B9 1047 aaKnown RBP19.58■□□□□ 0.72
COL1A1-202ENST00000463440 GLRX3O76003 335 aaKnown RBP19.57■□□□□ 0.72
COL1A1-202ENST00000463440 KIF22Q14807 665 aa19.57■□□□□ 0.72
COL1A1-202ENST00000463440 SLFNL1Q499Z3 407 aa19.57■□□□□ 0.72
COL1A1-202ENST00000463440 SDR42E1Q8WUS8 393 aa19.57■□□□□ 0.72
COL1A1-202ENST00000463440 RWDD1Q9H446 243 aaPredicted RBP19.57■□□□□ 0.72
COL1A1-202ENST00000463440 DCP1AQ9NPI6 582 aaPredicted RBP19.57■□□□□ 0.72
COL1A1-202ENST00000463440 ATP8A2Q9NTI2 1148 aa19.57■□□□□ 0.72
COL1A1-202ENST00000463440 HPS5Q9UPZ3 1129 aa19.57■□□□□ 0.72
COL1A1-202ENST00000463440 SLC45A1Q9Y2W3 748 aa19.57■□□□□ 0.72
COL1A1-202ENST00000463440 PTPRFP10586 1907 aa19.57■□□□□ 0.72
COL1A1-202ENST00000463440 NAV1Q8NEY1 1877 aa19.56■□□□□ 0.72
COL1A1-202ENST00000463440 GDF11O95390 407 aa19.56■□□□□ 0.72
COL1A1-202ENST00000463440 MX1P20591 662 aa19.56■□□□□ 0.72
COL1A1-202ENST00000463440 LRRFIP1Q32MZ4 808 aaKnown RBP19.56■□□□□ 0.72
COL1A1-202ENST00000463440 TATDN1Q6P1N9 297 aa19.56■□□□□ 0.72
COL1A1-202ENST00000463440 PROCA1Q8NCQ7 364 aaPredicted RBP19.56■□□□□ 0.72
COL1A1-202ENST00000463440 EXOC6Q8TAG9 804 aa19.56■□□□□ 0.72
COL1A1-202ENST00000463440 DDRGK1Q96HY6 314 aa19.56■□□□□ 0.72
COL1A1-202ENST00000463440 WDR18Q9BV38 432 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms